Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G46720 145 / 2e-44 AIG2-like (avirulence induced gene) family protein (.1) AT3G02910 130 / 1e-38 AIG2-like (avirulence induced gene) family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10040635 [exp] 125 / 4e-37 AT3G02910 135 / 4e-41 AIG2-like (avirulence induced gene) family protein (.1) Lus10018276 [exp] 130 / 5e-37 AT3G02910 142 / 4e-41 AIG2-like (avirulence induced gene) family protein (.1) Lus10040471 [exp] 0 / 1 ND 52 / 1e-26
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.003G092600 [exp] 153 / 2e-47 AT5G46720 144 / 8e-44 AIG2-like (avirulence induced gene) family protein (.1) Potri.019G041100 [exp] 143 / 1e-43 AT3G02910 220 / 7e-74 AIG2-like (avirulence induced gene) family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0278 [flax] [poplar] AIG2 PF06094 [flax] [poplar] GGACT Gamma-glutamyl cyclotransferase, AIG2-like
Representative CDS sequence Show only first row Show all	>Lus10034712 pacid=23162765 polypeptide=Lus10034712 locus=Lus10034712.g ID=Lus10034712.BGIv1.0 annot-version=v1.0 ATGGCGGAAGAACCCACCTCCACCACCAGATCCACAACCCAAAAGGACAAAAACGACACCGTAATATTCACCTACGGCACCCTGAAGCGGCGCTTCCCGA ATCATCACCTCTTGCAAGATCTGATGGCCACCAACGACGCTACTTTCATCTCCTCGTGCGTCACCGTCCATCCGCATCCGCTTGTGATTGGACCCAACGG AATCCCTTTCCTCATCAACATCCCCGGAGAAGGCCAGAGGGTCAAGGGAGAACTCTACCGCGTGTCGGCGCGTGGAATGGTGCGTGTGGATGAGCTGGAA GGGACGGAGACGGGGCACTACGAGCGGCTCCCGATCCGCGTGGAGATGGGCGGCGGCGAATCGGAGGAGGCGGAGGCGTATTTTGCGGACAGGGGGTTCG GGGAGAGGATGTGGAGGAAAGTTGGGGAAGGGCTGAGCGAGTACGGCGAGAAATACGCAGTGGGATACGTTCGGAAAGAGGATCGGCCGGCGGGGACTAA CTTTCTTCGTGAAATCCAAGTATTCCTGCTCTGA
AA sequence Show only first row Show all	>Lus10034712 pacid=23162765 polypeptide=Lus10034712 locus=Lus10034712.g ID=Lus10034712.BGIv1.0 annot-version=v1.0 MAEEPTSTTRSTTQKDKNDTVIFTYGTLKRRFPNHHLLQDLMATNDATFISSCVTVHPHPLVIGPNGIPFLINIPGEGQRVKGELYRVSARGMVRVDELE GTETGHYERLPIRVEMGGGESEEAEAYFADRGFGERMWRKVGEGLSEYGEKYAVGYVRKEDRPAGTNFLREIQVFLL

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G46720			AIG2-like (avirulence induced ...		Lus10034712 [exp]	0	1
AT3G17020			Adenine nucleotide alpha hydro...		Lus10016900 [exp]	3.9	0.8540
AT2G47400		CP12-1	CP12 domain-containing protein...		Lus10025025 [exp]	6.6	0.8884
AT1G60870		MEE9	maternal effect embryo arrest ...		Lus10022977 [exp]	6.8	0.8062
AT4G03600			unknown protein		Lus10018599 [exp]	9.5	0.8420
AT1G74070			Cyclophilin-like peptidyl-prol...		Lus10008990 [exp]	16.3	0.8618
AT4G03600			unknown protein		Lus10039834 [exp]	16.9	0.8416
AT1G76080		ATCDSP32, CDSP3...	ARABIDOPSIS THALIANA CHLOROPLA...		Lus10005624 [exp]	19.4	0.8294
AT4G30825			Tetratricopeptide repeat (TPR)...		Lus10036600 [exp]	19.4	0.8562
					Lus10018772 [exp]	19.7	0.8566
AT2G37920		EMB1513	embryo defective 1513, copper ...		Lus10024339 [exp]	24.8	0.8439

Compare expression of checked genes

Lus10034712 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.