Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT4G27660 121 / 5e-35 unknown protein AT5G54150 94 / 1e-24 unknown protein AT2G20310 99 / 2e-24 RIN13 RPM1 interacting protein 13 (.1) AT4G28690 95 / 5e-23 unknown protein AT5G54148 78 / 9e-19 unknown protein
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10015578 [exp] 273 / 3e-95 AT4G27660 111 / 2e-31 unknown protein Lus10025944 [exp] 105 / 1e-26 AT2G20310 143 / 1e-37 RPM1 interacting protein 13 (.1) Lus10014249 [exp] 105 / 1e-26 AT2G20310 141 / 7e-37 RPM1 interacting protein 13 (.1) Lus10000498 [exp] 105 / 2e-26 AT2G20310 124 / 1e-30 RPM1 interacting protein 13 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.015G003200 [exp] 147 / 4e-45 AT4G27660 117 / 3e-33 unknown protein Potri.012G006501 [exp] 132 / 1e-39 AT4G27660 122 / 2e-35 unknown protein Potri.002G255400 [exp] 99 / 2e-24 AT4G28690 138 / 2e-35 unknown protein
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10032928 pacid=23160334 polypeptide=Lus10032928 locus=Lus10032928.g ID=Lus10032928.BGIv1.0 annot-version=v1.0 ATGTCAGACGATGTCACGACTGTACTCCCGCCGGAAGTTGGGATGCCGAGGGCCAACAAGAAACAACCGCCGGAAGATATCATGATCATACCAGACTCAG ATAACGACGGTACTCCGTTAAGACCCATTTTCTGCCTCAAGCTACAAAACAGAATGGACATCGGAAAGTACGACGATATCGATGACTGCTTCATCGTCGA TTTCGGCCCTGACGGCTCCGGCGGCCGCCCCGTCAATCCCAACCTCGAAACCTCCAGCCCAGAAGCCGACGACGTTGTCCTGGTTTCCGAGAAGGGTCCG GTTGCTTGTAGAGATTTCCCGCATTCCAGGTATCAATGTGCCACTTACGCGTTCGACAAAACTCCTCACCAGAAATATTGTCCAAGGTGTTACTGCTATG TATGTGATGTGGCTGCTCCCTGCCAGTTTTGGGAAGTGGGTGCATCTCCGCATTGTCATGCCATCGGGCATGTCCAGAGTTGGAAGGCTGAAAGAGCCAA GATGCGAGGAGTTAAGGTAGTTGATGGTCTTACTGCTGCTGGTCTTGTTTTGCAACGCCATGGTTAG
AA sequence Show only first row Show all	>Lus10032928 pacid=23160334 polypeptide=Lus10032928 locus=Lus10032928.g ID=Lus10032928.BGIv1.0 annot-version=v1.0 MSDDVTTVLPPEVGMPRANKKQPPEDIMIIPDSDNDGTPLRPIFCLKLQNRMDIGKYDDIDDCFIVDFGPDGSGGRPVNPNLETSSPEADDVVLVSEKGP VACRDFPHSRYQCATYAFDKTPHQKYCPRCYCYVCDVAAPCQFWEVGASPHCHAIGHVQSWKAERAKMRGVKVVDGLTAAGLVLQRHG

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT4G27660			unknown protein		Lus10032928 [exp]	0	1
AT3G45980		H2B, HTB9	HISTONE H2B, Histone superfami...		Lus10037371 [exp]	1.4	0.9848
AT5G02560		HTA12	histone H2A 12 (.1.2)		Lus10004945 [exp]	2.4	0.9746
AT5G48480			Lactoylglutathione lyase / gly...		Lus10020399 [exp]	3.5	0.9738
AT2G24440			selenium binding (.1)		Lus10026958 [exp]	3.9	0.9729
AT1G09200			Histone superfamily protein (....		Lus10005270 [exp]	6.9	0.9697
AT2G02540	ZF_HD	ATHB21, ZFHD4, ...	ZINC FINGER HOMEODOMAIN 3, ZIN...		Lus10010693 [exp]	7.3	0.9758
AT2G18350	ZF_HD	ATHB24, ZHD6	ZINC FINGER HOMEODOMAIN 6, hom...		Lus10007147 [exp]	8.8	0.9709
AT3G45980		H2B, HTB9	HISTONE H2B, Histone superfami...		Lus10017292 [exp]	9.9	0.9680
AT2G18500	OFP	ATOFP7, OFP7	ARABIDOPSIS THALIANA OVATE FAM...		Lus10041730 [exp]	10.6	0.9434
AT2G02540	ZF_HD	ATHB21, ZFHD4, ...	ZINC FINGER HOMEODOMAIN 3, ZIN...		Lus10010694 [exp]	14.9	0.9722

Compare expression of checked genes

Lus10032928 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.