Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G13750 605 / 0 ZIFL1 zinc induced facilitator-like 1 (.1.2.3) AT5G13740 560 / 0 ZIF1 zinc induced facilitator 1 (.1) AT3G43790 538 / 0 ZIFL2 zinc induced facilitator-like 2 (.1.2.3) AT5G13940 86 / 1e-17 aminopeptidases (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10033338 [exp] 836 / 0 AT5G13750 646 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10034847 [exp] 757 / 0 AT5G13750 664 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10033392 [exp] 744 / 0 AT5G13750 659 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10033391 [exp] 711 / 0 AT5G13750 642 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10037341 [exp] 671 / 0 AT5G13750 640 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10035766 [exp] 661 / 0 AT5G13750 622 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10034846 [exp] 620 / 0 AT5G13750 600 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10037425 [exp] 549 / 0 AT3G43790 687 / 0.0 zinc induced facilitator-like 2 (.1.2.3) Lus10000256 [exp] 355 / 4e-121 AT5G13750 318 / 3e-108 zinc induced facilitator-like 1 (.1.2.3)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.008G010600 [exp] 634 / 0 AT5G13750 630 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Potri.016G024400 [exp] 594 / 0 AT5G13750 588 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Potri.006G026200 [exp] 577 / 0 AT5G13750 572 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Potri.010G248401 [exp] 182 / 5e-55 AT5G13750 144 / 2e-41 zinc induced facilitator-like 1 (.1.2.3)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0015 [flax] [poplar] MFS PF07690 [flax] [poplar] MFS_1 Major Facilitator Superfamily
Representative CDS sequence Show only first row Show all	>Lus10034794 pacid=23142191 polypeptide=Lus10034794 locus=Lus10034794.g ID=Lus10034794.BGIv1.0 annot-version=v1.0 ATGGCAGCAGCAGAAGAGTATACAGTTCCACTGTTAAAGAAGCAGTATCATGAGAATTGTCCTGGTTGTAAGGTCGATCAACACAAATATTTGAGTAGAG GATTGCCTATTCGAGAGTTCCTTTCAATATGGATTGTTGTGCTTTGTACAGCTCTCCCAATATCGTCTCTCTTTCCCTATCTTTATTTCATGGTGAGCAT GGAAGTTATGGTTAGGGATTTCAAAATTGCAGAAAAAGAGGAAGACATTGGTTACTATGCTGGATATGTTGGATCCTCGTTTATGTTCGGTAGAGCTTTG ACCTCTTTTGCCTGGGGACTAGTCGCTGATCGCTACGGTCGAAAGCCTGTTATACTGTTTGGAACTATGTCTGTGGTGGTTTTCAACATTCTCTTCGGCC TCAGTACGAAGTTTTGGATGGCAGTTACTGCAAGATTCTTACTTGGATCCTTGAATGGTTTACTTGGACCAATAAAGGCGTATGCAAGCGAACTTTTCAG AGACGAGCATCAAGCATTGGGTTTGTCAACGATTACAACAGCATGGGGTATAGGATTGATCGTTGGTCCAGCTTTAGGAGGTTACCTGGCCCAGCCAGCA GAGAATTACCCAACTCTGTTCTCCAAGGAATCTTTATTTGGGAGGTATCCCTACTTCTTGCCCTCCCTTGCGATAGCGGTTTTTGCCAGTGGAGTGACAA TTGCTTCTTTCTGGCTCCCGGAAACTTTGCACAACCACAAGGAAAATGTGGAACCGTGTCACGACCCTTCTGATGGGCTGGAAACTGCACCTGTCAGTAG TGGTGGATCCAAGGGGGACGACGAGGAATCAGCAAGTGAGCAAAAGGAACCAGCTTCTGAGAAAAGCCTCCTAAGAAATTGGCCTCTAATGTCATCTATC ATCATATATTGCATCTTCTCACTTCATGATATGGCTTACCAAGAGATATTTTCATTATGGGCAGCCAGTCCCAGAAAGCTTGGTGGACTTGGTTATTCCA CACAGAAAGTAGGTGAAGTTCTGGCAGTCTCAGGTCTTGGACTTCTTGTCTTCCAACTTACCCTGTATCCATATGCGGAGAGGCTTTTCGGACCTGTAAT GGTGTGCCGTATTGCTGCTGCATTATCAATTCCATTGTTGGCAAGTTACCCATTTATGTCAAAGTTGACGGGTTTTACCCTAAATCTGCTACTAAATTGC GCATCTATATTGAAGAATCTCCTATCAGTGTCGATCATAACCGGCTTAACTATTCTGCAAAACAATGCAGTGGAGCAGCATCAGAGAGGAGCTGCTAATG GGATCTCAATGACAGGAATGTCTCTGTTCAAAGCAGTTGGTCCGGCTGGAGGAGGTTCTCTGTTTTCATGGGCAGAGAAGCGGCAGGATGCAGTGTTCCT TCCAGGAAATCAAATGGTGTTCTTTGTACTCAACTTGGTTTCGGGGCTTGGCTTGTTGCTCAGTTTCAGGCCTTTCCTATCCTACATTCGCCGCCGCTAG
AA sequence Show only first row Show all	>Lus10034794 pacid=23142191 polypeptide=Lus10034794 locus=Lus10034794.g ID=Lus10034794.BGIv1.0 annot-version=v1.0 MAAAEEYTVPLLKKQYHENCPGCKVDQHKYLSRGLPIREFLSIWIVVLCTALPISSLFPYLYFMVSMEVMVRDFKIAEKEEDIGYYAGYVGSSFMFGRAL TSFAWGLVADRYGRKPVILFGTMSVVVFNILFGLSTKFWMAVTARFLLGSLNGLLGPIKAYASELFRDEHQALGLSTITTAWGIGLIVGPALGGYLAQPA ENYPTLFSKESLFGRYPYFLPSLAIAVFASGVTIASFWLPETLHNHKENVEPCHDPSDGLETAPVSSGGSKGDDEESASEQKEPASEKSLLRNWPLMSSI IIYCIFSLHDMAYQEIFSLWAASPRKLGGLGYSTQKVGEVLAVSGLGLLVFQLTLYPYAERLFGPVMVCRIAAALSIPLLASYPFMSKLTGFTLNLLLNC ASILKNLLSVSIITGLTILQNNAVEQHQRGAANGISMTGMSLFKAVGPAGGGSLFSWAEKRQDAVFLPGNQMVFFVLNLVSGLGLLLSFRPFLSYIRRR

