Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT3G51550 649 / 0 FER FERONIA, Malectin/receptor-like protein kinase family protein (.1) AT5G38990 597 / 0 Malectin/receptor-like protein kinase family protein (.1) AT5G28680 577 / 0 ANX2 ANXUR2, Malectin/receptor-like protein kinase family protein (.1) AT3G04690 575 / 0 ANX1 ANXUR1, Malectin/receptor-like protein kinase family protein (.1) AT5G61350 487 / 3e-159 Protein kinase superfamily protein (.1) AT5G54380 483 / 2e-157 THE1 THESEUS1, protein kinase family protein (.1) AT5G59700 472 / 1e-153 Protein kinase superfamily protein (.1) AT3G46290 469 / 3e-152 HERK1 hercules receptor kinase 1 (.1) AT5G39000 384 / 1e-119 Malectin/receptor-like protein kinase family protein (.1) AT4G39110 377 / 5e-117 Malectin/receptor-like protein kinase family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10032971 [exp] 1350 / 0 AT3G51550 706 / 0.0 FERONIA, Malectin/receptor-like protein kinase family protein (.1) Lus10003942 [exp] 1213 / 0 AT3G51550 656 / 0.0 FERONIA, Malectin/receptor-like protein kinase family protein (.1) Lus10016907 [exp] 579 / 0 AT3G04690 967 / 0.0 ANXUR1, Malectin/receptor-like protein kinase family protein (.1) Lus10042537 [exp] 564 / 0 AT3G04690 942 / 0.0 ANXUR1, Malectin/receptor-like protein kinase family protein (.1) Lus10029945 [exp] 555 / 0 AT3G51550 424 / 1e-137 FERONIA, Malectin/receptor-like protein kinase family protein (.1) Lus10042844 [exp] 479 / 3e-156 AT3G46290 1025 / 0.0 hercules receptor kinase 1 (.1) Lus10028140 [exp] 476 / 3e-155 AT3G46290 1024 / 0.0 hercules receptor kinase 1 (.1) Lus10037887 [exp] 467 / 3e-151 AT5G54380 1279 / 0.0 THESEUS1, protein kinase family protein (.1) Lus10039274 [exp] 440 / 3e-141 AT5G24010 997 / 0.0 Protein kinase superfamily protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.016G138700 [exp] 666 / 0 AT3G51550 1252 / 0.0 FERONIA, Malectin/receptor-like protein kinase family protein (.1) Potri.006G110000 [exp] 663 / 0 AT3G51550 1256 / 0.0 FERONIA, Malectin/receptor-like protein kinase family protein (.1) Potri.017G096600 [exp] 654 / 0 AT3G51550 829 / 0.0 FERONIA, Malectin/receptor-like protein kinase family protein (.1) Potri.017G096000 [exp] 644 / 0 AT3G51550 832 / 0.0 FERONIA, Malectin/receptor-like protein kinase family protein (.1) Potri.017G096800 [exp] 638 / 0 AT3G51550 823 / 0.0 FERONIA, Malectin/receptor-like protein kinase family protein (.1) Potri.008G105500 [exp] 630 / 0 AT3G04690 999 / 0.0 ANXUR1, Malectin/receptor-like protein kinase family protein (.1) Potri.010G145600 [exp] 623 / 0 AT3G04690 1027 / 0.0 ANXUR1, Malectin/receptor-like protein kinase family protein (.1) Potri.013G042500 [exp] 596 / 0 AT3G04690 1036 / 0.0 ANXUR1, Malectin/receptor-like