Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G79020 535 / 0 Enhancer of polycomb-like transcription factor protein (.1) AT1G16690 497 / 8e-175 Enhancer of polycomb-like transcription factor protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10034778 [exp] 788 / 0 AT1G79020 577 / 0.0 Enhancer of polycomb-like transcription factor protein (.1) Lus10008985 [exp] 50 / 3e-06 AT5G04670 325 / 2e-99 Enhancer of polycomb-like transcription factor protein (.1) Lus10028841 [exp] 47 / 3e-05 AT1G66950 1374 / 0.0 ATP-binding cassette G39, pleiotropic drug resistance 11 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.014G000600 [exp] 602 / 0 AT1G79020 561 / 0.0 Enhancer of polycomb-like transcription factor protein (.1) Potri.010G235900 [exp] 52 / 5e-07 AT5G04670 518 / 2e-173 Enhancer of polycomb-like transcription factor protein (.1) Potri.008G024300 [exp] 42 / 0.0006 AT5G04670 488 / 3e-162 Enhancer of polycomb-like transcription factor protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF10513 [flax] [poplar] EPL1 Enhancer of polycomb-like
Representative CDS sequence Show only first row Show all	>Lus10033318 pacid=23172156 polypeptide=Lus10033318 locus=Lus10033318.g ID=Lus10033318.BGIv1.0 annot-version=v1.0 ATGAGTAGGCTGTCATTTAGGCCGCGACCGCTCGACATAACCAAGAAGCTCCCCATTTTGAAGTCGGTTAAGGATTTTGAAGACGATGATTCGACTCCCA CTGCTATTCGCAACTCTCAGCTGCTCCGCATTTCCGCTGCTGACTTCGAGAGTGAGGTGCATCATCCTCACGTTCCTACCAAGAAATTAGTTTCTGAAAT TCCCACGCCGCAATTTGACGATGTTGATACTTACGAGAGAGATTATGGCCGCACGTTCTTTCAGCCCAATTCTTATATTCGAGCAAGGGGAGCTCGAGCT GAGATTGGCGAATTTGTTGAATATGATCTTGACAATGAAGACGAGGACTGGCTTCAAGACTTCAATAGAGACAAGGATAACCTTCCTCCTGAAAAGTTTG AAGTTCTTCTATTTAAGCTGGAGGCATTAGATCATAAGGCCCGAGAAAGAGCTGGAGTTATAACACCAACTCTTGGTTCTCCAATCCCTGTTCTTCTACA AATTGATGCTGCTATCGAGGCGCTGCAAGCTCATGCTCAAACTCAGTCAATCACATATGGGCTTCTCCGGTCTGTTTATAATTATTGGAAAGAGAAGCGT GAAAGATGGCAGAAGCCTGTTTTACGCCGTCTTCAGCCTCCTCCCCCAGTTAATGATACAAACCCATACAATGTCTTCAGGCCACGGGAAAGAGCACACA GGCTACGAAGGATGCAGAGGAGGGAAAATAATGTACAATCATTTGAGAAGTTGCGCCAGGTCCGGCGCAATCTTGAGCAGGCCAAGACCATACTTGAGGC TCTGATTAAGAGAGAAGAGAAGAAAAGAGAAGTGATGGAGAATGAAGTAAGTCTGCAGAGGATCCAAATCAAGTACAAGCACGAAACTGAGCTCCTCGAG GACAGCTTAACTTTTCCCGGGTTTCAACCCATCTCTTCCAAGTTTGCATCTAGTGAAGATGAAATTCTGGAGTCAGACGACTTCGCCAACAGCCGTCCAC GAACATGGCCTCCTCTTCTGATCCACAATCCACCTTTGACAGATTCCAACATTCTCAACTTCCCTGCTGCAACCATGAAGCAAGAGCTACGAAGGAGGCA TGGACCTGACGGCTGGCTCAACAAAATGGATCCAAATGAACCAGTTTTATTGTTCACAAAGCCATTAGTACCGGAGAAGCTGGCATTTGCGGGCATTCAA CCACCAGTGGATCCGTCACCACCGAGTAGGGATGGTAGTGGATCATCAGTCGGCTATAGATTCCGAGGGAGGATGGGTCGCGGTGGGCGACTCGTATTTG ATAGATGGAACCCACTTTCCCAATCTCCAATTGATTTAGGCAACACTCTATACATGGCCCCGAGACCCCGAGCCTCAACTTTTTACAATTAA
AA sequence Show only first row Show all	>Lus10033318 pacid=23172156 polypeptide=Lus10033318 locus=Lus10033318.g ID=Lus10033318.BGIv1.0 annot-version=v1.0 MSRLSFRPRPLDITKKLPILKSVKDFEDDDSTPTAIRNSQLLRISAADFESEVHHPHVPTKKLVSEIPTPQFDDVDTYERDYGRTFFQPNSYIRARGARA EIGEFVEYDLDNEDEDWLQDFNRDKDNLPPEKFEVLLFKLEALDHKARERAGVITPTLGSPIPVLLQIDAAIEALQAHAQTQSITYGLLRSVYNYWKEKR ERWQKPVLRRLQPPPPVNDTNPYNVFRPRERAHRLRRMQRRENNVQSFEKLRQVRRNLEQAKTILEALIKREEKKREVMENEVSLQRIQIKYKHETELLE DSLTFPGFQPISSKFASSEDEILESDDFANSRPRTWPPLLIHNPPLTDSNILNFPAATMKQELRRRHGPDGWLNKMDPNEPVLLFTKPLVPEKLAFAGIQ PPVDPSPPSRDGSGSSVGYRFRGRMGRGGRLVFDRWNPLSQSPIDLGNTLYMAPRPRASTFYN

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G79020			Enhancer of polycomb-like tran...		Lus10033318 [exp]	0	1
AT5G13020		AtEML3, ACK1	EMSY-like 3, Emsy N Terminus (...		Lus10031223 [exp]	1.7	0.8393
AT5G52030			TraB family protein (.1.2)		Lus10015005 [exp]	2.2	0.8125
AT5G25150		TAF5	TBP-associated factor 5 (.1)		Lus10024447 [exp]	3.0	0.8349
AT3G26990			ENTH/VHS family protein (.1)		Lus10020327 [exp]	3.7	0.8376
AT5G01270		CPL2, ATCPL2	carboxyl-terminal domain (ctd)...		Lus10027766 [exp]	6.6	0.7548
AT1G02840		ATSRP34, SR1, S...	Serine/Arginine-Rich Protein S...		Lus10008218 [exp]	8.5	0.8150
AT5G13020		AtEML3, ACK1	EMSY-like 3, Emsy N Terminus (...		Lus10031799 [exp]	9.2	0.8105
AT4G36650		ATPBRP	plant-specific TFIIB-related p...		Lus10024022 [exp]	10.6	0.7960
AT5G22120			unknown protein		Lus10004788 [exp]	11.7	0.7652
AT5G22220	E2F_DP	ATE2FB, E2F1	E2F transcription factor 1 (.2...		Lus10005209 [exp]	13.4	0.7853

Compare expression of checked genes

Lus10033318 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.