Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G10530 74 / 3e-14 Concanavalin A-like lectin protein kinase family protein (.1) AT5G55830 66 / 1e-11 Concanavalin A-like lectin protein kinase family protein (.1) AT5G65600 64 / 8e-11 Concanavalin A-like lectin protein kinase family protein (.1) AT1G70110 63 / 1e-10 Concanavalin A-like lectin protein kinase family protein (.1) AT4G02410 59 / 2e-09 Concanavalin A-like lectin protein kinase family protein (.1) AT2G37710 58 / 4e-09 RLK receptor lectin kinase (.1) AT5G06740 56 / 2e-08 Concanavalin A-like lectin protein kinase family protein (.1) AT3G45390 52 / 4e-07 Concanavalin A-like lectin protein kinase family protein (.1) AT5G60270 52 / 4e-07 Concanavalin A-like lectin protein kinase family protein (.1) AT4G04960 52 / 5e-07 Concanavalin A-like lectin protein kinase family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10033778 [exp] 530 / 0 AT5G10530 92 / 4e-20 Concanavalin A-like lectin protein kinase family protein (.1) Lus10014649 [exp] 491 / 2e-175 AT5G10530 91 / 8e-20 Concanavalin A-like lectin protein kinase family protein (.1) Lus10033776 [exp] 380 / 1e-131 AT2G37710 91 / 8e-20 receptor lectin kinase (.1) Lus10014651 [exp] 377 / 3e-130 AT2G37710 96 / 3e-21 receptor lectin kinase (.1) Lus10014652 [exp] 374 / 3e-129 AT5G10530 92 / 4e-20 Concanavalin A-like lectin protein kinase family protein (.1) Lus10033781 [exp] 284 / 4e-95 AT5G10530 99 / 4e-23 Concanavalin A-like lectin protein kinase family protein (.1) Lus10033782 [exp] 281 / 1e-86 AT5G10530 351 / 2e-108 Concanavalin A-like lectin protein kinase family protein (.1) Lus10033777 [exp] 153 / 4e-46 AT4G02410 49 / 9e-08 Concanavalin A-like lectin protein kinase family protein (.1) Lus10014650 [exp] 131 / 1e-36 ND /
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.001G283866 [exp] 116 / 2e-28 AT5G10530 478 / 3e-160 Concanavalin A-like lectin protein kinase family protein (.1) Potri.001G283208 [exp] 116 / 2e-28 AT5G10530 478 / 3e-160 Concanavalin A-like lectin protein kinase family protein (.1) Potri.001G283212 [exp] 114 / 1e-27 AT5G10530 385 / 3e-124 Concanavalin A-like lectin protein kinase family protein (.1) Potri.001G283400 [exp] 110 / 3e-26 AT5G10530 494 / 6e-167 Concanavalin A-like lectin protein kinase family protein (.1) Potri.001G262866 [exp] 107 / 3e-25 AT5G10530 384 / 1e-124 Concanavalin A-like lectin protein kinase family protein (.1) Potri.007G004200 [exp] 101 / 2e-23 AT5G10530 570 / 0.0 Concanavalin A-like lectin protein kinase family protein (.1) Potri.001G283204 [exp] 99 / 2e-22 AT5G10530 472 / 3e-159 Concanavalin A-like lectin protein kinase family protein (.1) Potri.001G283700 [exp] 97 / 5e-22 AT5G10530 497 / 7e-168 Concanavalin A-like lectin protein kinase family protein (.1) Potri.001G283200 [exp] 97 / 8e-22 AT5G10530 382 / 8e-125 Concanavalin A-like lectin protein kinase family protein (.1) Potri.007G004500 [exp] 96 / 1e-21 AT5G10530 725 / 0.0 Concanavalin A-like lectin protein kinase family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0004 [flax] [poplar] Concanavalin PF00139 [flax] [poplar] Lectin_legB Legume lectin domain
