Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G51980 568 / 0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) AT3G16480 553 / 0 MPPALPHA mitochondrial processing peptidase alpha subunit (.1) AT3G02090 172 / 3e-47 MPPBETA Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10012926 [exp] 710 / 0 AT3G16480 504 / 3e-173 mitochondrial processing peptidase alpha subunit (.1) Lus10025839 [exp] 622 / 0 AT1G51980 643 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Lus10038262 [exp] 618 / 0 AT1G51980 637 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Lus10040886 [exp] 162 / 9e-44 AT3G02090 869 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Lus10004939 [exp] 162 / 1e-43 AT3G02090 869 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Lus10040885 [exp] 161 / 3e-43 AT3G02090 869 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Lus10004938 [exp] 102 / 8e-24 AT3G02090 546 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.010G036700 [exp] 687 / 0 AT1G51980 592 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Potri.008G193200 [exp] 686 / 0 AT1G51980 592 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Potri.001G191100 [exp] 619 / 0 AT1G51980 620 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Potri.017G092400 [exp] 160 / 4e-43 AT3G02090 832 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2) Potri.004G118900 [exp] 158 / 2e-42 AT3G02090 822 / 0.0 Insulinase (Peptidase family M16) protein (.1), Insulinase (Peptidase family M16) protein (.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0094 [flax] [poplar] Peptidase_ME PF00675 [flax] [poplar] Peptidase_M16 Insulinase (Peptidase family M16) CL0094 [flax] [poplar] Peptidase_ME PF05193 [flax] [poplar] Peptidase_M16_C Peptidase M16 inactive domain
Representative CDS sequence Show only first row Show all	>Lus10035000 pacid=23181386 polypeptide=Lus10035000 locus=Lus10035000.g ID=Lus10035000.BGIv1.0 annot-version=v1.0 ATGTACAGAGCCGCAGCTTCTCGCCTTAGGTCTCTCAAGGGGCGTACAAGCACTAGGTCACCTGCACGATTTGCAAGCTCCAGTGCTGCAGTCCTGCAGT CATCCTCTTCTGGCGGTCTCTTCAGCTGGCTGACTGGTAGGAGTTCCAACTCTTCAGTGCCTCTAGATTTTCAATATCCTGGAGTCCAGCTCCCACCACC ACTACCTGATCTTGTTGAACCTGGAAAAACCAAGATCACTACTCTCCCTAATGGCGTCAAAATTGCCTCTGAAACATCTCCGAATCCTGCAGCATCAATA GGACTGTACATTGATTGTGGCTCGATATATGAGTCACCAGACACATGTGGAGCCACCCATCTCCTGGAGAGAATGACCTTTAAAAGTACAAGAAACCGCA GCCATTTGCGTGTAGTGCGAGAAGTGGAAGCAGTTGGGGGTGTTGTGCAAGCCTCAGCATCTCGTGAGCAAATGGGATACACTTTTGATGCTCTGAAGAC TTATGTACCTGAGATGGTGGAGCTGCTAATTGATAGTGTGAGGAACCCTGTCTTCCTAGATTGGGAGGTCAATGAACAGCTTCAGAAGGTGAAATCTGAG ATTAGCGAAGCTTCTAATAATCCACATGGCTTACTCTTGGAAGCAGTTCACTCAGCTGGTTTTTCTGGTGCACTGGCAAATCCTCTTTTAGCTCCAGAAT CTGCAATAAACAGGCTGAATGGTGCACTCTTGGAGGAGTTTGTCGCCGAAAATTATACTGCCTCACGGATGGTACTTGCGGCTTCTGGTGTTGATCATGA GGAACTGGTATCCATTGCTGAGCCTCTTCTGTCTGACCTACCTGAAATTCCAAGGAACTCTGAGCCTCAATCTGTTTATACTGGAGGTGACTTCCGTTGT CAAGCAGGCTCAGGGGATTTGATGACCCATTTTGCTCTTGCATTTGAATTACCTGGTGGTTGGCATCAGGACAAGGATGCGATGACTTTGACTGTTCTTC AGATGTTAATGGGAGGTGGTGGTTCGTTCTCTAGTGGAGGCCCTGGAAAGGGATTGTACTCAAGACTATATCTCAATGTCTTGAGCCAATGTCCACCGAT CCAGTCATTCTCCGCGTTCAACAATATTTACAACAGAACTGCCATATTTGGCATCCAAGCAACCACTACTCCAGATTTTGCAGCAAAAGCAATTGATGTA GCTGTAAGAGAACTGATTGCAGTTGCCACGCCTGGTGAAGTTGACTCTTTGCAATTGGCCCGTGCTAAACAGGCAACAAAATCTGCCATTTTGATGAATT TGGAGTCTCGAATGGTTGCTTCTGAAGACATTGGCAGACAAATTTTGACATATAGTGAAAGAAAACCTGTGGAGCATTTCTTGAAAGCCATAGACGGAAT TACAGAGCAGGATATTACCAAGGTTGCGCAAAAGCTCCTTTCTTCCCCTCTGACGATGGCTTCATACGGAGATGTTATCAACGTTCCAACTTATGATTAT GTGAGTGGCAAGTTCAAGTCAAAGTGA
AA sequence Show only first row Show all	>Lus10035000 pacid=23181386 polypeptide=Lus10035000 locus=Lus10035000.g ID=Lus10035000.BGIv1.0 annot-version=v1.0 MYRAAASRLRSLKGRTSTRSPARFASSSAAVLQSSSSGGLFSWLTGRSSNSSVPLDFQYPGVQLPPPLPDLVEPGKTKITTLPNGVKIASETSPNPAASI GLYIDCGSIYESPDTCGATHLLERMTFKSTRNRSHLRVVREVEAVGGVVQASASREQMGYTFDALKTYVPEMVELLIDSVRNPVFLDWEVNEQLQKVKSE ISEASNNPHGLLLEAVHSAGFSGALANPLLAPESAINRLNGALLEEFVAENYTASRMVLAASGVDHEELVSIAEPLLSDLPEIPRNSEPQSVYTGGDFRC QAGSGDLMTHFALAFELPGGWHQDKDAMTLTVLQMLMGGGGSFSSGGPGKGLYSRLYLNVLSQCPPIQSFSAFNNIYNRTAIFGIQATTTPDFAAKAIDV AVRELIAVATPGEVDSLQLARAKQATKSAILMNLESRMVASEDIGRQILTYSERKPVEHFLKAIDGITEQDITKVAQKLLSSPLTMASYGDVINVPTYDY VSGKFKSK

