Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G07920 389 / 3e-132 ATDGK1, DGK1 DIACYLGLYCEROL KINASE 1, diacylglycerol kinase1 (.1) AT5G63770 289 / 3e-95 ATDGK2 diacylglycerol kinase 2 (.1.2) AT2G20900 68 / 5e-13 DGK5, ATDGK5 diacylglycerol kinase 5 (.1.2.3.4) AT4G28130 67 / 5e-13 DGK6, ATDGK6 diacylglycerol kinase 6 (.1) AT5G57690 66 / 2e-12 ATDGK4 diacylglycerol kinase 4 (.1) AT2G18730 61 / 8e-11 ATDGK3 diacylglycerol kinase 3 (.1) AT4G30340 59 / 4e-10 ATDGK7 diacylglycerol kinase 7 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10021625 [exp] 432 / 3e-149 AT5G07920 1101 / 0.0 DIACYLGLYCEROL KINASE 1, diacylglycerol kinase1 (.1) Lus10015742 [exp] 385 / 4e-131 AT5G07920 1053 / 0.0 DIACYLGLYCEROL KINASE 1, diacylglycerol kinase1 (.1) Lus10003460 [exp] 377 / 3e-128 AT5G07920 1050 / 0.0 DIACYLGLYCEROL KINASE 1, diacylglycerol kinase1 (.1) Lus10012719 [exp] 262 / 2e-83 AT5G63770 957 / 0.0 diacylglycerol kinase 2 (.1.2) Lus10010896 [exp] 262 / 2e-83 AT5G63770 955 / 0.0 diacylglycerol kinase 2 (.1.2) Lus10019987 [exp] 65 / 4e-12 AT4G30340 713 / 0.0 diacylglycerol kinase 7 (.1) Lus10015514 [exp] 65 / 5e-12 AT4G30340 707 / 0.0 diacylglycerol kinase 7 (.1) Lus10033732 [exp] 62 / 4e-11 AT2G20900 730 / 0.0 diacylglycerol kinase 5 (.1.2.3.4) Lus10006991 [exp] 62 / 5e-11 AT2G18730 677 / 0.0 diacylglycerol kinase 3 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.012G066300 [exp] 396 / 4e-135 AT5G07920 1154 / 0.0 DIACYLGLYCEROL KINASE 1, diacylglycerol kinase1 (.1) Potri.007G097900 [exp] 264 / 4e-84 AT5G63770 933 / 0.0 diacylglycerol kinase 2 (.1.2) Potri.005G070900 [exp] 263 / 5e-84 AT5G63770 897 / 0.0 diacylglycerol kinase 2 (.1.2) Potri.001G408500 [exp] 71 / 5e-14 AT2G20900 695 / 0.0 diacylglycerol kinase 5 (.1.2.3.4) Potri.013G148500 [exp] 71 / 6e-14 AT2G20900 765 / 0.0 diacylglycerol kinase 5 (.1.2.3.4) Potri.018G096700 [exp] 68 / 5e-13 AT2G18730 702 / 0.0 diacylglycerol kinase 3 (.1) Potri.006G174700 [exp] 65 / 4e-12 AT4G30340 670 / 0.0 diacylglycerol kinase 7 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF00609 [flax] [poplar] DAGK_acc Diacylglycerol kinase accessory domain
Representative CDS sequence Show only first row Show all	>Lus10034702 pacid=23162828 polypeptide=Lus10034702 locus=Lus10034702.g ID=Lus10034702.BGIv1.0 annot-version=v1.0 ATGGTAGGAGTATTTTGCTTCTACGGTGTTGGTTGCGATGCCAAGGTTGCTCTTGAAATTCATAATTTAAGAGGAGAAAATCCTGAGAAGTTTTATAACC AGTTTATGAACAAAGTTCTTTATGCAAGAGAAGGAGCAAAGACTATAATGGACCGCACATTTGCTGATTTTCCATGGCAAGTCAGACTGGAAGTGGATGG TGTGGAAATAGAGGTCCCAGAGGACGCTGAAGGAGTACTTGTTGCTAACATTGGAAGCTACATGGGTGGTGTGGACTTATGGCAAAATGAGGATGAATCG TATGACAGTTTTGATCCGCAATCAATGCATGATAAGTTACTTGAAGTTGTGAGCATATCTGGAACGTGGCACTTGGGAAAGCTTCAGGTGGGACTCTCAC GCGCTCGTAGGCTTGCACAAGGGGAGTTGATTAAGATACAGCTGTTTGCTCCTTTGCCTGTCCAAATTGATGGGGAGCCTTGGCTTCAGCAATCATGTAC CTTAATTGTAACTCATCACGGCCAGGCCTTTATGTTGAAAAGAGCAGCAGAAGAACCTCTAGGACATGCAGCTGCAATAATAGCCGATGTGCTTGCAAAT GCCGAAACTAACCATGTTATCAATGCCTCTCAAAAGCGAGATCTTCTCCATGAAATGGCTCTCAGGCTATGTTGA
AA sequence Show only first row Show all	>Lus10034702 pacid=23162828 polypeptide=Lus10034702 locus=Lus10034702.g ID=Lus10034702.BGIv1.0 annot-version=v1.0 MVGVFCFYGVGCDAKVALEIHNLRGENPEKFYNQFMNKVLYAREGAKTIMDRTFADFPWQVRLEVDGVEIEVPEDAEGVLVANIGSYMGGVDLWQNEDES YDSFDPQSMHDKLLEVVSISGTWHLGKLQVGLSRARRLAQGELIKIQLFAPLPVQIDGEPWLQQSCTLIVTHHGQAFMLKRAAEEPLGHAAAIIADVLAN AETNHVINASQKRDLLHEMALRLC

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G07920		ATDGK1, DGK1	DIACYLGLYCEROL KINASE 1, diacy...		Lus10034702 [exp]	0	1
AT2G37570		SLT1	sodium- and lithium-tolerant 1...		Lus10024406 [exp]	1.4	0.8628
AT1G69510			cAMP-regulated phosphoprotein ...		Lus10030448 [exp]	2.2	0.8544
AT1G68090		ANN5, ANNAT5	ANNEXIN ARABIDOPSIS THALIANA 5...		Lus10009225 [exp]	3.3	0.8695
AT4G31130			Protein of unknown function (D...		Lus10030037 [exp]	4.5	0.8452
AT5G02790		GSTL3	Glutathione transferase L3, Gl...		Lus10003994 [exp]	4.9	0.8599
AT1G67570			Protein of unknown function (D...		Lus10006430 [exp]	5.3	0.8340
AT1G64230		UBC28	ubiquitin-conjugating enzyme 2...		Lus10021385 [exp]	6.0	0.8621
AT1G61670			Lung seven transmembrane recep...		Lus10025219 [exp]	9.8	0.8445
AT4G32920			glycine-rich protein (.1.2.3)		Lus10000229 [exp]	10.5	0.7703
					Lus10022348 [exp]	13.6	0.8091

Compare expression of checked genes

Lus10034702 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.