protein kinase family protein (.1) Potri.017G097001 [exp] 516 / 3e-172 AT3G51550 506 / 2e-168 FERONIA, Malectin/receptor-like protein kinase family protein (.1) Potri.009G026600 [exp] 496 / 7e-163 AT3G46290 1093 / 0.0 hercules receptor kinase 1 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0202 [flax] [poplar] GBD PF11721 [flax] [poplar] Malectin Malectin domain CL0016 [flax] [poplar] PKinase PF07714 [flax] [poplar] PK_Tyr_Ser-Thr Protein tyrosine and serine/threonine kinase
Representative CDS sequence Show only first row Show all	>Lus10032976 pacid=23160365 polypeptide=Lus10032976 locus=Lus10032976.g ID=Lus10032976.BGIv1.0 annot-version=v1.0 ATGAAGAGATTGGACACACACGTATGTCTCTCTTTTCTTTTACTCGTCCTTTCTATTATCAATCATCTCGCCTCTGCTGCCAAACCAGTGGATAACATAT TCGTGGACTGCGGTTCCAATACCGCCGGAACCGACGACGACGATCTGAATTGGGAGTCGGACGCCACCTCAAAATACCTCCGAGTGGAAGATGATGATAG GACATCAGTCTCTACAACACAAGATACTTCAACTTCCCTCCCATTGGTGCCGTACCGAACAGCCCGGTTGTCTCGCTCTCAATTCACCTACGCCTTCCCC GTCACCTCAGGCCAGAAATTCATCCGCTTCCACTTCTTCCCCGCCAATTACCCACCGGATTTCAACAAATCAGCCGCCTCTTTCTCGGTCAAAGCCGGCA CATTCACCCTCCTCAACAACTTCAGCGCGGACCTCCGCGCACGAGCACTCCACCAAGACGGATTCTACATGGAGTTCTGCTTAAACGCGCAACCAAATCA GCACCTCCTTAACCTAACCTTCGCTCCCACCCCGGGCGCCGGAGCTTACGCTTTCATCAATGGAATTGAAGTTGTCTCCATGCCCACGAATTTATACTAC ACCAACCCGGACGATGCAGGGCCCTCCTCGTTCGGAACTAATCAGCGAATCGAAAATGGCACCGCATTGCAGCTCATGTACAGAGTCAATGTCGGCGGCA GTTACATCTCTCCCAACCGTGACACCAGTATGTATCGGAGATGGGAGTCTGACCTGGACCCCGACGTGTATTTCGTCCCGGCTCCAAGCTCACTTTATAA GAACACCTCAATTCAGCTTGATTACAGGAACAAAGACGAGATTCATCGGGTAGCGGCTCCAGATCCAGTCTACCAAACTGCCCGCGGAATGTCCAACAAC ACCGCCATAATTCTCTCCTACAACCTCACCTGGATGTTTCAGGTTGACCCCTTTTTCACCTATTTCGTCCGGCTCCATTTTTGCGAGTTCCAGCCGGTTA TATCCGACCGCGACAACAGGGCTTTCTGGGTCAACATTATGAATCAAACAGCTCCGCATTTTGTGGATGTCATTCAGCAAGCTGGTGGGAACGGAATCCC AATGTTCAAAGATTACTTGGCGAGAATGGTAGCAGCTGAGAATAAGCATCTCTTTGTCGCTCTTGCTCCTTTCAAGAAGGGGAGCGCCCACGTCAACGCC ATCCTCAATGGAGTTGAAATCTACAAATTAAGCTCCTCCGACAACAATCTAGCCGGACCCAACCCTGACCTGTCGCCGCTTCAATCCCCGTCCTCGTCCT CGTCGAAGTCCGGTAGAAATCAGACTAAATTACTTGTTGCTGTAGCCGGCGGCATTGTTTCATGTCTGCTGGTGCTCTCCCTTTTACTCTTCTTCATCGT TAGGCAGAAAAGGAAAGTTACGGGCCGAAAGCACTGCGACATCGGACGCTCTGCTTCTCCTTCTACAGGGTTTGGAAAACTTTCTTCCATCGAATCTAAG AGCGGGATATCCAAGTACTCATCATCCACGCTGCCTTTGGATCTTTGCCGCCGATTTTCACTAACCGAGATCAAAACTGCTACCCGGGATTTCAACGAAG ATTTCATTATCGGAGTGGGAGGGTTCGGCAACGTCTACAAGGGACTAATCAACGACGGAAGAGCCGGCACCATGGCAAGCGTGGCCATCAAGAGGTTGAA TCCAGGGTCACAGCAAGGCACCAACGAGTTCAAAACGGAGATCGAGATGCTCTCCCAGCTCAGACACATTCACCTCGTATCCCTAATCGGATACTGCTAC GACGAGGGCGAGATGATCCTAGTCTACGAGTACATGTCCAACGGCACACTCCAGGATCACCTCTACAAGACTGATAACCCTCCCATTCCATGGAAGCAAC GGCTGGAGATCTGCATTTGCGCTGCTCGAGGGCTTCACTACCTTCATTGGGGAGCCAACAACAGCATCATTCATCGCGATGTTAAGACTACCAACATCTT