Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G17400 470 / 2e-168 ER-ANT1 endoplasmic reticulum-adenine nucleotide transporter 1 (.1) AT4G28390 367 / 1e-126 ATAAC3, AAC3 ADP/ATP carrier 3 (.1) AT5G13490 358 / 3e-123 AAC2 ADP/ATP carrier 2 (.1.2) AT3G08580 352 / 1e-120 AAC1 ADP/ATP carrier 1 (.1.2) AT5G56450 185 / 3e-56 PM-ANT Mitochondrial substrate carrier family protein (.1) AT4G26180 106 / 3e-26 Mitochondrial substrate carrier family protein (.1) AT3G55640 105 / 6e-26 Mitochondrial substrate carrier family protein (.1) AT2G37890 103 / 2e-25 Mitochondrial substrate carrier family protein (.1) AT1G14560 102 / 6e-25 Mitochondrial substrate carrier family protein (.1) AT3G51870 102 / 2e-24 Mitochondrial substrate carrier family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10017874 [exp] 563 / 0 AT5G17400 473 / 5e-170 endoplasmic reticulum-adenine nucleotide transporter 1 (.1) Lus10039847 [exp] 370 / 6e-128 AT4G28390 545 / 0.0 ADP/ATP carrier 3 (.1) Lus10019702 [exp] 363 / 3e-125 AT5G13490 612 / 0.0 ADP/ATP carrier 2 (.1.2) Lus10016418 [exp] 363 / 3e-125 AT5G13490 612 / 0.0 ADP/ATP carrier 2 (.1.2) Lus10016417 [exp] 363 / 5e-125 AT5G13490 602 / 0.0 ADP/ATP carrier 2 (.1.2) Lus10019701 [exp] 357 / 1e-122 AT5G13490 607 / 0.0 ADP/ATP carrier 2 (.1.2) Lus10031843 [exp] 354 / 1e-121 AT5G13490 580 / 0.0 ADP/ATP carrier 2 (.1.2) Lus10031276 [exp] 353 / 3e-121 AT5G13490 582 / 0.0 ADP/ATP carrier 2 (.1.2) Lus10018612 [exp] 201 / 7e-64 AT5G13490 301 / 1e-102 ADP/ATP carrier 2 (.1.2)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.012G062500 [exp] 469 / 7e-168 AT5G17400 416 / 5e-147 endoplasmic reticulum-adenine nucleotide transporter 1 (.1) Potri.007G139100 [exp] 371 / 2e-128 AT4G28390 572 / 0.0 ADP/ATP carrier 3 (.1) Potri.017G012800 [exp] 366 / 2e-126 AT4G28390 575 / 0.0 ADP/ATP carrier 3 (.1) Potri.001G267800 [exp] 361 / 2e-124 AT3G08580 592 / 0.0 ADP/ATP carrier 1 (.1.2) Potri.009G062200 [exp] 361 / 2e-124 AT5G13490 625 / 0.0 ADP/ATP carrier 2 (.1.2) Potri.001G019400 [exp] 359 / 2e-123 AT5G13490 580 / 0.0 ADP/ATP carrier 2 (.1.2) Potri.003G204600 [exp] 358 / 5e-123 AT5G13490 582 / 0.0 ADP/ATP carrier 2 (.1.2) Potri.006G227100 [exp] 188 / 2e-57 AT5G56450 462 / 4e-165 Mitochondrial substrate carrier family protein (.1) Potri.006G226300 [exp] 119 / 6e-31 AT1G14560 476 / 7e-170 Mitochondrial substrate carrier family protein (.1) Potri.002G168100 [exp] 105 / 6e-26 AT4G01100 565 / 0.0 adenine nucleotide transporter 1 (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF00153 [flax] [poplar] Mito_carr Mitochondrial carrier protein
Representative CDS sequence Show only first row Show all	>Lus10034658 pacid=23162706 polypeptide=Lus10034658 locus=Lus10034658.g ID=Lus10034658.BGIv1.0 annot-version=v1.0 ATGGAAATGAATAAGAAATCTGAGAGATTCTATGCTGATTTTGTAATGGGAGGAACAGCAGCGGTGGTTTCGAAGTCGGCGGCGGCACCGATTGAGCGGG TGAAGCTATTGTTACAGAATCAAGGTGAAATGATGAAGAGAGGGCAGTTGAGAAGACCCTATGTGGGGATTGGGGATTGCTTTAGGCGGGTGTTTAGAGA AGAAGGAATATTGTCTTTTTGGAGAGGTAACCAGGCCAATGTCATTCGATATTTCCCAACTCAGGCTTTCAACTTTGCATTCAAAGGTTACTTCAAAAGC ATATTCGGGCGTTCGAAAGAGAAAGATGGCTACGCAAAGTGGTTCATTGGGAATGTGGCTTCAGGTAGTGCTGCTGGTGCCACCACATCATTGTTCCTCT ACCATTTGGATTATGCACGTACCCGTCTGGGAACTGATTCAAGAGAATGCCGGATCAACGATCGGCGCCAATTTAAAGGATTACTTGACGTGTACAGAAA AACTTGGTCAAGTGATGGCATTGTAGGTTTGTATAGAGGATTTGGGGTTTCAATCATCGGAATTACTCTTTATCGTGGCATGTACTTTGGGATCTATGAT ACTGTGAAGCCTATTCTGTTGGTGGGATCTCTAGAGGGGAATTTCTTAGCGAGTTTCTTTTTAGGTTGGAGCATCACTACAGTCTCTGGGGTTTGCGCGT ACCCTTTCGACACAGTTAGGCGAAGAATGATGCTAACTTCTGGACAGCCTAATAAATACCGAAATGCTGTACATGCACTGCGGGAGATTGTTCGTGTCGA AGGGTTGGCTGCTCTTTTTCGCGGAGTAACTGCAAATATGCTTCTTGGAGTTGCTGGGGCAGGAGTTCTAGCAAGTTATGATCAGCTGCAGAGATTTGCT AATAGAAGTGGTTATGTGTTGGAGCACCCAAGCCAAAAATCCTACTGA
AA sequence Show only first row Show all	>Lus10034658 pacid=23162706 polypeptide=Lus10034658 locus=Lus10034658.g ID=Lus10034658.BGIv1.0 annot-version=v1.0 MEMNKKSERFYADFVMGGTAAVVSKSAAAPIERVKLLLQNQGEMMKRGQLRRPYVGIGDCFRRVFREEGILSFWRGNQANVIRYFPTQAFNFAFKGYFKS IFGRSKEKDGYAKWFIGNVASGSAAGATTSLFLYHLDYARTRLGTDSRECRINDRRQFKGLLDVYRKTWSSDGIVGLYRGFGVSIIGITLYRGMYFGIYD TVKPILLVGSLEGNFLASFFLGWSITTVSGVCAYPFDTVRRRMMLTSGQPNKYRNAVHALREIVRVEGLAALFRGVTANMLLGVAGAGVLASYDQLQRFA NRSGYVLEHPSQKSY

