Lus10034780 [FLAX]

| External link |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Symbol | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
Arabidopsis homologues
|
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
Paralogs
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
Poplar homologues |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
| PFAM info |
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
Representative CDS sequence |
>Lus10034780 pacid=23142193 polypeptide=Lus10034780 locus=Lus10034780.g ID=Lus10034780.BGIv1.0 annot-version=v1.0
ATGCAGGGTTTAGTTGCCACCCCTCGCAATATGTACGCTGAACCTGAAGTTGTTGGAGCTCGCCAATTCATCCGAACTAAAATATATGAGATTATATTGC
AGCGGCAGCCTCAGCAAGTTACTGAACAGCAGAAGCAGAGATTTATAGATATTGCCAAACGATTGGAAGATGGTCTATTCAAACATGCCCAGACAAAGGA
GGAGTACTTGAACCTTGGTACCCTAGAAGCTCGTCTGAGCATTTTGCTCAAGCGCACATCTATGAACAGCCAGAATCAACGCCATGCTCAACTTGTCAAC
TCTTCCTCTGCGGCTGGTACTATGATTCCAACCCCTGGGATGTCACACGGCGCGAACTCAAACTTGATGAGTTCTTCTGTTGATCCAACAATGACTTCTT
CTAGTGCAAGTGATACCATAGTGCCTACAGCTGTCACCTCTGCGGGCATGATTCCTAATAGTACTATGCAAGGTGCAATGTCAAATGGGTATCAACAATC
ACCAGCAAATTTTAGTATTAACTCTGGCGCAAACATGTCATCTATGGGCATGCAGAGAATGGGGAGCCAGATGATTCCCACACCTGGATTCAGTAGTAAC
ACTAATAATAATAATCAGTCGTTCATCAATATGAGTTCTTCTAACAGTAGCATTGGGCATTCAACTGCTGAATCTGCAATGTCACAACCACCACAACACA
AGCAATTTGTTGGTGGTCAAAACAGTCGGATACTGCAAACCATTGGCAGCCAAATGGGTAGTAATATCAGGTCTAGTTTGCAAAATAAATCATATGGGTT
CGGAAATGGGTCTTTAAATGGTGGAATGGGGATGATGGGGAACAATATGCAGCTCTTGACTGAACCTGGGGTCTCTGAGGACTATATGACTGAGACTCAG
TATGGAAGTTCACCCAAACCGCTCCAACAGCCCTTTGATCAACATGATCAGCAATTTATTCAGGGTGATGGATATGGCATGAGTTCTTCTGATTCTCTTG
CGTCTGGGAGCTTTTATGGTGCTGTATCATCTGTTGCATCCCTTACCAATGCTCAGAATTTGAGTGGCTTACCGTCGATGTCAAAATCTGTCTCCGGTAT
GGTAAATAATTCTTCAAATTTACATGCAATGCCACAGGCTGCGCTTGTAAGGTCTCAGTCAGCTGAACAGTCTGACAAGGCAAAGTATCCTCCCCAATTA
TTGTCAAGAGATGGGCTCCTACAGTCCCACAAACAGCAGCAGTATCAAAATTCTCATGAGATGCAACAACACTTAATTCAGCAGCAACACCTTCAACAAC
AGCAGCAAAGACAGCAGCACCAGTATTTGTTGAATGCTGATACTTCTTCGCAACCTCGGTTACATTCTGAAATTGGTAATCAAGTAAAGCGCGAGCCTGG
