Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G15680 3033 / 0 ARM repeat superfamily protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10019255 [exp] 3099 / 0 AT5G15680 3488 / 0.0 ARM repeat superfamily protein (.1) Lus10031961 [exp] 2694 / 0 AT5G15680 2930 / 0.0 ARM repeat superfamily protein (.1) Lus10031962 [exp] 1310 / 0 AT5G15680 1224 / 0.0 ARM repeat superfamily protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.017G106100 [exp] 3147 / 0 AT5G15680 3580 / 0.0 ARM repeat superfamily protein (.1)
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10035141 pacid=23162487 polypeptide=Lus10035141 locus=Lus10035141.g ID=Lus10035141.BGIv1.0 annot-version=v1.0 ATGAAAGTTGGATACCCTCTGGTTACTCTCCTTCTCTGTCTTGGTGATCCTCAAATATTCTACAGCAACCTAAGCCCACACATGGAGCAAATTTACAAGA TTTTAGGAAAGGACAAGAACCATCGTTTCGTGGCTTTAGACTGCCTTCATCGAGTTATGAGATTTTACTTGAATGTTCATGCAGCTAGTCAGCCCCCGAA CCGTATATGGGACTACCTTGACAGTGTGACTTCTCATCTCTTAACAAATATACGGAAAGGAACATTTACACAAGATGTACAACATGATAAAATTGTTGAA TTCTGCGTGACGATTGCCGAGCATAACCTCGATTTCGCCATGAACCATATGATCTTAGAGTTGGTAAAGCAAGATAGTCCGAGTGATGCAAAAGTAATTG GTCTTCGTGCTTTGCTTGACATTGTCATGTCACCTTCCAGCCCATATGTTGGTTTAGAAATATTCAAAGGACATGACATCGGTCACTATATACCCAAAGT GAAGGCAGCAATTGAATCAATTTTGAGATCTTGTCATAGAGTCTACGGTCAGGCACTTTTGACTTCTTCCAAAACCTCCATAGATGCTGTAACCAAGGAA AAGTCTCAAGGATACCTCTTCCGTTCTGTCTTGAAGTGTATACCATATCTGATAGAAGAAGTTGGGCGAAGTGATAAGATCACTGAAATCATTCCTCAGC ATGGTATTAGTATTGATCCTGGGGTCCGTGAGGAAGCTGTACAAGTTTTGAACCGGATTGTTAGATATCTTCCGCATCGCCGGTTTGCAGTTATGAGAGG GATGGCAAACTTTATCCTTCGGCTCCCAGATGAATTCCCACTTCTCATTCAGACATCATTAGGACGTCTGTTAGATCTGATGCGTTTTTGGAGAGCTTGT TTGGTTGATGATAGATTAGATAACAGTGCTGATGAAAGGAAGCGAGTGCCACAGAGAAATGAAGGATTTAAGAAATCTTCTTTCCATCACTCTGACGTGA TCGAGTTTCGTGCATCAGACATAGACGCTGTTGGATTGATCTTTCTTAGTTCTGTGGATAGCCAAATTAGGCACACAGCACTGGAGCTACTGCGTTGTGT CCGTGCCTTATGGAATGATATACGAGACCTGACAGTATATGTGCAGCTGGAGCAGAACCTGAGATGTGAAGCAGAACCAATATTTATTATTGATGTCCTA GAAGAACATGGGGATGACATTGTTCAGAGCTGTTATTGGGATTCTGGGCGTCCATTTGATTTAAGACGAGAGTCTGATGCAATTCCTCCAGACGTGACTC TACAATCTATTATTTTTGAGAGTCCTGACAAGAATAGATGGGCCAGGTGTCTAAGCGAACTTGTTAAATATGCTGCTGAGCTTTGCCCAACCTCTGTTCA GGAAGCAAAGGTGGAAGTAGTTCAACGCCTTGCACATATAACACCCATTGATTTAGGCGGCAAGGCTCATCAGTCACAAGATGGGGACAGCAAACTTGAT CAGTGGCTCATGTATGCGATGTTTGCATGCTCTTGTCCACCAGATAGTAAAGAAACTGGCGGCTTTCAAGCAGTGAAAGATCTCTACCATCTTATATGCC