Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G13750 614 / 0 ZIFL1 zinc induced facilitator-like 1 (.1.2.3) AT3G43790 561 / 0 ZIFL2 zinc induced facilitator-like 2 (.1.2.3) AT5G13740 556 / 0 ZIF1 zinc induced facilitator 1 (.1) AT5G13940 91 / 5e-19 aminopeptidases (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10033392 [exp] 901 / 0 AT5G13750 659 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10033338 [exp] 786 / 0 AT5G13750 646 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10034794 [exp] 773 / 0 AT5G13750 645 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10033391 [exp] 763 / 0 AT5G13750 642 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10037341 [exp] 708 / 0 AT5G13750 640 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10035766 [exp] 680 / 0 AT5G13750 622 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10034846 [exp] 647 / 0 AT5G13750 600 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10037425 [exp] 582 / 0 AT3G43790 687 / 0.0 zinc induced facilitator-like 2 (.1.2.3) Lus10000256 [exp] 332 / 4e-112 AT5G13750 318 / 3e-108 zinc induced facilitator-like 1 (.1.2.3)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.008G010600 [exp] 659 / 0 AT5G13750 630 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Potri.016G024400 [exp] 613 / 0 AT5G13750 588 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Potri.006G026200 [exp] 606 / 0 AT5G13750 572 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Potri.010G248401 [exp] 187 / 8e-57 AT5G13750 144 / 2e-41 zinc induced facilitator-like 1 (.1.2.3)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0015 [flax] [poplar] MFS PF07690 [flax] [poplar] MFS_1 Major Facilitator Superfamily
Representative CDS sequence Show only first row Show all	>Lus10034847 pacid=23142156 polypeptide=Lus10034847 locus=Lus10034847.g ID=Lus10034847.BGIv1.0 annot-version=v1.0 ATGGCGGCAGCAGAAGAGTATACAGTTCCATTGTTAGAGAAGCAGTATTATGAGAATTGTCCTGGTTGTAAGGTCGATCATCACAAATATTTGAGAAGAG GATTGCCTATCCGAGAGTTTCTTTCTATATGGATTGTTGTGCTTTGTACAGCTCTCCCAATATCGTCTCTCTTTCCCTATCTTTATTTCATGGTTAGGGA TTTCAAGATTGCAGAAAAAGAGGAGGACATTGGTTACTATGCTGGATATATTGGGTCCTCATTTATGTTCGGTAGAGCTTTGACTTCTGTTTTCTGGGGA CTAGTAGCTGATCGCTACGGTCGAAAGCCAGTTATACTTTTTGGAACTTCTTCTGTGGTGATTTTCAACACTCTCTTCGGCCTCAGCACAAACTTTTGGA TGGCTATTGTCTCAAGATTCTTACTTGGAAGCTTGAATGGTCTACTTGGACCAATAAAGGCGTATGCAAGCGAACTTTTCAGAGAGGAACATCAAGCATT GGGTTTGTCAACGATTTCAACAGCATGGGGTATAGGATTGATTATTGGTCCAGCTTTAGGAGGTTTCCTCGCCCAGCCAGCAGTGAATTACCCAACCCTG TTCTCCGAGGATTCTTTGTTTGGGAGGTTCCCCTACTTCTTGCCCTCCCTTGCCATTTCGGTGTTTGCTCTTGGAGTAACAATCGCTTCTTTCTGGCTCC CGGAAACGTTGCATAACCACAAGGAAAATATGAAACCATGTGACCACTCTGCCGATGCGTCGGAAACTGCAACTGGAAGCTGTGGTGGATTAAAGGAAGG CGACGAGGAGTCAGCGGTTGAGCCAGAGAAGCCCGCTCCCAAGACAAGCCTCCTAAAAAATTGGCCACTAATGTCATCTATCATCGTATATTGCATCTTC TCACTTCATGATATGGCTTACACGGAGATATTCTCGTTGTGGGCAGTCAGCCCCCGAAAGCTTGGTGGACTTAGTTATTCCACGCGGGATGTTGGTGAAG TGCTAGCAGTTTCAGGTGCTGGACTGCTTGTGTTCCAACTGGCCCTGTATCCATATGCGGAGAGGCTTTTTGGACCTGTGATGGTGAGCCGTATTGCTGC TGTATTATCCATACCGTTGTTAGCAAGTTACCCATATCTGTCAAAGTTGACAGGTTTCACTCTGAGTATACTGGTAAACTGCGCATCTGTATTGAAGAAT CTACTATCAGTATCGATTGTAACGGGCTTGTTTATTCTGCAAAACAATGCAGTGGAGCAGCATCAGAGAGGAGCTGCTAATGGGATATCAATGACAGCAA TGTCTCTGTTTAAAGCTGTTGGTCCAGCTGGAGGAGGTTCTCTGTTTTCATGGGCAGAGACACGTCAGGATGCAGGGTTCCTTCCAGGGAACCAAATGGT GTTCTTTATACTCAACTTGGTGGAGGGGCTTGGCTTGTTGTTCCTGTTCAGGCCTTTCCTATCCCACCCTCGCCGCCGGTAG
AA sequence Show only first row Show all	>Lus10034847 pacid=23142156 polypeptide=Lus10034847 locus=Lus10034847.g ID=Lus10034847.BGIv1.0 annot-version=v1.0 MAAAEEYTVPLLEKQYYENCPGCKVDHHKYLRRGLPIREFLSIWIVVLCTALPISSLFPYLYFMVRDFKIAEKEEDIGYYAGYIGSSFMFGRALTSVFWG LVADRYGRKPVILFGTSSVVIFNTLFGLSTNFWMAIVSRFLLGSLNGLLGPIKAYASELFREEHQALGLSTISTAWGIGLIIGPALGGFLAQPAVNYPTL FSEDSLFGRFPYFLPSLAISVFALGVTIASFWLPETLHNHKENMKPCDHSADASETATGSCGGLKEGDEESAVEPEKPAPKTSLLKNWPLMSSIIVYCIF SLHDMAYTEIFSLWAVSPRKLGGLSYSTRDVGEVLAVSGAGLLVFQLALYPYAERLFGPVMVSRIAAVLSIPLLASYPYLSKLTGFTLSILVNCASVLKN LLSVSIVTGLFILQNNAVEQHQRGAANGISMTAMSLFKAVGPAGGGSLFSWAETRQDAGFLPGNQMVFFILNLVEGLGLLFLFRPFLSHPRRR

