Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	No hit found
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10015568 [exp] 106 / 9e-30 ND /
Poplar homologues Show only best Show top 10	No hit found
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10032936 pacid=23160363 polypeptide=Lus10032936 locus=Lus10032936.g ID=Lus10032936.BGIv1.0 annot-version=v1.0 ATGTATGCTATTGATGATTCCATTTTCTTGCTCAGAATCCTCAGCAAGAGAAAACGGAAGGCGTTTCGAAAGAAGGAGCAGATGATCTTATTAGCCAAGT TCCCAAACATAGGCAAGTTAAATGGCTCTAGTGAAGTTTCTGAGAAGCTGCTCAGGAAGAAGGATGTGTGGAAGGTGAGGGACAAGAAAGATAAGCCATG GCTGGCTGTGGCCAAGAAGAAAAAAAAGGGGATTGGCGCACTGAGATCTGAGAATGATCATCATGGTATTGCTAGTGGAGCAAAGACGAAAACTAAAGTC TTCAACTCCCATGTCGGTTCCTCGACTGTGTTTTCCGATGGCAGAAGCTCTGCATCGCCGTTTGATGATGTTTCATGGCTCCAGATCCCCAAGAATGTCG AAGAAAGGCAGCTCATCATCAGTTGTACTCACGAAAGCCTTGTCCAACGGCAAGAAAAGTGGTGA
AA sequence Show only first row Show all	>Lus10032936 pacid=23160363 polypeptide=Lus10032936 locus=Lus10032936.g ID=Lus10032936.BGIv1.0 annot-version=v1.0 MYAIDDSIFLLRILSKRKRKAFRKKEQMILLAKFPNIGKLNGSSEVSEKLLRKKDVWKVRDKKDKPWLAVAKKKKKGIGALRSENDHHGIASGAKTKTKV FNSHVGSSTVFSDGRSSASPFDDVSWLQIPKNVEERQLIISCTHESLVQRQEKW

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
					Lus10032936 [exp]	0	1
AT1G16916			unknown protein		Lus10032325 [exp]	8.5	0.7675
AT1G47710			Serine protease inhibitor (SER...		Lus10002792 [exp]	9.1	0.7625
AT2G44020			Mitochondrial transcription te...		Lus10004534 [exp]	19.6	0.7157
AT1G29850			double-stranded DNA-binding fa...		Lus10004540 [exp]	22.2	0.7509
AT3G19290	bZIP	AREB2, ABF4	ABA-RESPONSIVE ELEMENT BINDING...		Lus10002399 [exp]	25.1	0.7340
AT5G66200		ARO2	armadillo repeat only 2 (.1)		Lus10036897 [exp]	28.9	0.7013
AT4G17890		UBP20, AGD8	ARF-GAP domain 8 (.1.2)		Lus10004561 [exp]	34.6	0.7004
AT3G19553			Amino acid permease family pro...		Lus10009849 [exp]	56.7	0.6762
AT1G10150		ATPP2-A10	Carbohydrate-binding protein (...		Lus10012487 [exp]	57.9	0.6782
AT5G27260			unknown protein		Lus10037335 [exp]	60.2	0.6945

Compare expression of checked genes

Lus10032936 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.