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G51980			Insulinase (Peptidase family M...		Lus10035000 [exp]	0	1
AT4G35300		TMT2	tonoplast monosaccharide trans...		Lus10022988 [exp]	3.2	0.7739
AT3G43220			Phosphoinositide phosphatase f...		Lus10027650 [exp]	8.4	0.7311
AT4G05020		NDB2	NAD(P)H dehydrogenase B2 (.1),...		Lus10018427 [exp]	10.5	0.7190
AT2G19160			Core-2/I-branching beta-1,6-N-...		Lus10025464 [exp]	18.8	0.6708
AT4G30190		PMA2, AHA2	PLASMA MEMBRANE PROTON ATPASE ...		Lus10001437 [exp]	22.2	0.6498
AT1G61100			disease resistance protein (TI...		Lus10011217 [exp]	23.7	0.6882
AT3G25800		PP2AA2, PR65, P...	protein phosphatase 2A subuni...		Lus10034299 [exp]	25.8	0.6964
AT5G01460			LMBR1-like membrane protein (....		Lus10035505 [exp]	27.1	0.7044
AT1G07670		ATECA4	endomembrane-type CA-ATPase 4 ...		Lus10038484 [exp]	30.4	0.7167
AT1G51540			Galactose oxidase/kelch repeat...		Lus10033376 [exp]	30.6	0.6862

Compare expression of checked genes

Lus10035000 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.