Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G13750 610 / 0 ZIFL1 zinc induced facilitator-like 1 (.1.2.3) AT3G43790 556 / 0 ZIFL2 zinc induced facilitator-like 2 (.1.2.3) AT5G13740 555 / 0 ZIF1 zinc induced facilitator 1 (.1) AT5G13940 90 / 9e-19 aminopeptidases (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10034847 [exp] 900 / 0 AT5G13750 664 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10033338 [exp] 771 / 0 AT5G13750 646 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10034794 [exp] 762 / 0 AT5G13750 645 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10033391 [exp] 756 / 0 AT5G13750 642 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10037341 [exp] 701 / 0 AT5G13750 640 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10035766 [exp] 673 / 0 AT5G13750 622 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10034846 [exp] 642 / 0 AT5G13750 600 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10037425 [exp] 576 / 0 AT3G43790 687 / 0.0 zinc induced facilitator-like 2 (.1.2.3) Lus10000256 [exp] 329 / 3e-111 AT5G13750 318 / 3e-108 zinc induced facilitator-like 1 (.1.2.3)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.008G010600 [exp] 657 / 0 AT5G13750 630 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Potri.016G024400 [exp] 610 / 0 AT5G13750 588 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Potri.006G026200 [exp] 602 / 0 AT5G13750 572 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Potri.010G248401 [exp] 187 / 1e-56 AT5G13750 144 / 2e-41 zinc induced facilitator-like 1 (.1.2.3)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0015 [flax] [poplar] MFS PF07690 [flax] [poplar] MFS_1 Major Facilitator Superfamily
Representative CDS sequence Show only first row Show all	>Lus10033392 pacid=23172082 polypeptide=Lus10033392 locus=Lus10033392.g ID=Lus10033392.BGIv1.0 annot-version=v1.0 ATGGCAGCAGCAGAAGAGTATACAGTTCCATTGTTAGACAAGCAGTATTATGAAAATTGTCCAGGTTGTAAGGTCGATCACCAGAAATATTTGAAAAGAG GATTGCCTATCCGGGAGTTTCTTTCCATATGGATTGTTGTGCTTTGTACAGCTCTTCCAATATCGTCTCTCTTTCCCTATCTTTATTTCATGGTTAGGGA TTTCAAGATTGCAGAAAAAGAGGAAGACATTGGTTACTATGCTGGATATATTGGGTCCTCGTTTATGTTCGGTAGAGCTTTGACTTCTGTTTTCTGGGGA CTAGTAGCTGATCGCTATGGTCGAAAGCCAGTTATACTTTTTGGAACTTCCTCTGTGGTGATTTTCAACACTCTCTTCGGCCTCAGTACAAACTTTTGGA TGGCTATTGTCTCAAGATTCTTACTTGGAAGCTTGAATGGTTTACTTGGACCAATAAAGGCGTATGCAAGCGAACTTTTCAGAGAGGAACATCAAGCATT GGGATTGTCAACGATTTCAACAGCATGGGGTATAGGATTGATTATTGGCCCAGCATTAGGAGGTTTCCTCGCCCAGCCAGCAGTGAATTACCCAACCCTG TTCTCCGAGGATTCTTTCTTTGGGAGGTTCCCCTACTCCTTGCCCTCCCTCGCCATTTCGGTGTTTGCTCTTGGAGTAACAATCGCTTCTTTCTGGCTTC CGGAAACTTTGCATAACCACAAGGAAAATACGAAACCATGTGACCACTCTTCCGATGCTTCGGAAACTGCAACTGGCAGCTGTGGTGGATTAAAGGAAGG CGATGAGGAGTCAGCGATTGAGCCAGAGAAACCTGCTCCCAAGACAAGCCTCATAAAAAATTGGCCACTAATGTCATCTATCATCGTATATTGCATCTTC TCACTTCATGATATGGCTTACACGGAGATATTTTCGTTATGGGCAGTCAGCCCCAGAAAGCTTGGTGGACTTAGCTATTCCACGCGGGATGTTGGTGAAG TGCTAGCAGTTTCAGGTGCTGGACTGCTTGTGTTCCAACTGGCCCTGTATCCATATGCGGAGAGGCTTTTTGGACCTGTGATGGTGAGCCGTATTGCTGC TGTATTATCCATTCCGTTGTTGGCAAGTTACCCATATCTTTCAAAGTTGACGGGTATCACTCTGAGTATACTGGTAAACTGCGCATCTGTATTGAAGAAT CTACTATCAGTATCGATTGTAACGGGCTTGTTTATTCTGCAAAACAATGCAGTGGAGCAGCATCAGAGAGGAGCTGCTAACGGGATATCAATGACAGCAA TGTCTCTGTTTAAAGCTGTTGGTCCAGCTGGAGGAGGTTCTCTGTTTTCATGGGCAGAGACACGTCAGGATGCAGGGTTCCTTCCAGGAACCCAAATGGT GTTCTTTATACTCAACTTGGTGGAGGGGCTTGGCTTGTTGTTCTTGTTCAGGCCTTTCCTATCCCACCCTCGCCGCCGGTAG
AA sequence Show only first row Show all	>Lus10033392 pacid=23172082 polypeptide=Lus10033392 locus=Lus10033392.g ID=Lus10033392.BGIv1.0 annot-version=v1.0 MAAAEEYTVPLLDKQYYENCPGCKVDHQKYLKRGLPIREFLSIWIVVLCTALPISSLFPYLYFMVRDFKIAEKEEDIGYYAGYIGSSFMFGRALTSVFWG LVADRYGRKPVILFGTSSVVIFNTLFGLSTNFWMAIVSRFLLGSLNGLLGPIKAYASELFREEHQALGLSTISTAWGIGLIIGPALGGFLAQPAVNYPTL FSEDSFFGRFPYSLPSLAISVFALGVTIASFWLPETLHNHKENTKPCDHSSDASETATGSCGGLKEGDEESAIEPEKPAPKTSLIKNWPLMSSIIVYCIF SLHDMAYTEIFSLWAVSPRKLGGLSYSTRDVGEVLAVSGAGLLVFQLALYPYAERLFGPVMVSRIAAVLSIPLLASYPYLSKLTGITLSILVNCASVLKN LLSVSIVTGLFILQNNAVEQHQRGAANGISMTAMSLFKAVGPAGGGSLFSWAETRQDAGFLPGTQMVFFILNLVEGLGLLFLFRPFLSHPRRR

