Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G18940 503 / 3e-180 Mo25 family protein (.1.2) AT5G47540 247 / 1e-79 Mo25 family protein (.1) AT4G17270 245 / 4e-79 Mo25 family protein (.1) AT2G03410 204 / 4e-63 Mo25 family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10012762 [exp] 636 / 0 AT5G18940 512 / 0.0 Mo25 family protein (.1.2) Lus10010497 [exp] 251 / 3e-81 AT5G47540 594 / 0.0 Mo25 family protein (.1) Lus10027342 [exp] 250 / 6e-81 AT5G47540 592 / 0.0 Mo25 family protein (.1) Lus10017565 [exp] 250 / 9e-81 AT5G47540 593 / 0.0 Mo25 family protein (.1) Lus10039045 [exp] 216 / 1e-67 AT5G47540 517 / 0.0 Mo25 family protein (.1) Lus10041405 [exp] 213 / 1e-65 AT5G47540 446 / 3e-157 Mo25 family protein (.1) Lus10036523 [exp] 207 / 4e-63 AT5G47540 446 / 1e-156 Mo25 family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.010G028700 [exp] 530 / 0 AT5G18940 469 / 5e-167 Mo25 family protein (.1.2) Potri.008G198900 [exp] 515 / 0 AT5G18940 436 / 5e-154 Mo25 family protein (.1.2) Potri.016G011100 [exp] 245 / 6e-79 AT5G47540 589 / 0.0 Mo25 family protein (.1) Potri.002G222800 [exp] 244 / 1e-78 AT5G47540 458 / 1e-162 Mo25 family protein (.1) Potri.010G155400 [exp] 244 / 1e-78 AT5G47540 588 / 0.0 Mo25 family protein (.1) Potri.014G162100 [exp] 246 / 2e-78 AT5G47540 461 / 1e-162 Mo25 family protein (.1) Potri.006G014800 [exp] 242 / 6e-78 AT5G47540 569 / 0.0 Mo25 family protein (.1) Potri.019G057100 [exp] 190 / 3e-57 AT5G47540 411 / 5e-144 Mo25 family protein (.1) Potri.010G155300 [exp] 139 / 6e-39 AT5G47540 348 / 6e-121 Mo25 family protein (.1) Potri.016G011300 [exp] 87 / 1e-20 AT5G47540 262 / 1e-88 Mo25 family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0020 [flax] [poplar] TPR PF08569 [flax] [poplar] Mo25 Mo25-like
Representative CDS sequence Show only first row Show all	>Lus10034014 pacid=23154841 polypeptide=Lus10034014 locus=Lus10034014.g ID=Lus10034014.BGIv1.0 annot-version=v1.0 ATGTCGTTTTCCTTCTTCAAGCCGTCCCGGCCGAAGACGCCGCAGGAGGTTGTCAGAGCAATCAAGGACAGCCTAACCGCTCTCGATACCAAAACCATCG TCGCTGTTAAAGCCGATGTTAAAGCCCTCGAAAAGGCATCGGAAGAAGTTGAGAAGAACTTCGTGAGTATGAGATATATGCTTTCTGGGGATGGAGAGGT TGAACCGAACATGGAACAAGTTTCACAGTTGGCAACTGAAGTTTGCAACGAGGACGTGCTTACACTTATGGTTCACGAGTTGCTCAATTTAGGATGGGCA GCAAGAAAAGATTTGGTCCACTGCTGGTCAACATTGCTGAAGCATACGGTTGAGTCAACACATTGCTGTGTGGAATATATTGAGAATCATTTGGAATTAC TGGACTTTCTTGTTGTAAGCTACGATAGCAAAGAAATTGCTCAGAATTGTGGAATTATGTTGAGGGAGTGCATCAAATTTCCGTCACTTGCAAAATACAT ATTAGAGTCGGCAAGCTTTGAGCTGTTTTTCAAATTCGTGGAGTTGCCAAACTTTGACGTTGCTTCTGATGCCTTCTCCACGTTCAAGGATTTGCTCAGT AAACATGATACTATAGTTGCAGAGTATCTTACTGTACATTACGATGAGTTCTTTGATCTTTACGAGAAGATTTTGACATCTCCTAATTATGTAACTAGGA GGCAGTCGGTGAAGCTTCTCTCTGAGTTCCTCTTTGAACCTCCGAATTCCAGCATAATGAAGCGCTTTATTCTTGAAGTTCGTTACCTAAAAGTCATGAT GACATTGCTGAGGGACTCTAGTAAAACCATCCAGATTTATGCGTTTCACGTTTTCAAGGTCTTTGTTGCTAATCCTAACAAGCCACAAGAAGTGAAGATG ATACTGGCAAAAAATCACGAAAAACTGGTGGAATTGCTTATAGACCTCTCAGTGGGGAAAGGGTCAGAAGACGAACAGTTTGAAGAGGAAAAGGAAATGA TCATCAAGGAAATATCAAGACTGTCTCGTCTGCCTAATCTTCTCAATGGTTAA
AA sequence Show only first row Show all	>Lus10034014 pacid=23154841 polypeptide=Lus10034014 locus=Lus10034014.g ID=Lus10034014.BGIv1.0 annot-version=v1.0 MSFSFFKPSRPKTPQEVVRAIKDSLTALDTKTIVAVKADVKALEKASEEVEKNFVSMRYMLSGDGEVEPNMEQVSQLATEVCNEDVLTLMVHELLNLGWA ARKDLVHCWSTLLKHTVESTHCCVEYIENHLELLDFLVVSYDSKEIAQNCGIMLRECIKFPSLAKYILESASFELFFKFVELPNFDVASDAFSTFKDLLS KHDTIVAEYLTVHYDEFFDLYEKILTSPNYVTRRQSVKLLSEFLFEPPNSSIMKRFILEVRYLKVMMTLLRDSSKTIQIYAFHVFKVFVANPNKPQEVKM ILAKNHEKLVELLIDLSVGKGSEDEQFEEEKEMIIKEISRLSRLPNLLNG

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G18940			Mo25 family protein (.1.2)		Lus10034014 [exp]	0	1
AT5G53530		VPS26A	vacuolar protein sorting 26A (...		Lus10041291 [exp]	1.4	0.8388
AT2G39630			Nucleotide-diphospho-sugar tra...		Lus10001691 [exp]	13.2	0.8306
AT4G12010			Disease resistance protein (TI...		Lus10008222 [exp]	13.4	0.7885
AT5G47900			Protein of unknown function (D...		Lus10036333 [exp]	14.3	0.8232
AT3G05940			Protein of unknown function (D...		Lus10001426 [exp]	18.7	0.7959
AT2G34930			disease resistance family prot...		Lus10002755 [exp]	18.9	0.8368
AT5G14250		CSN3, FUS11, CO...	FUSCA 11, COP9 SIGNALOSOME SUB...		Lus10032065 [exp]	20.0	0.8278
AT5G04980			DNAse I-like superfamily prote...		Lus10033398 [exp]	24.2	0.7778
AT1G19430			S-adenosyl-L-methionine-depend...		Lus10000716 [exp]	32.2	0.7573
AT5G42770			Maf-like protein (.1.2)		Lus10002531 [exp]	35.4	0.7574

Compare expression of checked genes

Lus10034014 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.