GCTGGACGACAAGTGGGTAGCCAAGGTATCCGATTTCGGGCTGTCCAAAGTCGGACCGGGAGCTCCGAATGAGCACGTTAGCACGGTGGTGAAAGGAAGC TTCGGGTACTTGGATCCAGAGTACTACCGCCTACAACGGCTGACAGAGAAATCGGATGTGTACTCATTCGGTGTGGTGTTGTGGGAAGTTCTGTCGGCTC GTCCTTCGATTAATCGGATGGGGAACAACAAGGAGGCGGTGAGCTTGGCGGAGCAGGCAAAGCAAAGTTATCGAAAAGGAAGAGTTAAGGAAATGGTTGA CCCGCATTTGGACGGTGAAATTGGGGAGGAGTGTCTACATAAGTTTGCGGAGGTTGCGAGGAGTTGCTTGAAGGAGAAAGGAGTTGATAGGCCATCGATG GGGGATGTGGTCTGGGGGCTTGAATTTGCCATGGAGTTGCAGGAGAGCGGCGGTGTGGGTATGAAGTTACTAGAGAAGCGAGTTGCGAAAGAATTCCCGG TGATAAATGGTCCGTCGGGAAGCAGTAGCAGTGGTGGTTCAAATATGTTTAGCAGTGAGATGGAGATTGGTTCGCAAATGAATTGGTTCACAGACACGAG TGTGACTAGTACCACAACAAGTGCTGAACATAGCTTCCTAGATCAGTACAGCTCTGAGTCGAGGGCTCATTGA
AA sequence Show only first row Show all	>Lus10032976 pacid=23160365 polypeptide=Lus10032976 locus=Lus10032976.g ID=Lus10032976.BGIv1.0 annot-version=v1.0 MKRLDTHVCLSFLLLVLSIINHLASAAKPVDNIFVDCGSNTAGTDDDDLNWESDATSKYLRVEDDDRTSVSTTQDTSTSLPLVPYRTARLSRSQFTYAFP VTSGQKFIRFHFFPANYPPDFNKSAASFSVKAGTFTLLNNFSADLRARALHQDGFYMEFCLNAQPNQHLLNLTFAPTPGAGAYAFINGIEVVSMPTNLYY TNPDDAGPSSFGTNQRIENGTALQLMYRVNVGGSYISPNRDTSMYRRWESDLDPDVYFVPAPSSLYKNTSIQLDYRNKDEIHRVAAPDPVYQTARGMSNN TAIILSYNLTWMFQVDPFFTYFVRLHFCEFQPVISDRDNRAFWVNIMNQTAPHFVDVIQQAGGNGIPMFKDYLARMVAAENKHLFVALAPFKKGSAHVNA ILNGVEIYKLSSSDNNLAGPNPDLSPLQSPSSSSSKSGRNQTKLLVAVAGGIVSCLLVLSLLLFFIVRQKRKVTGRKHCDIGRSASPSTGFGKLSSIESK SGISKYSSSTLPLDLCRRFSLTEIKTATRDFNEDFIIGVGGFGNVYKGLINDGRAGTMASVAIKRLNPGSQQGTNEFKTEIEMLSQLRHIHLVSLIGYCY DEGEMILVYEYMSNGTLQDHLYKTDNPPIPWKQRLEICICAARGLHYLHWGANNSIIHRDVKTTNILLDDKWVAKVSDFGLSKVGPGAPNEHVSTVVKGS FGYLDPEYYRLQRLTEKSDVYSFGVVLWEVLSARPSINRMGNNKEAVSLAEQAKQSYRKGRVKEMVDPHLDGEIGEECLHKFAEVARSCLKEKGVDRPSM GDVVWGLEFAMELQESGGVGMKLLEKRVAKEFPVINGPSGSSSSGGSNMFSSEMEIGSQMNWFTDTSVTSTTTSAEHSFLDQYSSESRAH

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT3G51550		FER	FERONIA, Malectin/receptor-lik...		Lus10032976 [exp]	0	1
AT1G02820			Late embryogenesis abundant 3 ...		Lus10027986 [exp]	1.4	0.8947
AT4G40080			ENTH/ANTH/VHS superfamily prot...		Lus10023837 [exp]	1.4	0.8951
AT2G46150			Late embryogenesis abundant (L...		Lus10017531 [exp]	2.4	0.8709
AT2G47890	CO	COL13	B-box type zinc finger protein...		Lus10040900 [exp]	3.5	0.8405
AT5G59730		ATEXO70H7	exocyst subunit exo70 family p...		Lus10004917 [exp]	4.9	0.8392
AT3G23880			F-box and associated interacti...		Lus10023239 [exp]	5.7	0.8227
AT2G36430			Plant protein of unknown funct...		Lus10027719 [exp]	8.0	0.8453
AT3G51550		FER	FERONIA, Malectin/receptor-lik...		Lus10032971 [exp]	9.5	0.8146
AT4G12010			Disease resistance protein (TI...		Lus10015350 [exp]	10.1	0.8100
AT2G19130			S-locus lectin protein kinase ...		Lus10024348 [exp]	13.6	0.7923

Compare expression of checked genes

Lus10032976 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.