Gene [FLAX] | FIBexDB

Lus10033114 [FLAX]

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JGI Phytozome v13

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Symbol

Arabidopsis homologues

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No hit found

Paralogs

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Gene ID	BLAST score/e-value	At best hit	BLAST score/e-value	TAIR10 short description
Lus10021792 [exp]	173 / 2e-52	ND	/
Lus10011276 [exp]	138 / 3e-40	ND	42 / 2e-04
Lus10014633 [exp]	122 / 2e-35	AT2G04865	61 / 2e-11	Aminotransferase-like, plant mobile domain family protein (.1)
Lus10006165 [exp]	122 / 2e-34	AT5G45260	66 / 5e-12	SENSITIVE TO LOW HUMIDITY 1, RESISTANT TO RALSTONIA SOLANACEARUM 1, ARABIDOPSIS THALIANA WRKY DOMAIN PROTEIN 52, Disease resistance protein (TIR-NBS-LRR class) (.1), Disease resistance protein (TIR-NBS-LRR class) (.2)
Lus10008733 [exp]	119 / 5e-34	ND	/
Lus10022091 [exp]	127 / 6e-34	AT3G23070	860 / 0.0	CRM family member 3A (.1)
Lus10008761 [exp]	120 / 2e-32	AT2G25010	79 / 1e-15	Aminotransferase-like, plant mobile domain family protein (.1)
Lus10004818 [exp]	109 / 2e-28	AT1G17930	56 / 2e-08	Aminotransferase-like, plant mobile domain family protein (.1)
Lus10043226 [exp]	105 / 2e-28	ND	/

Poplar homologues

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No hit found

PFAM info

Representative CDS sequence

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>Lus10033114 pacid=23176954 polypeptide=Lus10033114 locus=Lus10033114.g ID=Lus10033114.BGIv1.0 annot-version=v1.0

ATGAGGAGGCAAGATAAACTGTTAGGTGGCTATGATTCTGATTCTGTTTCGCACCATCCGTTTAGGACTTCTTCAGGGTTGCCCCATGCATCAGCGAGCG

TTGGGGTTACAATAGAGAGAGCTGGTCATTTTGCTCCTTACGAGAGTACACAGGTTGTCCTGATCAAGAAGGAGGTCAGGACTACTGGGTCGGGAAACAT

TTCACGCACGCTGCAGCTTGTTGTGGGGATAGAGGATGGCGGCCCGATGGCTACGCGTGTGATTCCCAATTTCGGCGGTCACATTGCTCATTATCTGTGG

GAGATCGATATAGCTAAGGCTCTCCATATTGTGCCCGTCGGGAATTTGAAGTTACCAGTTGGAGGCACTAGAGGCGGGAATTCTCGATACCCTTGGTTGA

AGGGTCTTGCGATGCATGAGAAGTCGATGATAGCTATTGGGAATGGTTTAGTGGATGTGAATGCCTACAAGTTTTTCACATTTTTTCTGTGTGGTTCGAC

GTTGTTCACTGATAAGATAGCTGATCAGACTCGTCTCGTGTTTTGGGAGTACTTGATGGGGGGTGCCTCGGTGTGCCACGGTATGCTTGGGGGACGGGCG

CGCTAG

AA sequence

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>Lus10033114 pacid=23176954 polypeptide=Lus10033114 locus=Lus10033114.g ID=Lus10033114.BGIv1.0 annot-version=v1.0

MRRQDKLLGGYDSDSVSHHPFRTSSGLPHASASVGVTIERAGHFAPYESTQVVLIKKEVRTTGSGNISRTLQLVVGIEDGGPMATRVIPNFGGHIAHYLW

EIDIAKALHIVPVGNLKLPVGGTRGGNSRYPWLKGLAMHEKSMIAIGNGLVDVNAYKFFTFFLCGSTLFTDKIADQTRLVFWEYLMGGASVCHGMLGGRA

DESeq2's median of ratios [FLAX]

Coexpressed genes

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Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
					Lus10033114 [exp]	0	1

Lus10033114 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.