Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G13750 529 / 0 ZIFL1 zinc induced facilitator-like 1 (.1.2.3) AT5G13740 498 / 8e-174 ZIF1 zinc induced facilitator 1 (.1) AT3G43790 481 / 2e-167 ZIFL2 zinc induced facilitator-like 2 (.1.2.3) AT5G13940 78 / 5e-15 aminopeptidases (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10034847 [exp] 629 / 0 AT5G13750 664 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10033392 [exp] 625 / 0 AT5G13750 659 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10033338 [exp] 608 / 0 AT5G13750 646 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10037341 [exp] 602 / 0 AT5G13750 640 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10034794 [exp] 597 / 0 AT5G13750 645 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10033391 [exp] 596 / 0 AT5G13750 642 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10035766 [exp] 577 / 0 AT5G13750 622 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10037425 [exp] 520 / 0 AT3G43790 687 / 0.0 zinc induced facilitator-like 2 (.1.2.3) Lus10000256 [exp] 435 / 8e-153 AT5G13750 318 / 3e-108 zinc induced facilitator-like 1 (.1.2.3)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.008G010600 [exp] 592 / 0 AT5G13750 630 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Potri.006G026200 [exp] 556 / 0 AT5G13750 572 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Potri.016G024400 [exp] 537 / 0 AT5G13750 588 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Potri.010G248401 [exp] 153 / 1e-43 AT5G13750 144 / 2e-41 zinc induced facilitator-like 1 (.1.2.3)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0015 [flax] [poplar] MFS PF07690 [flax] [poplar] MFS_1 Major Facilitator Superfamily
Representative CDS sequence Show only first row Show all	>Lus10034846 pacid=23142254 polypeptide=Lus10034846 locus=Lus10034846.g ID=Lus10034846.BGIv1.0 annot-version=v1.0 ATGGCAGACGATTCTACTGTTCCTCTGTTGAAGAAGCAATACTACGAGAATTGTCCAGGTTGCAAGGTTGACCAACGTAAAGAGTTGAACACCGGATGGC CTGTTCGGGAGCTCTTCTCTATATCGATTCTTGTCCTCTCTACAACGCTGCCAATATCTTCTCTGTTTCCTTATCTCTATTTTATGGTTAGGGACTTCGG CATTGCAACACGTGGGGAAGATATTGGTTATTATGCTGGATGCCTTGGTTCCTCATTTATGTTAGCCAGAGCTTTGACATCTGTTGTCTGGGGGCTTGTA GCTGATCGCTATGGTCGAAAGCCAGTTATAATGCTAGGAGTTTCTTTAATGGTTATCTTCAATATTCTCTTTGGCCTCAGCGTGAACTTTTGGATGGCAA TTAGCATGAGGTTTCTTCTTGGGAGTTTGAATGGTTTAATCGGAACAATAAAGGCATATGCTAGTGAACTATTTAGAGAAGATCAGCAAGCCCTGGGTTT GTCAACGGTTAGCACAGCATGGGGTATAGGATTGATCATTGGCCCTGCTCTTGGAGGTTTCCTAGCTCAGCCAGCAGAGAAGTACCCAAATGTATTTTCC GAGGACTCGTTGTTTGGGAGGTTTCCCTACTTATTGCCATGCGTCGCAATATCGATTATTACTCTAGGAGTAACAATTGCATCTTTCTGGCTTCCGGAAA CATTGCATGTACACAAGGACGAGAGGAGTCAGCGCCAAGATTCTTTTGCTGCTCTGGAATCTGCACCTGGTGGTGATGGGTCCAAGGGATATGAGCAGGG ATCAGCTATGGAACCAAAGAAACCAGCTGTTGAGCAAAGCATTCTGAAGAATTGGCCTCTAGTGTCAGCTATTGTAGTTTATTGTGTCTTCTCACTTCAT AATATGGCTTATTCAGAGATATTTTCATTATGGGCTGTCAGCCCTCGAAAGTTTGGTGGACTTGGGTATTCAACGACAGATGTTGGTGAAGTTTTGTCCA TCTCAGGTCTTGGACTTCTTCTGGTCCAACTTGCTTTGTATCCATACATGGAGAGACTTCTTGGACCGGTAATGCTGTCCCGTATTGCTGCGGTTTTGAC CATCGCATTATTGTCAAGTTACCCTTTGCTAACGAGGTTTGAGGGGTTAACTCTACATCTGCTGTTGAATTGTGCTTCTATATTGAAGAATCTTCTATCC GTGTCCATTGCAACTGGCTTGACTATTCTACAAAACAAAGCAGTGGAGCAGCATCAGAGAGGAGCAGCGAATGGCCTTGCTATGACAGCAATGTCTCTAT TCCAAGCTTTTGGCCCCGCTGGCGGGGGCGCTCTGGAAATGATGAAGACTTTGGCTTGCAGATTTTCATGGGGAGAAACGCGTCAGGATTCTGTCTTCCT TCCAGGGAACCAGATGGTGTTCTTCATACTGAATGTGGTGGAGGGAATCGGGTTGCTCCTGACATTTAAGCCTTTCTTGACTCTACGCCAGCCCTCATAG
AA sequence Show only first row Show all	>Lus10034846 pacid=23142254 polypeptide=Lus10034846 locus=Lus10034846.g ID=Lus10034846.BGIv1.0 annot-version=v1.0 MADDSTVPLLKKQYYENCPGCKVDQRKELNTGWPVRELFSISILVLSTTLPISSLFPYLYFMVRDFGIATRGEDIGYYAGCLGSSFMLARALTSVVWGLV ADRYGRKPVIMLGVSLMVIFNILFGLSVNFWMAISMRFLLGSLNGLIGTIKAYASELFREDQQALGLSTVSTAWGIGLIIGPALGGFLAQPAEKYPNVFS EDSLFGRFPYLLPCVAISIITLGVTIASFWLPETLHVHKDERSQRQDSFAALESAPGGDGSKGYEQGSAMEPKKPAVEQSILKNWPLVSAIVVYCVFSLH NMAYSEIFSLWAVSPRKFGGLGYSTTDVGEVLSISGLGLLLVQLALYPYMERLLGPVMLSRIAAVLTIALLSSYPLLTRFEGLTLHLLLNCASILKNLLS VSIATGLTILQNKAVEQHQRGAANGLAMTAMSLFQAFGPAGGGALEMMKTLACRFSWGETRQDSVFLPGNQMVFFILNVVEGIGLLLTFKPFLTLRQPS

