Lus10033928 [FLAX]

| External link |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Symbol | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
Arabidopsis homologues
|
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
Paralogs
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
Poplar homologues |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
| PFAM info |
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
Representative CDS sequence |
>Lus10033928 pacid=23172833 polypeptide=Lus10033928 locus=Lus10033928.g ID=Lus10033928.BGIv1.0 annot-version=v1.0
ATGGGTGAAGGTGATTGTAATTTGTCGAATTCCGTGCTTGTTGAAGCTAACCTAGAGTTGCAGGAAGGTTTGCCAGAGGGAGGGTCTAGACCTAGGGCTG
TGAAGATGGGGAGCGAGGACAAGAAGAAGCCTGGGGTTAAGAAGAGATTTAAGTCAATGATGAAGAGTGGTGTGGATTCTGATGACGATGAACCGATTGG
GAGTTTGCTGAAGATGAAGCCTAGGGACCCTAAGAAGGGTAAGACGGTGTCCGGCAAGGCTTCAAAGGCTGGAAAAGTAATTGCTAAAGATGTTGAATTT
GGTGGGATGGATGATACATTAGCTAGTTTGAGGAAGAAATTGAAAGGTCCTAAGAAAGACATTGGATCTGTTGGAGCTAGGTGTTCAGATGGTGTTGTGG
GGAAAGGGGTTGGAAACAAGCGCAAGAAGAAAGCAAAACTTGGCGAAGATGCAATGAAATTAGAGTGTGGCGAAGGTAGCAAAGCTATAGGACCTATGGA
TGTTTGCTTCCAAGTTAAGAAACGTGAAGGGACATTGGGTGGGGAAACTTCTATGCATTCTTCAGATGTGAAACTGGTTGAGTCTCAGTCGGTTTCTGGA
GCACAGTCTTGCTCAGATCTGCATTACGAACCGAACAGAAGAACCCAACTTTTAGCGAATGGGATAAGCCCTACTTATCGAAGTAGTTTAGATTCTGCGT
CTGAACAATGTAGGATATTGAAAAACCAGATGCATCAAGATGGTGTTTTTGATAGGATCAAAGATGATAAAAGGTTCGATTCTGGGGTCTTAGATTTTGT
GGAAAGAGCTGAGGCAGATCCCTGTTGCTCTCACAAAATTTGCGATGATAATTGCTCTTTTTCAGAACAGAAAGGTAGTTCCAACAATCAAACATTTGAA
GATGGTGGACAGCCTTCCAGAGACAGCATATTGGTTCCTGCGGTTCATGGAGTTGCTTATCCCAAATCTTCTTCTATGCAGAATACGACCACATGTAGTA
TTGCTGAATTCAATTCCAAGAGTACGTGCACAAAGACGTTGGATGAGAAATTTGAGAATGCCATAGCTGAGCCTGTGGTAAATGGTTCTGGTGAAAGAGA
AATTCTGTCAACCGTTGATGACAATGTGTTGTTGAATCATCCAAGTGATGTCTCTCCCGATCGTATTCGGGCGATAGAAACTGTTGAACTGGGGAGTCTG
CCTGTTGAAGTCAAGTGTGAAAAGGATTCTCTCAGCCAACACCTATATACTGCCCATCCTTCTCGTTCCCATGTAGCAGACTCCAAATTCATGTTAGCAG
ATGTTGAGGAACCTTTTAATCATAATGATACCTTACTTGATGGCCATGATATAGTTTCTGTTTCTCCTAAAAGAGAAGCAGCTAAAACACCTGGTGGTAG
CTCAACCCCGATAGATGAAACAGCCCGTGAAGTTCAGAAATCTGAATCTAATCTCCCGATGAGCTGCAGAGAGAATTCTCTGGATATGGATGTTGATCCA
CACAACTCCACTGCATCCATTCAAAAGGGAAGCCCCGGTTTGCTACAAAATCAACTTTCTCACAATGAAACCAAACAACATTGTGCTCCAGGCCATGAAC
