Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	No hit found
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description
Poplar homologues Show only best Show top 10	No hit found
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10032855 pacid=23164829 polypeptide=Lus10032855 locus=Lus10032855.g ID=Lus10032855.BGIv1.0 annot-version=v1.0 ATGGCGTTGGAGTTGGGTTCGGTTTTGGAATCGGGTGTGGTTTCGGCGTTGGATGGGGCTTTGGCGGTGAGTTTCTGTACTACCTTTTCAATTTCCCTTG CACAAGCTTATTGCTTTCCTGGTTGTATGTGTGTGAATTTGGGAGATTCTGCAAATTGCGATAAAGGCATGCCATTGAGTATCTTGGGCCTAGGTGCAGG TGGAGGATGTGGAGTTGGTGTAGGACTGGGATGGGGATTTGGAAGTGCTTTTGGAAGTCATTACAGATCATCTAGACTCACCTTCAACGGCGTAGATTTT GGCAACAAAGGCAAAGGAGGAAGTAGCACTGAGCACAATGACAAGGAGTAA
AA sequence Show only first row Show all	>Lus10032855 pacid=23164829 polypeptide=Lus10032855 locus=Lus10032855.g ID=Lus10032855.BGIv1.0 annot-version=v1.0 MALELGSVLESGVVSALDGALAVSFCTTFSISLAQAYCFPGCMCVNLGDSANCDKGMPLSILGLGAGGGCGVGVGLGWGFGSAFGSHYRSSRLTFNGVDF GNKGKGGSSTEHNDKE

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G27695			glycine-rich protein (.1.2)		Lus10032855 [exp]	0	1
AT2G44850			unknown protein		Lus10028204 [exp]	2.0	0.8767
AT1G32210		ATDAD1	DEFENDER AGAINST APOPTOTIC DEA...		Lus10010413 [exp]	2.0	0.8601
AT5G08290		YLS8	YELLOW-LEAF-SPECIFIC GENE 8, m...		Lus10017390 [exp]	2.4	0.8781
AT4G11600		LSC803, PHGPX, ...	glutathione peroxidase 6 (.1)		Lus10000603 [exp]	6.5	0.8313
AT5G46030			unknown protein		Lus10025438 [exp]	6.7	0.8496
AT2G04520			Nucleic acid-binding, OB-fold-...		Lus10000920 [exp]	7.1	0.8751
AT4G05000		VPS28-2, VPS28-...	vacuolar protein sorting-assoc...		Lus10018442 [exp]	9.4	0.8509
AT1G76200			unknown protein		Lus10012279 [exp]	9.5	0.8533
AT1G03650			Acyl-CoA N-acyltransferases (N...		Lus10025567 [exp]	9.6	0.8122
AT1G29850			double-stranded DNA-binding fa...		Lus10004609 [exp]	10.2	0.8314

Compare expression of checked genes

Lus10032855 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.