Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G79020 513 / 0 Enhancer of polycomb-like transcription factor protein (.1) AT1G16690 473 / 3e-165 Enhancer of polycomb-like transcription factor protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10033318 [exp] 793 / 0 AT1G79020 586 / 0.0 Enhancer of polycomb-like transcription factor protein (.1) Lus10008985 [exp] 49 / 1e-05 AT5G04670 325 / 2e-99 Enhancer of polycomb-like transcription factor protein (.1) Lus10028841 [exp] 45 / 0.0001 AT1G66950 1374 / 0.0 ATP-binding cassette G39, pleiotropic drug resistance 11 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.014G000600 [exp] 585 / 0 AT1G79020 561 / 0.0 Enhancer of polycomb-like transcription factor protein (.1) Potri.010G235900 [exp] 53 / 4e-07 AT5G04670 518 / 2e-173 Enhancer of polycomb-like transcription factor protein (.1) Potri.008G024300 [exp] 43 / 0.0005 AT5G04670 488 / 3e-162 Enhancer of polycomb-like transcription factor protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF10513 [flax] [poplar] EPL1 Enhancer of polycomb-like
Representative CDS sequence Show only first row Show all	>Lus10034778 pacid=23142167 polypeptide=Lus10034778 locus=Lus10034778.g ID=Lus10034778.BGIv1.0 annot-version=v1.0 ATGAGTAGGCTGTCATTTAGGCCGCGACCGCTCGACATAACCAAGAAGCTCCCTATTTTGAAGTCGGTTAAGGAGTTTGAAGACGATGATTCGACTCCCA CTGCTACTCGCAACTCTCAGCTGCTCCGCATTTCTGCTGCTGACTTCGAGAGTGAGGCGCATCATCCTCACGTTCCTACCAAGAAATTAGCTTCTGAAAT TCCCACGCCGCAATTTGACGATGTTGATACTTACGAGAGAGATTATGGCCGCACGTTCTTTCAGCCCAATTCTTATATTCGAGCAAGGGGAGCTCGAGCT GAGATTGGAGAATTTGTTGAATATGATCTTGACAATGAAGATGAGGACTGGCTTCAAGACTTCAATAGAGACAAGGATAACCTTCCTCCTGAAAAGTTTG AAGTTCTTCTATTTAAGTTGGAGGCATTAGATCATAAGGCCCGAGAAAGAGCTGGGGTTATAACACCAACTCTTGGTTCTCCAATCCCTGTTCTTCTACA AATTGATGCTGCTATCGAGGCGCTGCAAGCTCATGCTCAAACTCAGTCAATTACATATGGGCTTCTCCGGTCTGTTTATAATTATTGGAAAGAGAAGCGT GAAAGATGGCAGAAGCCTGTTTTACGCCGTCTTCAGCCTCCTCCCCCAGTTAATGATACAAACCCATACAATGTCTTCAGGCCACGGGAAAGAGCACACA GGCTACTTACGAGAAAGAGGAGGGAAAATAATGTACAATCATTTGAGAAGTTGCGCCAGGTCCGGCGCAATCTTGAGCAGGCCAAGACCATACTTGAGGC TCTGATTAAGAGAGAAGAGAAGAAAAGAGAAGTGACGGAGACTGAAGTAAGTCTGCAGAGGATCCAAATCAAGTACAAGCACGAAACTGAGCTCCTCGAG GACAGCTTAGCTTTTCCCGGGTTTCAACCCATCTCTTCCAAGTTTGCATCAAGTGAAGATGAAATTTTGGATTCAGATGACTTTGGCAACAGCCGTCCAA GAACATGGCCTCCTCTTCCGACTCACAATCCACCTTCGACAGATTCCAGCATTCTCAACTTCCCTGCTGCAACCATGAAGCAAGAGCTACGAAGGAGGCA TGGACCTGACGGCTGGCTCAACAAAATGGATCCAAATGAACCAGTTTTATTGTTCACAAAGCCATTGGTACTGGAGAAGCTGGCATCTGCGGGCATTCAA CAACCAGTGGATCCATCACCGAGTAGGGATGGTAGCGGATCAGCAGTGGGCTATAGATTCCGAGGTAGGATGGGTCGCGGTGGGCGAATCGTATTTGATA GATGGAACCCACTTTCCCAATCTCCAATTGATTTAGGCAATACTCTATACATGGCCCCGAGACCCCGACCCTCAACCTTTTACAATTAA
AA sequence Show only first row Show all	>Lus10034778 pacid=23142167 polypeptide=Lus10034778 locus=Lus10034778.g ID=Lus10034778.BGIv1.0 annot-version=v1.0 MSRLSFRPRPLDITKKLPILKSVKEFEDDDSTPTATRNSQLLRISAADFESEAHHPHVPTKKLASEIPTPQFDDVDTYERDYGRTFFQPNSYIRARGARA EIGEFVEYDLDNEDEDWLQDFNRDKDNLPPEKFEVLLFKLEALDHKARERAGVITPTLGSPIPVLLQIDAAIEALQAHAQTQSITYGLLRSVYNYWKEKR ERWQKPVLRRLQPPPPVNDTNPYNVFRPRERAHRLLTRKRRENNVQSFEKLRQVRRNLEQAKTILEALIKREEKKREVTETEVSLQRIQIKYKHETELLE DSLAFPGFQPISSKFASSEDEILDSDDFGNSRPRTWPPLPTHNPPSTDSSILNFPAATMKQELRRRHGPDGWLNKMDPNEPVLLFTKPLVLEKLASAGIQ QPVDPSPSRDGSGSAVGYRFRGRMGRGGRIVFDRWNPLSQSPIDLGNTLYMAPRPRPSTFYN

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G79020			Enhancer of polycomb-like tran...		Lus10034778 [exp]	0	1
AT3G27260		GTE8	global transcription factor gr...		Lus10014609 [exp]	1.4	0.8888
AT5G12410			THUMP domain-containing protei...		Lus10005018 [exp]	2.8	0.8761
AT2G16676			unknown protein		Lus10035139 [exp]	3.7	0.8610
AT4G02570		AXR6, ATCUL1	AUXIN RESISTANT 6, cullin 1 (....		Lus10024562 [exp]	4.2	0.8872
AT1G32810			RING/FYVE/PHD zinc finger supe...		Lus10001662 [exp]	6.5	0.8713
AT5G06160		ATO	ATROPOS, splicing factor-relat...		Lus10000360 [exp]	8.5	0.8804
AT5G44090			Calcium-binding EF-hand family...		Lus10022907 [exp]	8.7	0.8565
AT5G09860		AtTHO1, AtHPR1	nuclear matrix protein-related...		Lus10024130 [exp]	9.0	0.8667
AT1G23890			NHL domain-containing protein ...		Lus10030639 [exp]	9.2	0.8749
AT3G49000			RNA polymerase III subunit RPC...		Lus10012787 [exp]	10.1	0.8116

Compare expression of checked genes

Lus10034778 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.