ATCATTCCATTAATGAAAGAGTTGATGGAGGCTCTCCTGGATCTTTAGCAGCAGAGGAAAATTGCAGCTTTCAGGATGATACAGCATCTGTTCCTGATTC
TGAAATCAAAGACGGAAAATTATCAGCTAAGCAACGTGCTGTGCGGCAAGCAAAAAAGCGGAGGCATGAAGACATGGCTTATGAAGGGGATGTTGATTGG
GAAGTTCTAGTAAATGGGCAGAGATTTCTGGATGAGGAAATTTTGGACAATTCGAGAACTTACAGAATCAGAGAAAAGTTTGATTCCTCATCAGTAAGTG
TTTCAGAGGTTGAGAATGGTGGAGCTGCTGCAGTGTCTGCTGGACTGAAATCCCACGCTGCTGGTCCAGTTGAGAAAATAAAATTCAGAGATATCTTGAA
ACGCAAGTCTGGTATCCAAGAATATCTAGAATGCAGGAATAAGATCTTAAGTCTCTGGAGCAAGGATGTTACTCGTATATTGCCACTTTCTGAATGTGGT
GTCACCGATATACCTTCCGAGGCTGAATCTCAAGGTGCTTCACTAATTAGAGAAGTGTATTCGTATCTTGACCAAAGTGGATATATAAATGTTGGGATTG
CCTATGAGAAAAAGAAAGCCCAACCAGGTGCGAAGCATAATTATACGCTTTGTGGAGGGAAAGGTCTTGGTGGGAGTCCTAGCACCTCAGTTGCTGAAAT
GGATGACGGAGTCTCCTTCATCCTTGGTCAGGTCAAGGGTCGTCAGACTTCAATAGAGGTTAAGGATAGAGTCAGGAATGATTGCGATAACCAAGGGTCA
GAAGGAGAACTTGTTACATCTAAGATAAGGATATTTAATGTCCCAAAACCTGAAGAGCTTCTATCTGATGATATCCAGCAAAACACTACTGGCGAACCCA
GATCATCTGATGATGTTGTCTCTGCTATAACTCCTCAGTTAAGAGATGACCAGCAAAGTGGGCAATCTTCTCAAAATGATATAGAGAGATGCGACTGTAT
GCCGTGTGATTCTCAAAATAAAAAGAGAATCTTAGTTATTGGTGCTGGTCCTGCTGGATTAACAGCTGCACGGCATCTACAGCGGCAGGGTTTCCATGTT
ACTATAATTGAGGCGCGAAGTAGGATAGGCGGCCGTGTCCATACAGATCGGTCATCCTTTTCAGTTCCAGTAGATCTTGGTGCCAGCATTATTACTGGTG
TTGAGGCTGATGTTGCGACTGAGAGGAGACCCGACCCTTCCTCTTTGATCTGTGCTCAGCTGGGCCTTGAGTTGACGGTTCTAAACAGCGACTGTCCACT
TTATGATATTGTGACGGGAGAAAAAGTGCCTACTGACTTGGATGAAGCATTGGAGGCAGAATTCAACAGTCTTCTTGATGACATGGTACCACTCATCTCA
CAGAAGGGGGAACTTGCTCTGAAGATGTCTCTGGAAGCTGGATTAGAATATGCCCTTATGAAGCGGCGCTTAGCACATCTGAGGTCAGATATGGAAGGAA
TGGTATTGCAAGACTTTTCATGTGTTTCTACACAATGTAGTGCTGAAGAAGGGGCTCCAGAAGAAGGGGCTACCCCGAAAAGTTCTAGTGAAGAGATTTT
AACTGCTTCTGAAAGGAGAGTTATGGATTGGCATTTTGCTAATTTGGAGTATGGCTGTGCCACTTTGCTGAAGCAAGTGTCACTTTCGCATTGGAATCAG
GATGATGTATATGGAGGATTTGGAGGAGCTCATTGCATGATTAAGGGGGGTTACAGTAATGTTGTGGAATCTCTTGCCGAAGGACTGGTTATTCAACTGA
ACCATGTAGTTACTGAGATTTCATATGGTTCCATGGACACGGGTACAAATGTTTCAAAAGTAAAAGTTTCCACATCAAATGGCACCGAGTTCAGTGGAGA
TGCTGTTCTTGTTACAGTGCCTCTTGGGTGTTTGAAAGCAGAAAGCATAAAGTTTTCCCCTTCCTTACCTCAATGGAAACAGTCTTCCATTCAGAGACTT
GGTTATGGAGTCCTGAATAAAGTAGTTCTGGAATTTGAACGAGTTTTCTGGGATGATTCTGTGGATTACTTTGGGGCGACAGCAGAGGACACCGACAGTA
GAGGGAACTGCTTTATGTTCTGGAATGTACGGAAAACTGTGGGAGCACCTGTTCTTATTGCCTTAGTTGTTGGCAAGGCTGCTATTGATGGCCAAAGTAC
