Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	No hit found
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10034761 [exp] 250 / 5e-82 AT5G66900 197 / 1e-54 Disease resistance protein (CC-NBS-LRR class) family (.1)
Poplar homologues Show only best Show top 10	No hit found
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10033298 pacid=23172247 polypeptide=Lus10033298 locus=Lus10033298.g ID=Lus10033298.BGIv1.0 annot-version=v1.0 ATGAGAGCTAAGGAGTCTTTCAGATCTTCAGGTGTTTCCAGTTTCGAGGGGCAAGATTCTTTTGAGAGTCAGCTGGATGAAGAAAATGAAGTCAACAAAT ACTCCAACGACCAAGGCTCATTTCCACACCTAGCCTCAAATACTGAAGATGCTAGCCTTTCTGGCGAGAAGAGCGAATCGCACAAGTCAGATGACGATGA TGACCCTTGTCAGGTTTCAGTTGGTCTTCCAAACACTGGCAGTGACAGTAGTAAAGATGACATCTTCGGTGATAAGCAGTTTATTGTGCAACAAGATATT GTAGAGGCTTTAGCCATTCTTCAAAACAACACAGGAAGCATTGATCAAGGAAACGACTTGGTGATGAAAGTCGGAGGAACAAATTACCCAAGTTCTGAAA TTATGCCAATTGCGATGCAAAGTTAA
AA sequence Show only first row Show all	>Lus10033298 pacid=23172247 polypeptide=Lus10033298 locus=Lus10033298.g ID=Lus10033298.BGIv1.0 annot-version=v1.0 MRAKESFRSSGVSSFEGQDSFESQLDEENEVNKYSNDQGSFPHLASNTEDASLSGEKSESHKSDDDDDPCQVSVGLPNTGSDSSKDDIFGDKQFIVQQDI VEALAILQNNTGSIDQGNDLVMKVGGTNYPSSEIMPIAMQS

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
					Lus10033298 [exp]	0	1
AT5G66900			Disease resistance protein (CC...		Lus10033299 [exp]	1.4	0.8831
AT2G39435			Phosphatidylinositol N-acetygl...		Lus10030320 [exp]	1.7	0.9009
AT4G01710		ARPC5, CRK	CROOKED, ARP2/3 complex 16 kDa...		Lus10012040 [exp]	4.6	0.8822
AT4G12020	WRKY	MEKK4, MAPKKK11...	MAPK/ERK KINASE KINASE 4, MITO...		Lus10016282 [exp]	5.1	0.8672
					Lus10043073 [exp]	8.8	0.8422
AT2G32760			unknown protein		Lus10037826 [exp]	10.5	0.8697
AT5G17460			unknown protein		Lus10009117 [exp]	10.6	0.8523
AT3G18215			Protein of unknown function, D...		Lus10009640 [exp]	10.7	0.8748
AT2G19260			RING/FYVE/PHD zinc finger supe...		Lus10020162 [exp]	11.8	0.8810
AT1G03670			ankyrin repeat family protein ...		Lus10020209 [exp]	13.1	0.8410

Compare expression of checked genes

Lus10033298 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.