Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G45410 296 / 3e-99 unknown protein AT4G25030 280 / 1e-92 unknown protein
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10033276 [exp] 520 / 0 AT4G25030 348 / 4e-119 unknown protein Lus10036513 [exp] 303 / 1e-101 AT4G25030 413 / 8e-145 unknown protein Lus10036514 [exp] 296 / 5e-99 AT4G25030 420 / 1e-147 unknown protein Lus10041414 [exp] 294 / 2e-98 AT4G25030 424 / 4e-149 unknown protein Lus10041415 [exp] 294 / 3e-98 AT4G25030 408 / 5e-143 unknown protein
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.001G131300 [exp] 383 / 3e-133 AT5G45410 337 / 9e-115 unknown protein Potri.008G042100 [exp] 317 / 5e-107 AT4G25030 355 / 1e-121 unknown protein Potri.010G219900 [exp] 312 / 2e-105 AT4G25030 355 / 5e-122 unknown protein
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10034730 pacid=23142291 polypeptide=Lus10034730 locus=Lus10034730.g ID=Lus10034730.BGIv1.0 annot-version=v1.0 ATGGACTCGCTGTTTAAAGGAATCGATGGCAGTGCATCTGAATGCCACTTTGACGACAAGGCTATACAGAGATGCCCATTTTTGAGGAACATCAACAAGC CAACAAGCTTCTCTTTCTCAGCTGTGAATTTCCCTGGTCTTGGAACCAAGGGACCAATATTTGAAGATGCTCCTAATTTTGACATGGCATTCAAGCTCTT TCATGGCAAATATGGGGTTGTTCCACTCGCAAGCAACTCTAATTATCATGATGATTTCCAGCATACTGAGCCAACTCCTCCCCAGTTCATCCCCTTAGCT GCGAAAGCGGCCACCATAAGCCTCTCTTCTTTTGGTCTAGGGGGACCTTTTGGCTTTGAAGGCAATGTGCCAAAGCATGAAGCAAATCGGAACGCATGGT TACAATCAGGAAACTGCCCGATTGCCAAATCATACAGAGTGGTAAGTCGTGTGCTCCCACTTGTGGCATCAACCCTCCGGCCACCACCCGGGATGAAGCT CAGATGTCCACCAGCTGTAGTTGCTGCAAGGGCAGCGCTAGCCCGTACCGCCTTTGTGAAGACCATAAGACCTCAGCCATTACCAGCGAAAATGCTGGTG ATTGCGATGCTAGGAATGGCAGCAAACATTCCCCTGGGGATGTGGAAGGAACACACGAAGAAGTTCTCGATGTCATGGTTTGCCGCAGTTCATGCAGCAG TGCCTTTCATTGCCATGCTGAGGAAATCGGTACTGATGCCTAAATCTGCCATGGCGCTGACCATCGGGGCTTCAATAATGGGCCAGGTGATCGGGTCGAG AGCCGAGAGACAGCGGCTGAAACTGAAGGCAACTTCTTCATCTCAGGTCGCAATGAGATCAGAGATGGCGGCGGATGATGGCGTTGGAGGGTATGATATT GGCATTGGCGGTTGTGGAAAAGAAGGAATAATATGGGATCCGATGTTGAGTACGAATGGTGGTAGAACAACTTCATCGTCAGCCAGCGCTTGCTGCTAA
AA sequence Show only first row Show all	>Lus10034730 pacid=23142291 polypeptide=Lus10034730 locus=Lus10034730.g ID=Lus10034730.BGIv1.0 annot-version=v1.0 MDSLFKGIDGSASECHFDDKAIQRCPFLRNINKPTSFSFSAVNFPGLGTKGPIFEDAPNFDMAFKLFHGKYGVVPLASNSNYHDDFQHTEPTPPQFIPLA AKAATISLSSFGLGGPFGFEGNVPKHEANRNAWLQSGNCPIAKSYRVVSRVLPLVASTLRPPPGMKLRCPPAVVAARAALARTAFVKTIRPQPLPAKMLV IAMLGMAANIPLGMWKEHTKKFSMSWFAAVHAAVPFIAMLRKSVLMPKSAMALTIGASIMGQVIGSRAERQRLKLKATSSSQVAMRSEMAADDGVGGYDI GIGGCGKEGIIWDPMLSTNGGRTTSSSASACC

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT4G25030			unknown protein		Lus10034730 [exp]	0	1
AT5G15070			Phosphoglycerate mutase-like f...		Lus10005263 [exp]	2.8	0.8516
AT5G60920		COB	COBRA-like extracellular glyco...		Lus10017861 [exp]	3.9	0.8752
AT1G60030		ATNAT7	ARABIDOPSIS NUCLEOBASE-ASCORBA...		Lus10005717 [exp]	4.9	0.8510
AT5G17680			disease resistance protein (TI...		Lus10043227 [exp]	8.8	0.8387
AT1G05160		ATKAO1, CYP88A3	ENT-KAURENOIC ACID OXYDASE 1, ...		Lus10036671 [exp]	9.9	0.8376
AT2G22590			UDP-Glycosyltransferase superf...		Lus10043446 [exp]	11.5	0.8228
AT2G19130			S-locus lectin protein kinase ...		Lus10012955 [exp]	14.4	0.8299
AT4G25440	C3HZnF	ZFWD1	zinc finger WD40 repeat protei...		Lus10000559 [exp]	16.1	0.8402
AT1G65390		ATPP2-A5	phloem protein 2 A5 (.1.2)		Lus10040606 [exp]	17.5	0.7749
AT5G65550			UDP-Glycosyltransferase superf...		Lus10028863 [exp]	18.7	0.8388

Compare expression of checked genes

Lus10034730 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.