ATGCTCATCAGATCACGTTAGTCATGCGGTGAAGACTCTTCGCAAACTTTTTGGAGTAGATTTAGTGCCAGATCCAGTTGCTTCAGTGGTGACTGATTGG
GGTAGAGATCCTTTCAGTTATGGTGCTTACTCTTATGTTGCCATAGGTTCATCTGGAGAAGACTATGATATATTGGGTAGACCAGTTGAAAACTGCTTAT
TTTTTGCTGGTGAAGCTACCTGCAAGGAGTATCCTGATACAGTTGGTGGTGCTATGATGAGTGGCCTTCGGGAGGCAGTACGGATAATTGACATAATAAG
TACCGGAAATGATTACACTGCTGAAGCAGAGGCTCTGGAGGCCGCAAAAAGACGGTTGGAACTTGAAAGAGATGAAGTTAGAGACATAATGAAGAGGCTT
GAAGCTATGGAATTATATACTGTCATCTCCGAGAGTTCAGTAGCTTTACTACAGGAGATGTTTTTTGGTGCAAAAACCACTGCAGGAAGACTGCACCTTG
CCAAGAAGTTGTTGAGTCTTCCTGCTGAAACCTTGAAGTCCTTTGCTGGTACCAAAAAAGGGTTATCGACCCTCAACTCCTGGATACTGGACTCGATGGG
GAAGGATGGTACACAGCTTTTGCGTCATTGTGTTCGCATTCTTGTGCTGGTATCAACAGACTTACTTGCAGTACGTTTGTCAGGCATTGGGAAGACAGTC
AAAGAAAAAGTTTGTGTGCATACCAGTCGTGATATTCGTGCCATAGCAAGTCAGCTCGTTAGCGTCTGGCTTGAAGTGTTCCGCAGGGAGAAAGCTTCAA
ATCGTTTGAAGTTATCTCGACAAGCCACTGCACTTGATTCTTCAAGGAGAAAGTCCGTTTTTAATCTGCTTACAGGGAAGCCACCTCTAAGTAGTCATCT
TAATGGTCCGGAAAATAGAGGGGGCTTGCACTTATCTGCATCCGCTGCTGCTAGCCCATTGTTATCGGATACTAACATGAAGAATGTGAATGGTGAGTTA
GTTAAGCATCAAATGAAGGCATCAGGACTGAAATCAAGGTCCCAAGATTCCATGAGCAGAGCTGGGTTCGAGATGAAGGAGAAAGGTAAATTTGCCCTGT
CAGAAGAAGAAAAGGCAGCATTAGCTGCAGCTGAGGCTGCACAAGCTGCAGCTCGTGCAGCTGCTGAGGCTTATGCTAAGTGCAACACAATGGTGCACCT
TCCTAAGATACCATCATTTCACAAGTTTGCAAAACGGGAACAATATCCCCCGATGGATGAATATGATTCTAGGAAAAAATGGTCTAGTGGGGTCTTTGGG
GGACAAGACTGTACATCTGAGATAGACTCGAGGAACTGCAGAGTTAGGAACTGGCCAGTTGATTTTTCCGCTACTTGTGAGAACTTCAGTAATTCCAGAT
TGTCGATCGATAACTTATCTCATAGAAGCCATTCAAACGAAATAGCCTCCCGTATGAACTTGGGAGAGCAGTCTGGAGAAAGTGCGGCTACTGGCAGCAG
TCTGTATACAAAAGCATGGGTCGATACAGCCGATGTTGGTGCTGTCAAGGGTTATCAAGCCATTGAGAGATGGCAATCTCAAGCAGCTGCTGCTGATTCA
GAATTTTACCATCCTGATTTGCATATAAACGATGAAGAGCATTCAAATACCAGTTCAAGACCACCTGCCTGGAGGAATGATAGACAAGCAAATGAGAGCT
CTGTCTCACAAGTTACTGTAAACAAGGAGACTCTGAAGAGCCACTCTCGTAGTGCTGACCGAATTAAACAGGCGGTTGTGGATTTTGTTGCATCATTACT
CATGCCTGTTTACAAAGCACACAAAATTGACAGGGATGGATATAAATCTATAATGAAGAAATGTGCCACAAAGGTGATGGAGCGGGCTACTGATGCCGAA
AAAGCAATGTCTGTTTCTGAATTTCTTGATTCCAAACGCAAGAATAAGCCGCCACAGCCTCTTTCTGACCGCATTGTGCACGGATTGGCGCCCCTCTGGG
AAGCTGACACTGTGGAGGCTTTCGTTGACAGAGGAATAGAGTACTTCGGGTTGGTTCAGTCCATGGAGGGCCTGTTTCGACAGTTTATGCACTAG
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
AA sequence
|
>Lus10033928 pacid=23172833 polypeptide=Lus10033928 locus=Lus10033928.g ID=Lus10033928.BGIv1.0 annot-version=v1.0