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G13750		ZIFL1	zinc induced facilitator-like ...		Lus10034846 [exp]	0	1
AT2G21340			MATE efflux family protein (.1...		Lus10017498 [exp]	4.9	0.8918
AT2G43040		NPG1	no pollen germination 1, tetra...		Lus10029803 [exp]	5.6	0.9134
AT3G20660		4-Oct, ATOCT4	organic cation/carnitine trans...		Lus10013330 [exp]	5.7	0.8841
AT3G62390		TBL6	TRICHOME BIREFRINGENCE-LIKE 6 ...		Lus10002430 [exp]	10.4	0.8925
AT5G20890			TCP-1/cpn60 chaperonin family ...		Lus10012380 [exp]	13.9	0.9008
AT2G28560		ATRAD51B, RAD51...	DNA repair (Rad51) family prot...		Lus10023341 [exp]	16.1	0.8824
AT3G14000		ATBRXL2, BRX-LI...	DZC (Disease resistance/zinc f...		Lus10000884 [exp]	19.4	0.8337
AT3G49650			P-loop containing nucleoside t...		Lus10019245 [exp]	20.8	0.8984
AT3G53850			Uncharacterised protein family...		Lus10024355 [exp]	21.8	0.8750
AT5G16880			Target of Myb protein 1 (.1.2....		Lus10013788 [exp]	25.2	0.8965

Compare expression of checked genes

Lus10034846 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.