Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	No hit found
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description
Poplar homologues Show only best Show top 10	No hit found
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10033375 pacid=23172222 polypeptide=Lus10033375 locus=Lus10033375.g ID=Lus10033375.BGIv1.0 annot-version=v1.0 ATGGAGGAGAGCGAAGGAGGATTGGGGGCAGGCAGAATGGCTTTTCGGCCTACTGCTGTAACCAAGCAATTTTCGATAACTTTTTCTCCAAGCAAAACAA CCTTGTGGGTACGCTGCTGGGTTCTAGGCCTACCATATGACATCCTGGCTAGATACTGCTTGCAAGGTGGAGAGGTTATGTCTAGATGTCTCTGCCTTCA CGGAGTTGTCCAGCCTAGACGTCCGATGACCAACAGTGAGAGAGTTCCGATCGTCAGGATTGAACGTTGTGATGTTCAAAGATCAAATAAAGAGCTGACA AGAACCGGCCCGACTCTACTTAGTCCCAACCTGAGCCAATCCTATCAAAAATTTAAATTGACAAGAATGGAGAGCAGGTGTAAAAAGGAAAAGGGGAGGA AACCTTTCTACAGAATCACGAACTCTGCCTTCTGTGGATCTGTTGGTTTCTCCATTGATCGATTAGATTCGTCTCCGTCCTACTCTTACTCGACGGAGAT ACGGAATACTTAG
AA sequence Show only first row Show all	>Lus10033375 pacid=23172222 polypeptide=Lus10033375 locus=Lus10033375.g ID=Lus10033375.BGIv1.0 annot-version=v1.0 MEESEGGLGAGRMAFRPTAVTKQFSITFSPSKTTLWVRCWVLGLPYDILARYCLQGGEVMSRCLCLHGVVQPRRPMTNSERVPIVRIERCDVQRSNKELT RTGPTLLSPNLSQSYQKFKLTRMESRCKKEKGRKPFYRITNSAFCGSVGFSIDRLDSSPSYSYSTEIRNT

---

DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

---

Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
					Lus10033375 [exp]	0	1
AT5G38560		AtPERK8	proline-rich extensin-like rec...		Lus10003066 [exp]	4.6	0.6388
AT2G19880			Nucleotide-diphospho-sugar tra...		Lus10034973 [exp]	16.4	0.6707
AT1G01950		AtKINUb, ARK2	Arabidopsis thaliana KINESIN U...		Lus10038696 [exp]	21.1	0.6235
AT1G79650		AtAO1, RAD23B, ...	RADIATION SENSITIVE23B, Arabid...		Lus10026110 [exp]	27.3	0.6368
AT2G19160			Core-2/I-branching beta-1,6-N-...		Lus10025464 [exp]	28.3	0.6076
AT1G58520		RXW8	lipases;hydrolases, acting on ...		Lus10010365 [exp]	37.0	0.5949
AT2G38760		ANN3, ANNAT3	annexin 3 (.1)		Lus10039547 [exp]	37.1	0.5820
AT5G57330			Galactose mutarotase-like supe...		Lus10041629 [exp]	37.5	0.5770
AT5G66650			Protein of unknown function (D...		Lus10005312 [exp]	38.4	0.5920
					Lus10016642 [exp]	42.4	0.5792

Compare expression of checked genes

Lus10033375 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.