Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G63160 183 / 9e-57 BT1 BTB and TAZ domain protein 1 (.1) AT3G48360 181 / 4e-56 ATBT2, BT2 BTB and TAZ domain protein 2 (.1) AT5G67480 135 / 4e-38 ATBT4, BT4 BTB and TAZ domain protein 4 (.1.2) AT4G37610 115 / 1e-30 BT5 BTB and TAZ domain protein 5 (.1) AT1G05690 114 / 3e-30 BT3 BTB and TAZ domain protein 3 (.1) AT1G79000 52 / 1e-07 ATHAC1, ATHPCAT2, PCAT2, HAC1 ARABIDOPSIS THALIANA P300/CBP ACETYLTRANSFERASE-RELATED PROTEIN 2, ARABIDOPSIS HISTONE ACETYLTRANSFERASE OF THE CBP FAMILY 1, histone acetyltransferase of the CBP family 1 (.1.2) AT1G16710 47 / 3e-06 HAC12 histone acetyltransferase of the CBP family 12 (.1.2) AT3G12980 41 / 0.0003 HAC5 ,ATHPCAT4 histone acetyltransferase of the CBP family 5 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10013670 [exp] 291 / 3e-99 AT3G48360 371 / 6e-128 BTB and TAZ domain protein 2 (.1) Lus10042082 [exp] 258 / 3e-86 AT3G48360 388 / 1e-134 BTB and TAZ domain protein 2 (.1) Lus10018087 [exp] 249 / 1e-82 AT3G48360 388 / 1e-134 BTB and TAZ domain protein 2 (.1) Lus10019299 [exp] 133 / 4e-37 AT5G67480 487 / 7e-173 BTB and TAZ domain protein 4 (.1.2) Lus10011523 [exp] 129 / 1e-35 AT5G67480 482 / 6e-171 BTB and TAZ domain protein 4 (.1.2) Lus10025196 [exp] 120 / 4e-32 AT5G67480 425 / 9e-149 BTB and TAZ domain protein 4 (.1.2) Lus10033321 [exp] 53 / 6e-08 AT1G79000 1965 / 0.0 ARABIDOPSIS THALIANA P300/CBP ACETYLTRANSFERASE-RELATED PROTEIN 2, ARABIDOPSIS HISTONE ACETYLTRANSFERASE OF THE CBP FAMILY 1, histone acetyltransferase of the CBP family 1 (.1.2) Lus10034780 [exp] 52 / 8e-08 AT1G79000 1715 / 0.0 ARABIDOPSIS THALIANA P300/CBP ACETYLTRANSFERASE-RELATED PROTEIN 2, ARABIDOPSIS HISTONE ACETYLTRANSFERASE OF THE CBP FAMILY 1, histone acetyltransferase of the CBP family 1 (.1.2) Lus10033319 [exp] 51 / 2e-07 AT1G79000 1952 / 0.0 ARABIDOPSIS THALIANA P300/CBP ACETYLTRANSFERASE-RELATED PROTEIN 2, ARABIDOPSIS HISTONE ACETYLTRANSFERASE OF THE CBP FAMILY 1, histone acetyltransferase of the CBP family 1 (.1.2)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.015G087700 [exp] 236 / 2e-77 AT5G63160 404 / 8e-141 BTB and TAZ domain protein 1 (.1) Potri.012G091400 [exp] 232 / 9e-76 AT5G63160 404 / 7e-141 BTB and TAZ domain protein 1 (.1) Potri.007G140400 [exp] 145 / 9e-42 AT1G05690 407 / 3e-141 BTB and TAZ domain protein 3 (.1) Potri.017G009700 [exp] 140 / 8e-40 AT1G05690 451 / 9e-159 BTB and TAZ domain protein 3 (.1) Potri.007G055100 [exp] 124 / 1e-33 AT5G67480 438 / 2e-153 BTB and TAZ domain protein 4 (.1.2) Potri.007G003400 [exp] 52 / 1e-07 AT1G79000 1847 / 0.0 ARABIDOPSIS THALIANA P300/CBP ACETYLTRANSFERASE-RELATED PROTEIN 2, ARABIDOPSIS HISTONE ACETYLTRANSFERASE OF THE CBP FAMILY 1, histone