Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	No hit found
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description
Poplar homologues Show only best Show top 10	No hit found
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10033284 pacid=23172217 polypeptide=Lus10033284 locus=Lus10033284.g ID=Lus10033284.BGIv1.0 annot-version=v1.0 ATGAATTACAGAGTGGATATATGTATAACATTCGTCATTCCCTTCATACGTTTGTTACCATTTATGTTTCTGGTTCTGTCAAATGTGCAAGCCTTAGCAA TTTGCATGGGAGAAAGCCCGGATGACCAGGAGAAGGACATGGCCCAGATTCTTGCTACTGCAACTAAGGACGTGGCGGCACTCCGGATCACCGAGGAGAA GAAGCGGCGACGTTCGGAGGCACCGGAGGCGGACTTCATGGATACGACCGAACCCACTGATCAAACGCCGTCCAAGTCACCGACGAAGCCGGGACAAGTG AGGCTGCGAGTGGCATCCACGGAAGTAGCTCGGCAACATGGAGCCCGTTAA
AA sequence Show only first row Show all	>Lus10033284 pacid=23172217 polypeptide=Lus10033284 locus=Lus10033284.g ID=Lus10033284.BGIv1.0 annot-version=v1.0 MNYRVDICITFVIPFIRLLPFMFLVLSNVQALAICMGESPDDQEKDMAQILATATKDVAALRITEEKKRRRSEAPEADFMDTTEPTDQTPSKSPTKPGQV RLRVASTEVARQHGAR

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
					Lus10033284 [exp]	0	1
AT5G45380		ATDUR3	DEGRADATION OF UREA 3, solute:...		Lus10033882 [exp]	1.7	0.9528
AT1G73110			P-loop containing nucleoside t...		Lus10024092 [exp]	2.4	0.9572
					Lus10038743 [exp]	4.7	0.9530
AT4G29035			Plant self-incompatibility pro...		Lus10022825 [exp]	5.9	0.9485
AT1G75250	MYB	RSM3, ATRL6	RADIALIS-LIKE SANT/MYB 3, RAD-...		Lus10026009 [exp]	6.3	0.9346
AT3G19550			unknown protein		Lus10013900 [exp]	6.5	0.9346
AT5G46090			Protein of unknown function (D...		Lus10018635 [exp]	6.9	0.9479
AT5G64440		ATFAAH	fatty acid amide hydrolase (.1...		Lus10035974 [exp]	7.2	0.9500
AT5G51160			Ankyrin repeat family protein ...		Lus10029006 [exp]	8.0	0.8815
AT1G15170			MATE efflux family protein (.1...		Lus10029694 [exp]	8.9	0.9158

Compare expression of checked genes

Lus10033284 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.