ATTGGAGATCCACAATGAGCTTTTGAACACCAAACCGTCTGAGCAGATCCAAGTCCCTGCATTTCGAAATCAATTTGAACAGAATGTTACTGAAGATCGT
TCCCATGCTTCCCAAGGCGTCTCTCTTGCCCCTGGGCGTGAAGTATATACACCTCAGCAGGCGCAAAATTCACAGCAAATGCAGCAGATGTTGCATATCA
TTGGTCAAACAGTTCTTCAGAACACATCAGAGACACGGAGTGTAGGCAGTAATACAAATTATAGATCTGGCAATCCTAGCCGTGATCGCCAGTTCAGAAA
CCAGCAGAAGTGGCTTTTGTTTTTGCGTCATGCTCGACGATGCACAGCTCCTGAAGGGAAATGCCCAGAGTTTAATTGCATTACTGTTCAAAAGTTGTGT
AGACACATGGACAAATGCAATTCGAAGCCTTGTTCATATCCTCGGTGCCAACACACTAGAACATTACTCCAGCACCAAAAAACTTGCAGGGATGCAGTAT
GCCCTGTTTGCATACCTGTAAAAAATTATCTGGAGAGTCAGTTTAAGGCCCGGCAGCGTCCAACCTTAGATGCTAGTTTGCAGAAGAAGCCCAATGAGAA
TATAGATAATGGACCAAGATTGATTGCAGGAGTTCCTTCTGTGATTGAAACTTCCGAAGATTTAGATCCGTCTTTAAAGCGTATGAAGATAGAGCAGTCT
CTCCAGTCTCTGAAGCCTGAGAGTGAAAATTCAGCTTCTGCAGCTAGTGATGCTCATATGACTCAGGATGTCCCATGTCAGGACTATAAAGACGGTGATG
CTAGTGTGCCTGTGAAAGCTGAGTACATGGAGGTAAAGTTGGTTCCTCTTTCAAGTTCAAGACAAGCTATACCATTACCTAACAGTGTCGAGAAAAAGAT
TGATCCAATGGACTATATAACCAACCAAAGGCCCGACGAAGCAAGTATGCATGTTGAGTCTGGTGATTCAGCTAAGCAGGATAGAATGAAAATTGAAAAG
GAAGCTAATCCTGTCAAGCAAGAGAATATTCTACAACCAGCTGAAAATGGAGCTGGGACCAAATCTGGAAAGCCAAAGATAAAGGGTGTGTCGTTGACTG
AATTATTTACACCTGAGCAAATTAGAGAGCATATTGCTGGCCTCAGGCGTTGGGTTGGTCAGAGCAAGGCAAAAGCTGAAAAGAACCAGGCTATGGAACA
CTCGATGAGTGAAAATTCTTGTCAATTATGTGCTGTTGAAAAGCTTACTTTTGAGCCTCCGCCAATATACTGCACTCCTTGTGGTGCTCGTATTAAACGG
AACGCAATGTATTATACTATGGGAGCTGGTGAGACGCGCCAGTTTTTCTGCATTCCATGTTATAATGAGTCCCGTGGTGAAAGTATTGTTGTTGATGGGA
CTTCCATTCCTAAGGCAAGGCTTGAGAAGAAGAAAAATGATGAAGAGACTGAAGAATGGTGGGTTCAATGTGACAAGTGTGAGGCCTGGCAACATCAAAT
CTGTGCTTTGTTTAATGGTCGGCGCAATGATGGGGGGCAAGCTGAGTATACTTGCCCTAACTGCTATATAGCAGAGATTGAACAAGGAGAGCGCACACCA
TTGCCACAAAGTGCTGTTCTTGGGGCCAAAGATTTACCGAGGACCATACTTAGTGACCAAATAGAACAGCGATTGTTTAAAAAGCTGAAGCAAGAGAGGT
TAGAGAGGGCCAGGGTCCAAGGGAGAAGTTATGATGAGGTTCCGGGAGCAGAAGCACTTGTGGTTCGAGTTGTTTCTTCTGTTGACAAAAAATTAGAAGT
GAAGCAGCGGTTCCTTGAAATATTTCCTGAAGACAACTATCCACTTGAATTCCCATATAAATCTAAGAATATTGAAGGTGTGGAGGTATGCCTGTTTGGT
