Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G01910 806 / 0 ATMAP65-6 Microtubule associated protein (MAP65/ASE1) family protein (.1), Microtubule associated protein (MAP65/ASE1) family protein (.2) AT1G14690 781 / 0 MAP65-7 microtubule-associated protein 65-7 (.1.2) AT4G26760 485 / 1e-165 MAP65-2 microtubule-associated protein 65-2 (.1) AT5G55230 477 / 3e-162 ATMAP65-1 microtubule-associated proteins 65-1 (.1.2) AT1G27920 390 / 4e-129 MAP65-8 microtubule-associated protein 65-8 (.1) AT5G51600 392 / 1e-127 ATMAP65-3, PLE PLEIADE, ARABIDOPSIS THALIANA MICROTUBULE-ASSOCIATED PROTEIN 65-3, Microtubule associated protein (MAP65/ASE1) family protein (.1) AT2G38720 385 / 9e-127 MAP65-5 microtubule-associated protein 65-5 (.1) AT3G60840 374 / 1e-121 MAP65-4 microtubule-associated protein 65-4 (.1) AT5G62250 322 / 9e-103 MAP65-9 microtubule-associated protein 65-9 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10031939 [exp] 1203 / 0 AT2G01910 838 / 0.0 Microtubule associated protein (MAP65/ASE1) family protein (.1), Microtubule associated protein (MAP65/ASE1) family protein (.2) Lus10032567 [exp] 476 / 1e-160 AT5G55230 850 / 0.0 microtubule-associated proteins 65-1 (.1.2) Lus10043178 [exp] 459 / 9e-154 AT5G55230 847 / 0.0 microtubule-associated proteins 65-1 (.1.2) Lus10015684 [exp] 449 / 2e-149 AT5G51600 759 / 0.0 PLEIADE, ARABIDOPSIS THALIANA MICROTUBULE-ASSOCIATED PROTEIN 65-3, Microtubule associated protein (MAP65/ASE1) family protein (.1) Lus10037691 [exp] 441 / 2e-146 AT5G51600 768 / 0.0 PLEIADE, ARABIDOPSIS THALIANA MICROTUBULE-ASSOCIATED PROTEIN 65-3, Microtubule associated protein (MAP65/ASE1) family protein (.1) Lus10026114 [exp] 432 / 8e-145 AT2G38720 553 / 0.0 microtubule-associated protein 65-5 (.1) Lus10008705 [exp] 426 / 1e-142 AT2G38720 565 / 0.0 microtubule-associated protein 65-5 (.1) Lus10041635 [exp] 398 / 1e-131 AT2G38720 550 / 0.0 microtubule-associated protein 65-5 (.1) Lus10015789 [exp] 375 / 1e-122 AT1G27920 673 / 0.0 microtubule-associated protein 65-8 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.008G139700 [exp] 917 / 0 AT2G01910 778 / 0.0 Microtubule associated protein (MAP65/ASE1) family protein (.1), Microtubule associated protein (MAP65/ASE1) family protein (.2) Potri.011G092500 [exp] 503 / 2e-172 AT5G55230 863 / 0.0 microtubule-associated proteins 65-1 (.1.2) Potri.001G356500 [exp] 483 / 5e-165 AT5G55230 853 / 0.0 microtubule-associated proteins 65-1 (.1.2) Potri.003G173300 [exp] 424 / 7e-142 AT1G27920 655 / 0.0 microtubule-associated protein 65-8 (.1) Potri.003G192400 [exp] 421 / 7e-141 AT2G38720 555 / 0.0 microtubule-associated protein 65-5 (.1) Potri.015G131400 [exp] 419 / 5e-138 AT5G51600 728 / 0.0 PLEIADE, ARABIDOPSIS THALIANA MICROTUBULE-ASSOCIATED PROTEIN 65-3, Microtubule associated protein (MAP65/ASE1) family protein (.1) Potri.014G070100 [exp] 404 / 2e-132 AT5G51600 451 / 5e-149 PLEIADE, ARABIDOPSIS THALIANA MICROTUBULE-ASSOCIATED PROTEIN 65-3, Microtubule associated protein (MAP65/ASE1) family protein (.1) Potri.001G055100 [exp] 400 / 4e-132 AT1G27920 623 / 0.0 microtubule-associated protein 65-8 (.1) Potri.012G129600 [exp] 393 / 7e-128 AT5G51600 761 / 0.0 PLEIADE, ARABIDOPSIS THALIANA MICROTUBULE-ASSOCIATED PROTEIN 65-3, Microtubule associated protein (MAP65/ASE1) family protein (.1) Potri.006G269800 [exp] 141 / 1e-39 AT5G51600 186 / 2e-56 PLEIADE, ARABIDOPSIS THALIANA MICROTUBULE-ASSOCIATED PROTEIN 65-3, Microtubule associated protein (MAP65/ASE1) family protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF03999 [flax] [poplar] MAP65_ASE1 Microtubule associated protein (MAP65/ASE1 family)
Representative CDS sequence Show only first row Show all	>Lus10035099 pacid=23162524 polypeptide=Lus10035099 locus=Lus10035099.g ID=Lus10035099.BGIv1.0 annot-version=v1.0 ATGCTGGCAATTGGGAGTCCCAATTTCTCCACTAGTATGCGTACAAGCACCAGTTATAACGCTTTGCTCAGAGAGCTCCAGGTTCTCCTCTTTTGCTTTG CTTTATCTGTTAAAAATGAAAAGCAAATATGGAATGAAATCGGAGAGAGTGAGGCTGAAAGGGGACGCATGCTGATAGACTTGGAAAGGGAGTGCTTAGC AGTTTATCAGAGGAAAGTAGAAGATGCTGCTAATTCCAAAGCACGCCTTCATCACTCAGTTGCAGCTAAGGAAGCCGAACTTGCCACCCTCATGGCAGCC CTTGGAGAGCTTAACATTCATTCGCCGATGCAGAAGGATAAGAAGACCATGTCATTAAAAGAGAAACTTGCATCTGTTTCACCGTTGGTGGATGACTTGA AGATGAAGAAAGAGGAGCGGATGAAGCAATTCGATGATATAAAGGCACAGATTGAGAAAATCAGTGGGGAGATATCTGGGTATAGTAGTGTCAACAACTC TATGATGAGTAGTCTGTCTCTTGATGAACATGACTTGTCAATGAGGAAGCTAAACGAATATCAGACACATCTACGAACCCTTCAAAAGGAGAAGTCGGAC CGTCTCAATAAGGTCTTTGAATGTGTGAATGAGGTGCATTCTCTCTGCAGCGTGCTTGGTTTGGATTTTGGAAAGTCTGTTAGTGAGGTCCATCCAAGTT TGCACGGAGCTAACCAAGAACAATCAACTAATATAAGTAACAGTACGCTTGAGGGTCTAGAACAGACCATTCTGAAATTGAAAACTGAACGGAAAGCTCG AATCCAGAAGCTGAAAGATATTGGAGCTTCATTACTTGAGCTTTGGAATTTGATGGACTCGTCAAAAGCAGATAAGAACAAGTTCTCAAGAATTACTTCC ATTCTTGGGTCATCAGAGTCTGAGATAGTAGAACCTGGATTTCTTTCAATGGAGACAATTAATAAGGCATCTGTGGAAGTGGAAAGACTCACTAAACTGA AAGCCAGCAGAATGAAAGAGCTTGTTATGAAGAAAATAGTAGAACTGGAAGAGATATGCAAAATGACTCACATTGAACCCGACACAAGTACTTCAGCTGA GAAGTCCACTGCACTAATAGATTCTGGTTTAGTTGATCCTGGTGAACTCTTGGCAAACACTGATGAACAAATAACCAAAGCAAAGGAGCAAGCTATGAGC