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G13750		ZIFL1	zinc induced facilitator-like ...		Lus10034794 [exp]	0	1
AT3G58640			Mitogen activated protein kina...		Lus10020708 [exp]	7.1	0.8345
AT4G10310		ATHKT1, HKT1	high-affinity K+ transporter 1...		Lus10040598 [exp]	9.9	0.7325
AT5G58160			actin binding (.1)		Lus10024450 [exp]	10.6	0.7999
AT4G34760			SAUR-like auxin-responsive pro...		Lus10007553 [exp]	11.1	0.8097
AT1G28110		SCPL45	serine carboxypeptidase-like 4...		Lus10030315 [exp]	11.3	0.7513
AT3G58640			Mitogen activated protein kina...		Lus10029833 [exp]	12.0	0.8024
AT5G58160			actin binding (.1)		Lus10007447 [exp]	13.8	0.7891
AT5G37020	ARF	ARF8, ATARF8	auxin response factor 8 (.1.2)		Lus10031354 [exp]	15.3	0.8217
AT2G32990		ATGH9B8	glycosyl hydrolase 9B8 (.1)		Lus10030008 [exp]	15.5	0.8026
AT5G02440			unknown protein		Lus10025345 [exp]	19.3	0.7885

Compare expression of checked genes

Lus10034794 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.