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G13750		ZIFL1	zinc induced facilitator-like ...		Lus10034847 [exp]	0	1
AT2G37050			Leucine-rich repeat protein ki...		Lus10004275 [exp]	1.4	0.9814
					Lus10014873 [exp]	2.0	0.9681
AT4G12010			Disease resistance protein (TI...		Lus10008221 [exp]	4.0	0.9577
AT2G37050			Leucine-rich repeat protein ki...		Lus10019237 [exp]	4.7	0.9704
AT4G37320		CYP81D5	"cytochrome P450, family 81, s...		Lus10000038 [exp]	4.9	0.9681
AT3G26170		CYP71B19	"cytochrome P450, family 71, s...		Lus10018261 [exp]	5.9	0.9680
AT2G20080			unknown protein		Lus10034960 [exp]	6.0	0.9502
AT1G70830		MLP28	MLP-like protein 28 (.1.2.3.4....		Lus10020498 [exp]	6.5	0.9647
AT1G62560		FMOGS-OX3 ,FMO ...	flavin-monooxygenase glucosino...		Lus10024609 [exp]	6.7	0.9585
AT5G43540	C2H2ZnF		C2H2 and C2HC zinc fingers sup...		Lus10033867 [exp]	6.9	0.9667

Compare expression of checked genes

Lus10034847 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.