Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G75860 51 / 4e-07 unknown protein AT2G17787 45 / 5e-05 unknown protein AT4G35940 42 / 0.0005 unknown protein
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10034539 [exp] 461 / 2e-163 AT1G75860 56 / 1e-08 unknown protein Lus10013567 [exp] 151 / 6e-43 AT2G17787 45 / 3e-05 unknown protein Lus10017274 [exp] 96 / 2e-22 AT2G17787 44 / 7e-05 unknown protein
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.002G019200 [exp] 61 / 2e-10 AT1G20100 71 / 6e-14 unknown protein Potri.005G242400 [exp] 58 / 2e-09 AT1G20100 51 / 3e-07 unknown protein
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10033130 pacid=23178035 polypeptide=Lus10033130 locus=Lus10033130.g ID=Lus10033130.BGIv1.0 annot-version=v1.0 ATGGCTCGCTGCTTTCCTTACCCTCTTCCAGAAGGTTATTTGGGGGACGGAGCTTGTGGTGGTCGGTCTCTGTTGGGTCCGATTAAGCCCCATGCTGAAA CGGAGAGAACAGGTCAGGGAAGAAAGGATACTGAAATATCTTTGAAAAGGAAGGGTAGTAGGGGAGATGAGTCTGAAAAAACTCAATCCAAAAAGATTAA GTTCGCCAAAAACGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGACCCCGAGGGTGTAGCTGAAGAATCTGAAAGCAGTGGTGTGACTGAAGAACAC GGTCAACCTTCCTGTCTTCAAAGCCCCTCCCACTCATCCGACTCTGTTAAGGGGACTGGCGATGAATGTCCCACAACTACTGAAGTAAAGAAGTGCAAGA AGTTTCGGATCAAGTTGAATGTATCAAAGCCTAAAGAGCCATTCAACAGTCAACAACCCTCCGTTCCATCAGCTAGTCTTGCCCAGCCAAACGTTGGTAA TCGTGTTGCTGATGTGGGTGTATCTACTTCTGCGTCAGCTCTCGCAAAGAAGAATGACTACGACAACATCCTCAGGACAACACCAAAGGTTGTTGTCAAT CGGGTCTCTGCACTGGATGTTAATCGTGCACATGTTTGTAATCGGGTTTCTGCACCGGATGTGGTTGTTGTCAGTCGGGTCTCTGAACAGGTTGCTGACG TCGGTGTTTCTACTTCTGCAAAGAAGGAAGAAGATATCATCGTGAGGGTTGGGACGACTGTTAGCCATATTTCACGAGATGCGACTAAGGCGAAGAAGTT GTCGAAAAGTGAAGTCTACAATTCTTTAACGAATGGTTGGTCAGCTCCTGCACTTCCGATGTTTCAAACAGAAGCTGAAGATCTTGATTGGATTCTCCCT TCGAAGAAGCAGACTGGAAGAGTCGGTGGCGGTGATGTTAGCAAGGAATCATGCAATGCCAGTGCTTGTGCAACATGGCCTAGAGCCCAGTACATGCCCA GTGTGGACGTCTATGCATTGCCTTATACGATTCCATTCTGA
AA sequence Show only first row Show all	>Lus10033130 pacid=23178035 polypeptide=Lus10033130 locus=Lus10033130.g ID=Lus10033130.BGIv1.0 annot-version=v1.0 MARCFPYPLPEGYLGDGACGGRSLLGPIKPHAETERTGQGRKDTEISLKRKGSRGDESEKTQSKKIKFAKNGGGGGGGGGGGDPEGVAEESESSGVTEEH GQPSCLQSPSHSSDSVKGTGDECPTTTEVKKCKKFRIKLNVSKPKEPFNSQQPSVPSASLAQPNVGNRVADVGVSTSASALAKKNDYDNILRTTPKVVVN RVSALDVNRAHVCNRVSAPDVVVVSRVSEQVADVGVSTSAKKEEDIIVRVGTTVSHISRDATKAKKLSKSEVYNSLTNGWSAPALPMFQTEAEDLDWILP SKKQTGRVGGGDVSKESCNASACATWPRAQYMPSVDVYALPYTIPF

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G75860			unknown protein		Lus10033130 [exp]	0	1
AT4G32020			unknown protein		Lus10001936 [exp]	1.0	0.9348
AT1G18210			Calcium-binding EF-hand family...		Lus10018012 [exp]	2.4	0.9309
AT3G16720		ATL2	TOXICOS EN LEVADURA 2 (.1)		Lus10037490 [exp]	2.8	0.9165
AT3G56400	WRKY	ATWRKY70, WRKY7...	ARABIDOPSIS THALIANA WRKY DNA-...		Lus10014177 [exp]	4.0	0.9035
AT3G27540			beta-1,4-N-acetylglucosaminylt...		Lus10035231 [exp]	5.1	0.8975
AT1G78080	AP2_ERF	CAF1, RAP2.4, W...	wound induced dedifferentiatio...		Lus10022497 [exp]	5.3	0.9042
AT4G32030			unknown protein		Lus10001935 [exp]	5.5	0.9060
AT5G54165			unknown protein		Lus10023231 [exp]	5.5	0.9154
AT2G23810		TET8	tetraspanin8 (.1)		Lus10019965 [exp]	7.9	0.9212
AT1G75860			unknown protein		Lus10034539 [exp]	10.2	0.8930

Compare expression of checked genes

Lus10033130 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.