ATGTATGTGCAAGAATTTGGTTCAGAAGCGCATTTCCCAAATCAACGCCGTGTTTATTTGTCATACCTGGACTCCGTAAAATATTTTAGACCTGAGGTCA
GAGCAGTTACAGGGGAGGCACTTCGCACATTCGTTTATCATGAAATTCTGATTGGATACCTTGAGTACTGCAAGAAAAGAGGTTTTACTAGCTGTTATAT
ATGGGCATGTCCTCCATTAAAGGGCGAAGATTACATTTTGTATTGTCATCCTGAAATCCAGAAAACACCAAAATCTGATAAACTCCGGGAATGGTACCTC
GCAATGTTAAGGAAAGCTGCAAAGGAGAATATAGTGGTTGAACTTACAAATTTATACGACCATTTCTTTATATCTGGTGGTGAATGCAAAGCGAAAGTGA
CAGCTGCCAGGCTCCCTTACTTTGATGGTGACTACTGGCCTGGTGCTGCCGAGGACTTGATTTATCAGCTCAACCAAGACGAAGACGGAAGAAAGCATAA
TAAGAAGGGTACCACTAAAAAAACTATAACTAAGAGGGCCCTGAAAGCATCTGGTCAGTCAGATCTTACTGGTAATGCATCGAAGGATCTGCTGCTGATG
CATAAACTTGGTGAGACAATTTCCCCAATGAAGGAGGATTTTATCATGGTTCATCTCCAGTACTGCTGCACACATTGCTGTACTTTGATGGTATCAGGCA
ACCGATGGGTTTGCAACCAGTGCAAAAATTTCCAAATTTGTGACAGGTGTTATGAAGTTGAACAGAAGCGTGAGGATCGAGAACGACATCCTGTGCACCA
TAGGGAGAAACATGGGCTCTATCCAGTTGAGATAAATGATGTGACTGTTGATACGAAGGACAGGGATGAAATTCTTGAGAGCGAATTCTTTGATACAAGG
CAGGCATTCCTTAGTCTGTGTCAAGGAAATCATTATCAGTATGATACACTTCGTCGTGCTAAACATTCCTCTATGATGATTCTTTATCATCTTCACAATC
CAACTGCTCCTGCTTTTGTGATGACATGCAATGTTTGTCATCTCGATATCGAAACTGGCCAAGGTTGGCGGTGTGAAGTTTGTCCAGAATATGATGTATG
CAATTCTTGTTACCAAAAGGATGGTTGCGTTGACCATCCACATAAACTGACAAACCATCCATCAATTGCTGAGCGTGATGCTCAAAATAAAGAAGCTAGG
CAGCAAAGGGTTCTGCAGCTTAGGAAAATGCTTGATCTTTTGGTGCACGCATCACAATGCCGTTCGCCTCATTGTCAGTACCCAAATTGCCGGAAAGTGA
AAGGGCTTTTCCGACATGGGATACAGTGCAAAACACGTGCATCCGGAGGCTGTGTTCTCTGCAAGAGGATGTGGTATCTCTTGCAACTTCACGCTCGGGC
CTGCAAAGAATCTCAATGTCATGTACCGCGCTGCAGAGATCTGAGAGAACACATAAGAAGATCGCAACAGCAGTCTGATTCTCGTAGGAGAGCCGCTGTG
ATGGAAATGATGCGACAAAGAGCTGCTGAGGTTGCTGGCACCTCAGGGCTTTCTGGAGAAGAGGAAGTAAGAAACACAGTTTTGGTGCGGCTGGGGAATG
AGGCAGTTGCAGGCAGGGGGATACAGTGTTGGAACATAAACAGTTTTGATAATCGGTTTTTGGGTAAGGACCGATTCTTTGATTCATGTCTCCTAGTGTT
CTCTGTAAAGGGTAAGCAAGTTACAGTGAGCAAACCAGAGAAGAAGAGCTGCCTCACTTCTGCGTCAGTAGCAGCTAACTATAGTGTTGTTCCCTACTGG
GAAAATGAATAG
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
AA sequence
|
>Lus10034780 pacid=23142193 polypeptide=Lus10034780 locus=Lus10034780.g ID=Lus10034780.BGIv1.0 annot-version=v1.0
