Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G13750 599 / 0 ZIFL1 zinc induced facilitator-like 1 (.1.2.3) AT5G13740 550 / 0 ZIF1 zinc induced facilitator 1 (.1) AT3G43790 532 / 0 ZIFL2 zinc induced facilitator-like 2 (.1.2.3) AT5G13940 92 / 3e-19 aminopeptidases (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10034847 [exp] 742 / 0 AT5G13750 664 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10033392 [exp] 735 / 0 AT5G13750 659 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10033338 [exp] 714 / 0 AT5G13750 646 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10034794 [exp] 698 / 0 AT5G13750 645 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10037341 [exp] 676 / 0 AT5G13750 640 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10035766 [exp] 654 / 0 AT5G13750 622 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10034846 [exp] 599 / 0 AT5G13750 600 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10037425 [exp] 560 / 0 AT3G43790 687 / 0.0 zinc induced facilitator-like 2 (.1.2.3) Lus10000256 [exp] 344 / 6e-117 AT5G13750 318 / 3e-108 zinc induced facilitator-like 1 (.1.2.3)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.008G010600 [exp] 629 / 0 AT5G13750 630 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Potri.016G024400 [exp] 582 / 0 AT5G13750 588 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Potri.006G026200 [exp] 573 / 0 AT5G13750 572 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Potri.010G248401 [exp] 174 / 1e-51 AT5G13750 144 / 2e-41 zinc induced facilitator-like 1 (.1.2.3)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0015 [flax] [poplar] MFS PF07690 [flax] [poplar] MFS_1 Major Facilitator Superfamily
Representative CDS sequence Show only first row Show all	>Lus10033391 pacid=23172252 polypeptide=Lus10033391 locus=Lus10033391.g ID=Lus10033391.BGIv1.0 annot-version=v1.0 ATGGCAGCAGCAGAAGAAGACTATTCTGCTTCTGCAGTTCCTCTGCTACAAAAGCACTACTATGACAACTGTCCAGGGTGTAAGGTGGATCAACGCAAAT ACTTGAAAAGAGGATTTCCCATTGGAGAGTTTGTTTCAATATGGATCGTCGTGCTTTGTTCATCTCTCCCAATATCGTCTCTCTTTCCCTATCTTTATTT CATGGTTAGGGATTTCAAGATTGCAGAAAAGGAGGAAGACATTGGTTACTATGCTGGATACATTGGATCCTCATTCATGTTTGGAAGAGCTTCGACTTCT GTCTTCTGGGGGATAGTTGCTGATCGCTACGGTCGAAAGCCTGTTATACTTTTCGGAACTTCAGCTGTGGCGATTTTCAACACTCTGTTCGGCCTCAGTA CAAACTTATGGATGGCAGTTATCTCAAGATTCTTACTCGGGTCCATGAATGGTTTACTTGGAGCAATTATGGTTGGGGCCTATGCAACCGAACTTTTCAG ACCGGAACATCAAGCATTGGGTTTGTCAACGATTTCAACAGCATGGGGTATAGGGTTGATTGTTGGCCCTGCTTTAGGAGGTTTCCTCGCCCAGCCAGCA GTGAATTATCCAAACTTGTTCTCCAAGGATTCTTTATTTGGGAGGTTTCCCTACTTCTTACCTTCCCTTGCTATTTCGGTTTTCGCTTTTGGAGTAACAA TTGCTTCTTTATGGCTCCCGGAAACGTTGCATAACCACAAGGAAAATATGAAACCAAGCGATGTTTTGGGAAGCGGACCTAGCAGCAGTGTTGGATCCAA TGGAAATGACGAGGAATCGGTTATGATCGAGCAGCCAGAGACGTCGAAACTAGCTTCCAAGAAAAGTCTCCTAAAAAATTGGCCACTCATGTCGTCTATC ATTGTATATTGCATCTTCTCGCTTCATGATATGGCTTACTCCGAGATATTTTCATTATGGGCAGTGAGCCCCAGAAAGCTGGGCGGACTTGGTTACTCCA CACAGAATGTAGGTGAAGTTCTAGCAGTCACAGGTGCTGGACTGCTTGTGTTCCAACTCGCCCTGTATCCATATGCAGAGAGGCTTCTTGGACCTGTAAT GGTGTGCCGTATTGCTGCTGCATTGTGCATTCCGTTGCTGTCGAGTTACCCATTTATGGCCAAGTTGTCGGGTTTCAGTCTGAGTATACTGATAAACTGC GCATCTGTGTTGAAGAGTGCCCTATCAGTGTCGATTGATACGGGCTTGTATATACTGCAAAACAATGCAGTGGAGCAGCATCAGAGAGGAGCTGCTAATG GGATAACAATGACAGCGATGTCTTTGTTTAAAGCAGTTGGTCCAGCTGGAGGAGGTTCTCTGTTTTCATGGGCAGAGACGCGTCAGGATGCAGGGTTTCT TCCAGGAACTCAAATGGTGTTTTTTGTACTGAACTTGGTGGAAGGGCTTGGCTTGTTGTTAACGTTTAGGCCTTTCTTATCCTACCCTCCCCGCTCCCAA TGA
AA sequence Show only first row Show all	>Lus10033391 pacid=23172252 polypeptide=Lus10033391 locus=Lus10033391.g ID=Lus10033391.BGIv1.0 annot-version=v1.0 MAAAEEDYSASAVPLLQKHYYDNCPGCKVDQRKYLKRGFPIGEFVSIWIVVLCSSLPISSLFPYLYFMVRDFKIAEKEEDIGYYAGYIGSSFMFGRASTS VFWGIVADRYGRKPVILFGTSAVAIFNTLFGLSTNLWMAVISRFLLGSMNGLLGAIMVGAYATELFRPEHQALGLSTISTAWGIGLIVGPALGGFLAQPA VNYPNLFSKDSLFGRFPYFLPSLAISVFAFGVTIASLWLPETLHNHKENMKPSDVLGSGPSSSVGSNGNDEESVMIEQPETSKLASKKSLLKNWPLMSSI IVYCIFSLHDMAYSEIFSLWAVSPRKLGGLGYSTQNVGEVLAVTGAGLLVFQLALYPYAERLLGPVMVCRIAAALCIPLLSSYPFMAKLSGFSLSILINC ASVLKSALSVSIDTGLYILQNNAVEQHQRGAANGITMTAMSLFKAVGPAGGGSLFSWAETRQDAGFLPGTQMVFFVLNLVEGLGLLLTFRPFLSYPPRSQ