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G17400		ER-ANT1	endoplasmic reticulum-adenine ...		Lus10034658 [exp]	0	1
AT3G02300			Regulator of chromosome conden...		Lus10030712 [exp]	6.2	0.8276
AT5G04440			Protein of unknown function (D...		Lus10037929 [exp]	6.6	0.8533
AT1G71480			Nuclear transport factor 2 (NT...		Lus10041048 [exp]	7.3	0.8725
AT4G33470		HDA14, ATHDA14	histone deacetylase 14 (.1)		Lus10010889 [exp]	7.5	0.8483
AT4G08170			Inositol 1,3,4-trisphosphate 5...		Lus10020513 [exp]	7.9	0.8112
AT3G23400		FIB4	fibrillin 4, Plastid-lipid ass...		Lus10021209 [exp]	8.5	0.8280
AT3G14630		CYP72A9	"cytochrome P450, family 72, s...		Lus10002311 [exp]	9.2	0.8511
AT1G07540	MYB	TRFL2	TRF-like 2 (.1)		Lus10010844 [exp]	9.8	0.8552
AT3G09050			unknown protein		Lus10035515 [exp]	9.9	0.8800
AT1G64850			Calcium-binding EF hand family...		Lus10010653 [exp]	13.7	0.8186

Compare expression of checked genes

Lus10034658 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.