AGGAAAGAGATAATGGATAGGATAGACAGATGGCTTGCAGCATTCGAAGAGGAAAATTGGCTTGAAGACTATGAGCTTGATAACAACAAATATTCGGCTG GAAGAGGGGTTCATATTAACTTAAAGCGTGCAGAGAAAGCTCGAATTACTGTGAACAAGATTCCAGCGATGGTTGACAATCTGATAAGCAGAACTTTGAT CTGGGAAGATGATATGAAGATGCTGTTCCTTTATGATGGGGTGAGACTGGTTTCAATACTAGAAGATTACAAAATGACAAGACAGCATAGACAAGACGAG AAGCGAAGATTCAGGGACCAAAAGAAGCTCCAAGATTTGTTGCTAACAGAGAAGGAATTGATGTACGGGTCTAAACCAAGTCCACGAAGGACAAACAGCT TCAGGAAGCCGAACGGTTATCGTGGAAATGGGTCGATGACTCCGACACCACGCCGCAATTCTATATGTGGAACTCCTCCTGAACCCCTCACTCCACGGTC GTATTCAGGGCGGAATAATGGATATTTCAAGGAAATGAGGAGGTTATCAACTACTCCGTTGAACTTTGTGGTGATAACGAAAGAAGATACCATGTCATTC GCCTCAATTTCCGGTTCAGAGCCGGGATCCCCTCATAGCTAA
AA sequence Show only first row Show all	>Lus10035099 pacid=23162524 polypeptide=Lus10035099 locus=Lus10035099.g ID=Lus10035099.BGIv1.0 annot-version=v1.0 MLAIGSPNFSTSMRTSTSYNALLRELQVLLFCFALSVKNEKQIWNEIGESEAERGRMLIDLERECLAVYQRKVEDAANSKARLHHSVAAKEAELATLMAA LGELNIHSPMQKDKKTMSLKEKLASVSPLVDDLKMKKEERMKQFDDIKAQIEKISGEISGYSSVNNSMMSSLSLDEHDLSMRKLNEYQTHLRTLQKEKSD RLNKVFECVNEVHSLCSVLGLDFGKSVSEVHPSLHGANQEQSTNISNSTLEGLEQTILKLKTERKARIQKLKDIGASLLELWNLMDSSKADKNKFSRITS ILGSSESEIVEPGFLSMETINKASVEVERLTKLKASRMKELVMKKIVELEEICKMTHIEPDTSTSAEKSTALIDSGLVDPGELLANTDEQITKAKEQAMS RKEIMDRIDRWLAAFEEENWLEDYELDNNKYSAGRGVHINLKRAEKARITVNKIPAMVDNLISRTLIWEDDMKMLFLYDGVRLVSILEDYKMTRQHRQDE KRRFRDQKKLQDLLLTEKELMYGSKPSPRRTNSFRKPNGYRGNGSMTPTPRRNSICGTPPEPLTPRSYSGRNNGYFKEMRRLSTTPLNFVVITKEDTMSF ASISGSEPGSPHS

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G01910		ATMAP65-6	Microtubule associated protein...		Lus10035099 [exp]	0	1
AT2G01910		ATMAP65-6	Microtubule associated protein...		Lus10031939 [exp]	1.0	0.9456
AT3G51950	C3HZnF		Zinc finger (CCCH-type) family...		Lus10039575 [exp]	2.0	0.9050
AT5G18610			Protein kinase superfamily pro...		Lus10041426 [exp]	2.4	0.8704
AT2G31350		GLX2-5	glyoxalase 2-5 (.1.2)		Lus10018625 [exp]	5.5	0.8435
AT5G56270	WRKY	ATWRKY2, WRKY2,...	ARABIDOPSIS THALIANA WRKY DNA-...		Lus10027139 [exp]	6.9	0.8354
AT2G20310		RIN13	RPM1 interacting protein 13 (....		Lus10025944 [exp]	7.1	0.7741
AT4G22200		AKT3, AKT2/3	potassium transport 2/3 (.1)		Lus10019944 [exp]	8.7	0.8544
AT1G54130		AT-RSH3, RSH3, ...	RELA/SPOT homolog 3 (.1)		Lus10002139 [exp]	8.9	0.8447
AT5G47650		ATNUDX2, ATNUDT...	ARABIDOPSIS THALIANA NUDIX HYD...		Lus10039079 [exp]	9.5	0.8376
AT5G01850			Protein kinase superfamily pro...		Lus10025236 [exp]	9.9	0.8138

Compare expression of checked genes

Lus10035099 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.