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G13750		ZIFL1	zinc induced facilitator-like ...		Lus10033391 [exp]	0	1
AT2G17080			Arabidopsis protein of unknown...		Lus10023960 [exp]	4.6	0.8302
AT1G63030	AP2_ERF	DDF2�ADREB1E	DWARF AND DELAYED FLOWERING 2,...		Lus10017829 [exp]	9.3	0.7548
AT3G21330	bHLH	bHLH087	basic helix-loop-helix (bHLH) ...		Lus10003500 [exp]	9.5	0.7921
AT3G53710		AGD6	ARF-GAP domain 6 (.1.2)		Lus10029174 [exp]	13.7	0.8181
AT5G53070			Ribosomal protein L9/RNase H1 ...		Lus10022383 [exp]	14.1	0.8392
AT4G27750		ISI1	IMPAIRED SUCROSE INDUCTION 1, ...		Lus10017985 [exp]	24.3	0.8028
AT2G27760		IPPT, ATIPT2	tRNAisopentenyltransferase 2 (...		Lus10006281 [exp]	41.7	0.8101
AT1G20770			unknown protein		Lus10013217 [exp]	46.6	0.8080
AT5G15220			Ribosomal protein L27 family p...		Lus10007170 [exp]	50.8	0.8018
AT5G01470			S-adenosyl-L-methionine-depend...		Lus10002489 [exp]	53.3	0.7949

Compare expression of checked genes

Lus10033391 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.