MGEGDCNLSNSVLVEANLELQEGLPEGGSRPRAVKMGSEDKKKPGVKKRFKSMMKSGVDSDDDEPIGSLLKMKPRDPKKGKTVSGKASKAGKVIAKDVEF
GGMDDTLASLRKKLKGPKKDIGSVGARCSDGVVGKGVGNKRKKKAKLGEDAMKLECGEGSKAIGPMDVCFQVKKREGTLGGETSMHSSDVKLVESQSVSG
AQSCSDLHYEPNRRTQLLANGISPTYRSSLDSASEQCRILKNQMHQDGVFDRIKDDKRFDSGVLDFVERAEADPCCSHKICDDNCSFSEQKGSSNNQTFE
DGGQPSRDSILVPAVHGVAYPKSSSMQNTTTCSIAEFNSKSTCTKTLDEKFENAIAEPVVNGSGEREILSTVDDNVLLNHPSDVSPDRIRAIETVELGSL
PVEVKCEKDSLSQHLYTAHPSRSHVADSKFMLADVEEPFNHNDTLLDGHDIVSVSPKREAAKTPGGSSTPIDETAREVQKSESNLPMSCRENSLDMDVDP
HNSTASIQKGSPGLLQNQLSHNETKQHCAPGHEHHSINERVDGGSPGSLAAEENCSFQDDTASVPDSEIKDGKLSAKQRAVRQAKKRRHEDMAYEGDVDW
EVLVNGQRFLDEEILDNSRTYRIREKFDSSSVSVSEVENGGAAAVSAGLKSHAAGPVEKIKFRDILKRKSGIQEYLECRNKILSLWSKDVTRILPLSECG
VTDIPSEAESQGASLIREVYSYLDQSGYINVGIAYEKKKAQPGAKHNYTLCGGKGLGGSPSTSVAEMDDGVSFILGQVKGRQTSIEVKDRVRNDCDNQGS
EGELVTSKIRIFNVPKPEELLSDDIQQNTTGEPRSSDDVVSAITPQLRDDQQSGQSSQNDIERCDCMPCDSQNKKRILVIGAGPAGLTAARHLQRQGFHV
TIIEARSRIGGRVHTDRSSFSVPVDLGASIITGVEADVATERRPDPSSLICAQLGLELTVLNSDCPLYDIVTGEKVPTDLDEALEAEFNSLLDDMVPLIS
QKGELALKMSLEAGLEYALMKRRLAHLRSDMEGMVLQDFSCVSTQCSAEEGAPEEGATPKSSSEEILTASERRVMDWHFANLEYGCATLLKQVSLSHWNQ
DDVYGGFGGAHCMIKGGYSNVVESLAEGLVIQLNHVVTEISYGSMDTGTNVSKVKVSTSNGTEFSGDAVLVTVPLGCLKAESIKFSPSLPQWKQSSIQRL
GYGVLNKVVLEFERVFWDDSVDYFGATAEDTDSRGNCFMFWNVRKTVGAPVLIALVVGKAAIDGQSTCSSDHVSHAVKTLRKLFGVDLVPDPVASVVTDW
GRDPFSYGAYSYVAIGSSGEDYDILGRPVENCLFFAGEATCKEYPDTVGGAMMSGLREAVRIIDIISTGNDYTAEAEALEAAKRRLELERDEVRDIMKRL
EAMELYTVISESSVALLQEMFFGAKTTAGRLHLAKKLLSLPAETLKSFAGTKKGLSTLNSWILDSMGKDGTQLLRHCVRILVLVSTDLLAVRLSGIGKTV
KEKVCVHTSRDIRAIASQLVSVWLEVFRREKASNRLKLSRQATALDSSRRKSVFNLLTGKPPLSSHLNGPENRGGLHLSASAAASPLLSDTNMKNVNGEL
VKHQMKASGLKSRSQDSMSRAGFEMKEKGKFALSEEEKAALAAAEAAQAAARAAAEAYAKCNTMVHLPKIPSFHKFAKREQYPPMDEYDSRKKWSSGVFG
GQDCTSEIDSRNCRVRNWPVDFSATCENFSNSRLSIDNLSHRSHSNEIASRMNLGEQSGESAATGSSLYTKAWVDTADVGAVKGYQAIERWQSQAAAADS
EFYHPDLHINDEEHSNTSSRPPAWRNDRQANESSVSQVTVNKETLKSHSRSADRIKQAVVDFVASLLMPVYKAHKIDRDGYKSIMKKCATKVMERATDAE
KAMSVSEFLDSKRKNKPPQPLSDRIVHGLAPLWEADTVEAFVDRGIEYFGLVQSMEGLFRQFMH
|
DESeq2's median of ratios [FLAX]
Coexpressed genes
Lus10033928 coexpression network
*The number of genes in the network is adjusted within 50 genes.*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.