Representative CDS sequence Show only first row Show all	>Lus10033779 pacid=23172774 polypeptide=Lus10033779 locus=Lus10033779.g ID=Lus10033779.BGIv1.0 annot-version=v1.0 ATGGAAGTTGGAACAAGCATGATCGTCAATATCATCACCGTGTTTACTTGGTACCTCTTCATATCAATATGCGAAACGGCGCCCTTGTCCTTAAACTACA CCAACTTCGACAAGTGCGGCGACTCCCTCAAATTCTTTGAAACCGCAGCTTGCGGAGATTCAGGGCTAGAACTCACCAACTCTGACTACTCCGTAACAGG GCAGGTCCATTACTCCAAACCAATGCGCCTATGGGACGCCTCCACTGGCAACCTTACCAATTTCACTACCACATTCTCCTTCTCAATGGACAACGACAAC GGCACCTATTCCTGTGACGGTATAGCCTTCTTCCTCGCCTCCATCAATTACACCACTCCCACCGTCAATGCATCACATGGCCTTTTAGGCCTGGTAGCCA CTGAGCACATGTTCAATTCGAAGGGGAATCCCTTCGTGGCGGTAGAGTTCGATACCTTTTATAACCCTTGTTGCGACAGCTTACCTCGTGGCCACGTTGG CATTAATATCAATTCCATCAAGTCTGTCGCCAACAAGATGTGGCAGAGCTACGCGAATAGGACCATCATGTCAGCCACCGTGTCTTACAAAGCCAAGAAC CTGTGTGTAGAGTTCATAGGGCTCAATGAGAAGACGGCACCTGGCAAAGAACAAACAGTGACGATTGATGTTCACGGGAATACACTATGCTACGAATTGG ATTTGAAGGATTATCTGACCGAGTGGGCTTTATTCGGCTTCTCCGGATCAACGGGGCAAAAATACCAGACTCAGACGCTCAAGATGTGGACGTTTTACTC CGAGTTAGACTCGGAAGGTGGTCCCAGCCTAGACAAATTGGAAGGCAAGAAAAGCAACAAGAGCGTGATTATTGGATTGGCGGCCGGAATAATTGGTGGT TTTGCAATACTTATATTGGCCGGTACGGCAATTTATTCTCGATACAATAAGAAGCCAACACACGAGTATCGTTCTGATTCGGGATGCCGATCCCCAGGCG GTTTCCTCACTACAAGAAAGGGCCGTTCGGTTACTCTAGGGAAAGTGACTAAATAG
AA sequence Show only first row Show all	>Lus10033779 pacid=23172774 polypeptide=Lus10033779 locus=Lus10033779.g ID=Lus10033779.BGIv1.0 annot-version=v1.0 MEVGTSMIVNIITVFTWYLFISICETAPLSLNYTNFDKCGDSLKFFETAACGDSGLELTNSDYSVTGQVHYSKPMRLWDASTGNLTNFTTTFSFSMDNDN GTYSCDGIAFFLASINYTTPTVNASHGLLGLVATEHMFNSKGNPFVAVEFDTFYNPCCDSLPRGHVGININSIKSVANKMWQSYANRTIMSATVSYKAKN LCVEFIGLNEKTAPGKEQTVTIDVHGNTLCYELDLKDYLTEWALFGFSGSTGQKYQTQTLKMWTFYSELDSEGGPSLDKLEGKKSNKSVIIGLAAGIIGG FAILILAGTAIYSRYNKKPTHEYRSDSGCRSPGGFLTTRKGRSVTLGKVTK

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G10530			Concanavalin A-like lectin pro...		Lus10033779 [exp]	0	1
AT4G13530			unknown protein		Lus10003531 [exp]	1.4	0.8788
AT3G10572		APEM9	ABERRANT PEROXISOME MORPHOLOGY...		Lus10021597 [exp]	2.0	0.8688
AT2G17787			unknown protein		Lus10013567 [exp]	4.1	0.8882
AT1G13750			Purple acid phosphatases super...		Lus10036902 [exp]	7.1	0.8717
AT1G49950	MYB	ATTRB1, TRB1	telomere repeat binding factor...		Lus10025203 [exp]	8.0	0.8448
AT4G24020		NLP7	NIN like protein 7 (.1)		Lus10001810 [exp]	8.5	0.8337
AT2G39435			Phosphatidylinositol N-acetygl...		Lus10030320 [exp]	9.2	0.8592
AT1G04420			NAD(P)-linked oxidoreductase s...		Lus10021866 [exp]	15.5	0.7551
AT2G23940			Protein of unknown function (D...		Lus10028450 [exp]	18.7	0.8457
AT4G16770			2-oxoglutarate (2OG) and Fe(II...		Lus10004746 [exp]	22.5	0.8408

Compare expression of checked genes

Lus10033779 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.