Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	No hit found
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description
Poplar homologues Show only best Show top 10	No hit found
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10034710 pacid=23162844 polypeptide=Lus10034710 locus=Lus10034710.g ID=Lus10034710.BGIv1.0 annot-version=v1.0 ATGGCTTCAACAGCAGGCTCGGACCGTTGTTCTTCGTTGTTTGATCTGGTAAAGAATGATATTTCTGCTTCGAAGAAGGAAGGAATAGCGAGGCACTTGA AGTTGCTCGAGGATCGTGAAGCTTCTGAAGGAAACGTTTCGGTGAAATCATCGAGTGATTTGAATGTCAGGAAACCGTTGAGTGATGTGAATGATCATTT AAATGAGGAGCAGGCACGTATATTTGCTAAGCTCGGTGTACCTATTGGAGGAAAGGTGGAGGGAGAAGGTTCACGTGCTGAAAAGTTACGTAGGCTCGAG TATCTCAAGGATCCTGAGCGGGCTAAAATTAGATCAGCGAAGCACAGGAAGGCGCTGGAGGACTTGATTGCTTCTCAAGGAAAAAACTTTTGGGTGAAAA GAGGGTTAGAAGAACCTGAGAAGATATCGGTGGATGATTTGATAGAAAAGGAGCTTCCTTTTGTGAGGGAGAAGCATCGTAAAATGAAAGAACAAATGGA GTTGTTTCCTTTTGACGAGCGCTGCACATTAAAGGGCGATGCGTACGTCCTGGTGTGTCCTTCTGAGGAGGATATGGCAATTGCAAGGATACTCATGAAG CGCCCTGTTTGA
AA sequence Show only first row Show all	>Lus10034710 pacid=23162844 polypeptide=Lus10034710 locus=Lus10034710.g ID=Lus10034710.BGIv1.0 annot-version=v1.0 MASTAGSDRCSSLFDLVKNDISASKKEGIARHLKLLEDREASEGNVSVKSSSDLNVRKPLSDVNDHLNEEQARIFAKLGVPIGGKVEGEGSRAEKLRRLE YLKDPERAKIRSAKHRKALEDLIASQGKNFWVKRGLEEPEKISVDDLIEKELPFVREKHRKMKEQMELFPFDERCTLKGDAYVLVCPSEEDMAIARILMK RPV

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
					Lus10034710 [exp]	0	1
AT1G67710	GARP	ARR11	response regulator 11 (.1)		Lus10006446 [exp]	2.4	0.9243
AT5G63030		GRXC1	glutaredoxin C1, Thioredoxin s...		Lus10042104 [exp]	6.0	0.8967
AT2G16385			unknown protein		Lus10017979 [exp]	6.3	0.9225
AT5G42510			Disease resistance-responsive ...		Lus10038298 [exp]	12.9	0.8426
AT2G06530		VPS2.1	SNF7 family protein (.1)		Lus10037660 [exp]	15.5	0.8767
AT4G24040		TREHALASE1, ATT...	trehalase 1 (.1)		Lus10023035 [exp]	16.0	0.9052
AT5G01520		AtAIRP2, AIRP2	ABA Insensitive RING Protein 2...		Lus10002491 [exp]	18.7	0.8847
AT1G17455		ELF4-L4	ELF4-like 4 (.1.2)		Lus10000408 [exp]	20.6	0.8851
AT5G02790		GSTL3	Glutathione transferase L3, Gl...		Lus10003994 [exp]	21.0	0.8532
AT5G43280		ATDCI1	"delta\(3,5\),delta\(2,4\)-die...		Lus10011336 [exp]	21.4	0.8837

Compare expression of checked genes

Lus10034710 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.