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G13750		ZIFL1	zinc induced facilitator-like ...		Lus10033392 [exp]	0	1
AT2G20080			unknown protein		Lus10012982 [exp]	1.7	0.9415
AT4G32300		SD2-5	S-domain-2 5 (.1)		Lus10002917 [exp]	3.2	0.9293
AT5G02230			Haloacid dehalogenase-like hyd...		Lus10024382 [exp]	4.1	0.9137
AT5G06300		LOG7	LONELY GUY 7, Putative lysine ...		Lus10012436 [exp]	5.2	0.9267
AT1G48960			Adenine nucleotide alpha hydro...		Lus10038945 [exp]	6.3	0.9097
AT3G01900		CYP94B2	"cytochrome P450, family 94, s...		Lus10012531 [exp]	6.3	0.9185
AT5G13700		ATPAO1, APAO	polyamine oxidase 1 (.1)		Lus10039599 [exp]	6.5	0.9359
AT3G54850		ATPUB14	plant U-box 14 (.1)		Lus10037970 [exp]	9.9	0.9275
AT5G65980			Auxin efflux carrier family pr...		Lus10012708 [exp]	10.6	0.9306
AT5G13750		ZIFL1	zinc induced facilitator-like ...		Lus10034847 [exp]	15.8	0.9339

Compare expression of checked genes

Lus10033392 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.