MQGLVATPRNMYAEPEVVGARQFIRTKIYEIILQRQPQQVTEQQKQRFIDIAKRLEDGLFKHAQTKEEYLNLGTLEARLSILLKRTSMNSQNQRHAQLVN
SSSAAGTMIPTPGMSHGANSNLMSSSVDPTMTSSSASDTIVPTAVTSAGMIPNSTMQGAMSNGYQQSPANFSINSGANMSSMGMQRMGSQMIPTPGFSSN
TNNNNQSFINMSSSNSSIGHSTAESAMSQPPQHKQFVGGQNSRILQTIGSQMGSNIRSSLQNKSYGFGNGSLNGGMGMMGNNMQLLTEPGVSEDYMTETQ
YGSSPKPLQQPFDQHDQQFIQGDGYGMSSSDSLASGSFYGAVSSVASLTNAQNLSGLPSMSKSVSGMVNNSSNLHAMPQAALVRSQSAEQSDKAKYPPQL
LSRDGLLQSHKQQQYQNSHEMQQHLIQQQHLQQQQQRQQHQYLLNADTSSQPRLHSEIGNQVKREPGLEIHNELLNTKPSEQIQVPAFRNQFEQNVTEDR
SHASQGVSLAPGREVYTPQQAQNSQQMQQMLHIIGQTVLQNTSETRSVGSNTNYRSGNPSRDRQFRNQQKWLLFLRHARRCTAPEGKCPEFNCITVQKLC
RHMDKCNSKPCSYPRCQHTRTLLQHQKTCRDAVCPVCIPVKNYLESQFKARQRPTLDASLQKKPNENIDNGPRLIAGVPSVIETSEDLDPSLKRMKIEQS
LQSLKPESENSASAASDAHMTQDVPCQDYKDGDASVPVKAEYMEVKLVPLSSSRQAIPLPNSVEKKIDPMDYITNQRPDEASMHVESGDSAKQDRMKIEK
EANPVKQENILQPAENGAGTKSGKPKIKGVSLTELFTPEQIREHIAGLRRWVGQSKAKAEKNQAMEHSMSENSCQLCAVEKLTFEPPPIYCTPCGARIKR
NAMYYTMGAGETRQFFCIPCYNESRGESIVVDGTSIPKARLEKKKNDEETEEWWVQCDKCEAWQHQICALFNGRRNDGGQAEYTCPNCYIAEIEQGERTP
LPQSAVLGAKDLPRTILSDQIEQRLFKKLKQERLERARVQGRSYDEVPGAEALVVRVVSSVDKKLEVKQRFLEIFPEDNYPLEFPYKSKNIEGVEVCLFG
MYVQEFGSEAHFPNQRRVYLSYLDSVKYFRPEVRAVTGEALRTFVYHEILIGYLEYCKKRGFTSCYIWACPPLKGEDYILYCHPEIQKTPKSDKLREWYL
AMLRKAAKENIVVELTNLYDHFFISGGECKAKVTAARLPYFDGDYWPGAAEDLIYQLNQDEDGRKHNKKGTTKKTITKRALKASGQSDLTGNASKDLLLM
HKLGETISPMKEDFIMVHLQYCCTHCCTLMVSGNRWVCNQCKNFQICDRCYEVEQKREDRERHPVHHREKHGLYPVEINDVTVDTKDRDEILESEFFDTR
QAFLSLCQGNHYQYDTLRRAKHSSMMILYHLHNPTAPAFVMTCNVCHLDIETGQGWRCEVCPEYDVCNSCYQKDGCVDHPHKLTNHPSIAERDAQNKEAR
QQRVLQLRKMLDLLVHASQCRSPHCQYPNCRKVKGLFRHGIQCKTRASGGCVLCKRMWYLLQLHARACKESQCHVPRCRDLREHIRRSQQQSDSRRRAAV
MEMMRQRAAEVAGTSGLSGEEEVRNTVLVRLGNEAVAGRGIQCWNINSFDNRFLGKDRFFDSCLLVFSVKGKQVTVSKPEKKSCLTSASVAANYSVVPYW
ENE
|
DESeq2's median of ratios [FLAX]
Coexpressed genes
Lus10034780 coexpression network
*The number of genes in the network is adjusted within 50 genes.*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.