Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G14850 588 / 0 Alg9-like mannosyltransferase family (.1.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10033296 [exp] 917 / 0 AT5G14850 697 / 0.0 Alg9-like mannosyltransferase family (.1.2) Lus10033341 [exp] 833 / 0 AT5G14850 701 / 0.0 Alg9-like mannosyltransferase family (.1.2)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.018G098700 [exp] 645 / 0 AT5G14850 720 / 0.0 Alg9-like mannosyltransferase family (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0111 [flax] [poplar] GT-C PF03901 [flax] [poplar] Glyco_transf_22 Alg9-like mannosyltransferase family
Representative CDS sequence Show only first row Show all	>Lus10034759 pacid=23142147 polypeptide=Lus10034759 locus=Lus10034759.g ID=Lus10034759.BGIv1.0 annot-version=v1.0 ATGAGGCAGAGACCCGTTGAAGCAAAAGCCTCAGTCGTTGAAACCAATGATCAGCAGTATGAAGACAAGAGATCCATCAAATCCACTTCACTTTCTGATA CTAGAATCTTCGCCTTCTGTTTCACTTTACGGATAGTTAACTCTCTCCTAATACAGACCTACTTCAACCCGGATGAGTACTGGCAATCTCTGGAAGTTGC ACACCGTCTTGTTTTTGGGGATGGTCATTTGACGTGGGAATGGAAGAAGGGAATTCGTAGTTATTTGCACCCTTTGGTCTTTGCGGCCTTTTATAAAGTC CTAGCAGTTTTGGGTCTTGATACTCCCTGGTTAATGGTAAAGTCTCCAAGGTTGTTGCAAGCCCTGTTTTCAGCATTTGGTGATTTGTACTGCTATAAAC TTTCTTTGGTGATCTTTGGTTCTTCTACCGCACGATGGGCTTTTTTCTCTCAGTTGACCAATTGGTTTATGTTCTTTTGCTTCAACCGCACATTATCAAA TAGCCTGGAAACAGTTCTTACATTGGTGGGTTTGTATCACTGGCCTTGTATGCGAACCTCTCCTGGTGATGCTTTGGTAGGTTCAAGGAAGGTGGGGTTG CTGATAGCAGGATTAGCATGTGCAATCCGGCCGACATGTGCTGTTATATGGGTTTATGTTGGCTTACTTGAGCTGTTTCTTACTCGTGACCGAATAAGAT TTTTCGCTCTTGAGGTGGTCCCTATAGGGGCACTCATACTTGGACTTTCAAGCTTAGTTGATCGAGTTATGTATAGCTACTGGGTATTTGTACCTTGGAG TTTTCTCAAGTTCAATTTTCTTTCCTCTGGTGGAGATTATTATGGAACTCACCCTAGGCACTGGTTTGTTATACCTGTGCTTCCAATAGCTTTAATGTTT TCTGGATATTCGTTGGCCGTAATGGTAAACCCTGCTCCCTCAAATGGCAAAAGGAAAGGTTCTTCGAACAACAAATCTCTTAAGAAAATTGTATTTCCGG TCTTCTTTTTGCTTGCCACGAATATTCCAATGGCCTTGTACATGAGTTTGGTCCATCAGAGAGGAACTGAAGATGTGATGATCTATCTATCCAAAGAAGC TCGTGGAGATAAAGTTAGTAGCATTCTCTTCTTAATGCCTTGCCATGCCTCACCTTACTACTCTAGTCTGCATTACAATGTGCCAATGCGTTTCCTGGAC TGCACACCAAGCGAAGAGAGAGGAATCCCAGATGAGTCGGACAGATTCATGATGGATCCTGTTGGTTTTATGGAAGAATTCTCAAAGGAGTGGTCTCTAC CGAGTCATATTGTGTTATTTGAGTCAGAGGAAAGATTATTGAAGGAATTTTTGTTGTCGTGTTCCTTTAAAGAGTCGCAGAGGTTTTTCCATGCCCACTT CAAAGTTGATCGTGATCTCCAAGCTTCAGTTGTAGTTTATGCTTTGGAGTTTGAACACATTGACAAGGTCCATCCTTTATCTCTCTGCCTGTTCCATGTT AGTCATAAGGGTTCAACATGCCTGAGAAGTTGA
AA sequence Show only first row Show all	>Lus10034759 pacid=23142147 polypeptide=Lus10034759 locus=Lus10034759.g ID=Lus10034759.BGIv1.0 annot-version=v1.0 MRQRPVEAKASVVETNDQQYEDKRSIKSTSLSDTRIFAFCFTLRIVNSLLIQTYFNPDEYWQSLEVAHRLVFGDGHLTWEWKKGIRSYLHPLVFAAFYKV LAVLGLDTPWLMVKSPRLLQALFSAFGDLYCYKLSLVIFGSSTARWAFFSQLTNWFMFFCFNRTLSNSLETVLTLVGLYHWPCMRTSPGDALVGSRKVGL LIAGLACAIRPTCAVIWVYVGLLELFLTRDRIRFFALEVVPIGALILGLSSLVDRVMYSYWVFVPWSFLKFNFLSSGGDYYGTHPRHWFVIPVLPIALMF SGYSLAVMVNPAPSNGKRKGSSNNKSLKKIVFPVFFLLATNIPMALYMSLVHQRGTEDVMIYLSKEARGDKVSSILFLMPCHASPYYSSLHYNVPMRFLD CTPSEERGIPDESDRFMMDPVGFMEEFSKEWSLPSHIVLFESEERLLKEFLLSCSFKESQRFFHAHFKVDRDLQASVVVYALEFEHIDKVHPLSLCLFHV SHKGSTCLRS

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G14850			Alg9-like mannosyltransferase ...		Lus10034759 [exp]	0	1
AT2G24960			unknown protein		Lus10026250 [exp]	3.5	0.8520
					Lus10033536 [exp]	3.9	0.8020
AT1G78760			F-box/RNI-like superfamily pro...		Lus10024701 [exp]	6.9	0.8077
					Lus10026307 [exp]	10.7	0.7297
AT4G14180		ATPRD1	putative recombination initiat...		Lus10003912 [exp]	15.5	0.7857
					Lus10041093 [exp]	17.7	0.8056
AT3G04160			unknown protein		Lus10042519 [exp]	20.8	0.7432
AT5G55100			SWAP (Suppressor-of-White-APri...		Lus10043105 [exp]	21.1	0.7996
AT2G17020			F-box/RNI-like superfamily pro...		Lus10022651 [exp]	24.5	0.7463
AT5G52110		CCB2, HCF208	HIGH CHLOROPHYLL FLUORESCENCE ...		Lus10005770 [exp]	29.0	0.7405

Compare expression of checked genes

Lus10034759 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.