Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	No hit found
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10019378 [exp] 42 / 5e-05 ND /
Poplar homologues Show only best Show top 10	No hit found
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10033191 pacid=23178092 polypeptide=Lus10033191 locus=Lus10033191.g ID=Lus10033191.BGIv1.0 annot-version=v1.0 ATGCAAGTCTGCTACAAGTGTGGTATGGTGGACCACTTCTTTGACCTCTGCCCCAAAGCTGCAGCTCTGGTGAGTGACCCGTCAGGCCGGAACTCTTGGA TGGTGGCAGATCAGCTAAAGTTTCGCAGTTTGCATTCGGAAGCTCTATTGCCTATGCAACCCTTCACCCGAGAAAATCTTCGGGAGATCCTAGACTCCGA ACTTGCTGCTGGCCAGAGAGGGGTTGAGAAACGCCGCCAGTGTTCTTTCCCGATGGATGACGGCCAGTGCAAGCAGTTCGAGCCCACGAACCAGGAGGCA GATTCCAGCAAGCATTTGGGCCCTGATCATTCCAAGGGCTCAAGTTCGTCCAAGGCTCCACTCACTTTTGAGGCCAAGGTATCAAAACTATTCGCCGGCC CGGCAGCTGTGACCTCTCTCCCACCCGTGGGCCCACTGGCTTCCATGCCTGATCACGTCGAGTTTCTGCTTCCATCACCCTTTGTCTTCGTAAGGAACCG AGGTCCTCATCCAAATCTCTGGTGCAATCCAAGCGACTGA
AA sequence Show only first row Show all	>Lus10033191 pacid=23178092 polypeptide=Lus10033191 locus=Lus10033191.g ID=Lus10033191.BGIv1.0 annot-version=v1.0 MQVCYKCGMVDHFFDLCPKAAALVSDPSGRNSWMVADQLKFRSLHSEALLPMQPFTRENLREILDSELAAGQRGVEKRRQCSFPMDDGQCKQFEPTNQEA DSSKHLGPDHSKGSSSSKAPLTFEAKVSKLFAGPAAVTSLPPVGPLASMPDHVEFLLPSPFVFVRNRGPHPNLWCNPSD

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
					Lus10033191 [exp]	0	1
					Lus10028940 [exp]	1.4	0.9417
AT4G16295		SPH1	S-protein homologue 1 (.1)		Lus10018785 [exp]	2.4	0.9242
AT1G03890			RmlC-like cupins superfamily p...		Lus10033893 [exp]	3.5	0.8911
AT5G16990			Zinc-binding dehydrogenase fam...		Lus10007853 [exp]	4.2	0.8478
AT5G05320			FAD/NAD(P)-binding oxidoreduct...		Lus10033385 [exp]	8.0	0.8759
AT2G43820		SGT1, ATSAGT1, ...	UDP-glucose:salicylic acid glu...		Lus10017826 [exp]	9.5	0.8688
AT1G52820			2-oxoglutarate (2OG) and Fe(II...		Lus10023160 [exp]	9.5	0.8692
AT4G15480		UGT84A1	UDP-Glycosyltransferase superf...		Lus10002810 [exp]	11.8	0.7678
AT5G67360		ARA12	Subtilase family protein (.1)		Lus10006700 [exp]	12.1	0.8605
AT2G40220	AP2_ERF	ATABI4, GIN6, S...	SUCROSE UNCOUPLED 6, SUGAR-INS...		Lus10009834 [exp]	13.4	0.8056

Compare expression of checked genes

Lus10033191 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.