acetyltransferase of the CBP family 1 (.1.2) Potri.014G000500 [exp] 52 / 1e-07 AT1G79000 1829 / 0.0 ARABIDOPSIS THALIANA P300/CBP ACETYLTRANSFERASE-RELATED PROTEIN 2, ARABIDOPSIS HISTONE ACETYLTRANSFERASE OF THE CBP FAMILY 1, histone acetyltransferase of the CBP family 1 (.1.2) Potri.004G104201 [exp] 44 / 5e-05 AT1G79000 860 / 0.0 ARABIDOPSIS THALIANA P300/CBP ACETYLTRANSFERASE-RELATED PROTEIN 2, ARABIDOPSIS HISTONE ACETYLTRANSFERASE OF THE CBP FAMILY 1, histone acetyltransferase of the CBP family 1 (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF02135 [flax] [poplar] zf-TAZ TAZ zinc finger
Representative CDS sequence Show only first row Show all	>Lus10033038 pacid=23177038 polypeptide=Lus10033038 locus=Lus10033038.g ID=Lus10033038.BGIv1.0 annot-version=v1.0 ATGGAGGAACAAGTTCACCTTCCATCAGCTACGGATGTCTGCGGCGCCTCCGAGGAGCATTTCGACAACAACACTTGGCGGAACCTGCCTGAGCCTGACG TCCGCATACTTACTTCCGGCGGCCTCGGCATTCTAGCACACACTGCTGTCTTGGCCGTGGAGAAAACGGAAGGGTGGTTATTCATGCAAGACCATGATCC TTGGCTGAAGCTTGAGATCTTGCAGTTCATTGATGAAGCTGAACTGAGGAAGAAAAAATGTAGAAGGCACAGAGAGGCGCAACGGTTGTACATGGAGCTT GGGGATGCGATGGAATGTCTAGAACACATATGCAGTGAAGGGTGCACAAGCGTTGGGCCGTATGACGCAGAACCAAAGAGGAAGAGACTTTGTAGCAAGT TCTCTATTTGTGAAGGTGTTCAACTATTGATAAAGCATTTTGCTAGTTGTAAGAAGCGGGTTAATGGAGGGTGCTGCCGTTGTAAAAGGATGTTGCAGCT CCTTAGGCTTCACGCTTCAATCTGTGACCAGCACGATTCTTGCAAAGTCCCTCTTTGCAGGCAATTCAAATTGAGAATGCAGCAAGAGAAAAAGGATGAC GTTCCTTGTGGAAGTTGCTAG
AA sequence Show only first row Show all	>Lus10033038 pacid=23177038 polypeptide=Lus10033038 locus=Lus10033038.g ID=Lus10033038.BGIv1.0 annot-version=v1.0 MEEQVHLPSATDVCGASEEHFDNNTWRNLPEPDVRILTSGGLGILAHTAVLAVEKTEGWLFMQDHDPWLKLEILQFIDEAELRKKKCRRHREAQRLYMEL GDAMECLEHICSEGCTSVGPYDAEPKRKRLCSKFSICEGVQLLIKHFASCKKRVNGGCCRCKRMLQLLRLHASICDQHDSCKVPLCRQFKLRMQQEKKDD VPCGSC

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G63160		BT1	BTB and TAZ domain protein 1 (...		Lus10033038 [exp]	0	1
AT2G39210			Major facilitator superfamily ...		Lus10021512 [exp]	1.4	0.9835
AT4G37370		CYP81D8	"cytochrome P450, family 81, s...		Lus10010373 [exp]	2.4	0.9752
AT3G06500		A/N-InvC	alkaline/neutral invertase C, ...		Lus10017095 [exp]	2.4	0.9398
AT3G48360		ATBT2, BT2	BTB and TAZ domain protein 2 (...		Lus10013670 [exp]	3.5	0.9518
AT1G02660			alpha/beta-Hydrolases superfam...		Lus10010031 [exp]	3.9	0.9203
					Lus10036703 [exp]	4.5	0.9505
AT1G72100			late embryogenesis abundant do...		Lus10000723 [exp]	4.6	0.9393
AT3G50940			P-loop containing nucleoside t...		Lus10015802 [exp]	4.9	0.9345
AT1G56220			Dormancy/auxin associated fami...		Lus10020661 [exp]	5.1	0.9275
AT5G47040		LON2	lon protease 2 (.1)		Lus10001084 [exp]	5.5	0.9326

Compare expression of checked genes

Lus10033038 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.