Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G42030 87 / 2e-21 ABIL4 ABL interactor-like protein 4 (.1) AT2G46225 73 / 5e-16 ABIL1, ABI1L1 ABI-1-like 1 (.1.2.3) AT3G49290 69 / 1e-14 ABIL2 ABL interactor-like protein 2 (.1.2) AT5G24310 65 / 3e-13 ABIL3 ABL interactor-like protein 3 (.1.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10023654 [exp] 218 / 5e-72 AT5G42030 91 / 3e-21 ABL interactor-like protein 4 (.1) Lus10043223 [exp] 151 / 4e-43 AT2G32230 433 / 2e-142 proteinaceous RNase P 1 (.1) Lus10011102 [exp] 147 / 1e-41 AT4G29010 1043 / 0.0 ABNORMAL INFLORESCENCE MERISTEM, Enoyl-CoA hydratase/isomerase family (.1) Lus10002151 [exp] 75 / 1e-16 AT2G46225 370 / 2e-129 ABI-1-like 1 (.1.2.3) Lus10008737 [exp] 75 / 2e-16 AT2G46225 377 / 5e-132 ABI-1-like 1 (.1.2.3) Lus10005919 [exp] 70 / 9e-15 AT5G24310 400 / 2e-140 ABL interactor-like protein 3 (.1.2) Lus10022393 [exp] 60 / 3e-11 AT5G24310 360 / 2e-125 ABL interactor-like protein 3 (.1.2) Lus10032421 [exp] 56 / 1e-09 AT3G49290 171 / 2e-51 ABL interactor-like protein 2 (.1.2) Lus10023052 [exp] 47 / 5e-07 AT5G24310 101 / 7e-27 ABL interactor-like protein 3 (.1.2)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.018G082600 [exp] 130 / 3e-38 AT2G46225 94 / 1e-22 ABI-1-like 1 (.1.2.3) Potri.002G165900 [exp] 77 / 2e-17 AT2G46225 397 / 5e-140 ABI-1-like 1 (.1.2.3) Potri.014G092300 [exp] 77 / 2e-17 AT2G46225 396 / 1e-139 ABI-1-like 1 (.1.2.3) Potri.003G142800 [exp] 76 / 6e-17 AT3G49290 292 / 3e-98 ABL interactor-like protein 2 (.1.2) Potri.012G016900 [exp] 67 / 1e-13 AT3G49290 353 / 5e-122 ABL interactor-like protein 2 (.1.2) Potri.001G088100 [exp] 60 / 4e-11 AT3G49290 265 / 9e-88 ABL interactor-like protein 2 (.1.2)
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10034928 pacid=23181399 polypeptide=Lus10034928 locus=Lus10034928.g ID=Lus10034928.BGIv1.0 annot-version=v1.0 ATGTTTGACGCAGAGCTTGGTTCTCCAATTTCAATGGTTCCGGGTCTGGAGCTTAAGGAGTTGAAGTCTCAGCTCCATAATGCAGCAGCTTACTGCGAGA AGAGTTTTCTCAAGTCCAACGACAAGAAAAAGATACTGGAGAGCACAAAAGAGTACGTCTGCAGTGCCGTTGTAACAGTTGTGGATCATTTGGGCAGTGT TTCAGCCAATCTGAACATCACCATTTCTGACAATGCTACTGGCTTCTCTGAAGCTGAACTCAGGATACATTCCTTGAAGCAAAGATTTCTTGCGTATGAA CTGTACGCACAGAAGATTGCACTGACTAGGACAAGATGGAGCCGCAACTTCCCAAAATCACAACCCCGCTATCTCTGGACACGTAAGGGTTCTTTTTGCC GTCCAATTGATTCGAGTAACGTTGAGGTTCGACCAATAGAATAA
AA sequence Show only first row Show all	>Lus10034928 pacid=23181399 polypeptide=Lus10034928 locus=Lus10034928.g ID=Lus10034928.BGIv1.0 annot-version=v1.0 MFDAELGSPISMVPGLELKELKSQLHNAAAYCEKSFLKSNDKKKILESTKEYVCSAVVTVVDHLGSVSANLNITISDNATGFSEAELRIHSLKQRFLAYE LYAQKIALTRTRWSRNFPKSQPRYLWTRKGSFCRPIDSSNVEVRPIE

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G42030		ABIL4	ABL interactor-like protein 4 ...		Lus10034928 [exp]	0	1
AT1G74670		GASA6	GA-stimulated Arabidopsis 6, G...		Lus10008612 [exp]	2.0	0.8464
AT2G32580			Protein of unknown function (D...		Lus10029975 [exp]	2.4	0.8106
AT5G50335			unknown protein		Lus10008207 [exp]	6.2	0.8170
AT1G62400		HT1	high leaf temperature 1, Prote...		Lus10002374 [exp]	11.0	0.7737
AT4G35690			Arabidopsis protein of unknown...		Lus10041834 [exp]	13.3	0.7192
AT2G26730			Leucine-rich repeat protein ki...		Lus10001900 [exp]	16.1	0.7764
AT1G67400			ELMO/CED-12 family protein (.1...		Lus10037017 [exp]	17.1	0.7709
AT4G25050		ACP4	acyl carrier protein 4 (.1.2)		Lus10037910 [exp]	17.9	0.7183
AT5G58300			Leucine-rich repeat protein ki...		Lus10003891 [exp]	18.0	0.6872
AT4G03110		AtRBP-DR1	RNA-binding protein-defense re...		Lus10040910 [exp]	23.7	0.7348

Compare expression of checked genes

Lus10034928 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.