CGTCGTTGAGATCTGGTTCTGACGCGAACATACATGCAGCAACAATGGCTCTTGGCCGGTCACATTTGGAAGCTTGTGAAATCATGTTTAGTGAGCTGTC ATCTTTCGTTGATGAAGTTTCTCTGGAGACTGAGACAAAACCTAAGTGGAAGAGTCAAAAATCACGCAGGGAAGAGCTGCGTGTGCATATAGCCAATACT TACCGCACTGTTGCAGAAAATATATGGCCCGGGATGCTTAATCGTAAACCGGTCTTCCGTCTTCATTATCTGAGGTTCATTGATGACACAACCAGACAGA TCTTAACATCGCCAACTGAGAACTTTCAGGAAATGCAGCCGCTTCGGTATGCTCTTGCATCTGTTATAAGATTTCTTGCACCTGAATTTGTAGACTCGAA ATCGGAGAAATTTGACCTTAGAACTAGAAAGCGGCTATTTGACCTTCTTCTGTCTTGGAGTGATGACTACACTGGTAGTACTTGGGTGCAAGATGGTGCT AGTGATTACCGTCGTGAAGTTGAGCGGTATAAAGCTTCCCAGCACTACAGGTCAAAAGACTCTGTAGACAAAATCTCATTTGATAAAGATCTGAGTGACC AGATTGAGGAAATCCAGTGGGCATCCATGAATGCTATGGCTTCACTCTTGTATGGGCCTTGTTTTGATGACAATGCAAGGAAAATGAGTGGTCGGGTAAT ATCTTGGATCAACAGTTTGTTTAATGATCCTGCGCCTCGGGCTCCATTTGGTTACTCTCCAACTCCGTCTCACTGCAAATACACGGGTGAAGGTACGCGT GGAGTTGCTGGCCGTGATAGGCATAGGGGTAGCCATCATCGTGTTGCTTTGGCAAAATTGGCTTTGAAGAATCTTCTCCTTACAAACTTGGACCTTTTCC CAGCTTGCATTGACCAGTGCTATTACTCTGATGCTGCTATTGCCGATGGCTACTTCAGTGTGCTAGCTGAGGTTTACATGCGTGAAGAGATACCAAAATG TGAAATACAGCGGCTGTTGAGCCTGATTCTTTACAAGGTTGTGGACCCAAATAGGCAGATCCGTGATGATGCCCTTCAGATGCTGGAGACACTTTCTGTG CGTGAGTGGGCTGAAGATGGGATTGAGGGTTCTTCTGGGGGTTATCGAGCTGCTGTTGTGGGCAATCTCCCTGATTCGTATCAGCAATTCCAGTACAAAC TCTCCTGTAAACTTGCGAAAGACCACCCAGAGTTGAGCCAGCTTCTGTGTGAGGAGATAATGCAGAGGCAACTTGATGCTGTTGATATTATTGCACAGCA CCAGGTTTTGACATGCATGGCCCCATGGATTGAAAACCTTAATTTCTGGAAACTCAAGGACTCTGGTTGGAGTGAAAGGCTTCTAAAGAGTCTTTATTAC GTCACATGGAGGCACGGCGATCAGTTTCCAGATGAAATTGAGAAACTCTGGAGCACGATTGCCAGCAAAGCCAGGAACATCAGTCCAGTTTTAGATTTCT TGATCACAAAAGGGATCGAGGATTGCGATTCTAATGCATCTGCAGAGATAAGCGGTGCATTTGCCACATATTTTTCAGTTGCAAAGAGGGTGAGTTTGTA CTTAGCTCGGATCTGTCCACAGCGTACAATTGATCACTTGGTATACCAACTGGCTCAGCGTATGTCCGAAGACAGCATAGAACATGTTGGCCCAAGTGTA ACCAAAGGTGATCCAAATGGAAGTTTTGTCTTGGAATTCTCCCAGGGGCCTGGTGCCGCACAAGTTGCTACCGCCGTGGATGTCCAGCCTCACATGTCAC CATTACTTGTCCGTGGTTCCCTTGATGGTCCCCTGAGAAATTCTAGCGGGAGCCTGAGCTGGCGAACCGCTGGTGCAACAGGGCGAAGCGTCTCTGGTCC CCTCAGTCCAATGCCTCCAGAGCTCAATGTAGTCCCAGTGACAGCTGGCCGGTCAGGGCAGCTTCTTCCAGCTTTAGTCAACATGTCAGGTCCTTTAATG GGAGTTAGAAGTTCAACAGGAAGTTTGCGGAGTCGGAGTCGGCATGTATCTCGAGACAGTGGGGATTACCTCATCGACACTCCAAATTCCGGGGAAGATG GGTTGCTTCCTGTTGCCGGTATGCACGGTGTTAACGCTAAAGAACTTCAGTCAGCCTTACAAGGGCATCAACAACATTCACTTACTCATGCAGATATAGC CCTGATTCTCCTAGCTGAAATAGCATACGAGAATGATGAAGATTTCCGTGAGCACTTGCCTCTGCTTTTCCACGTCACTTTTGTTTCAATGGATAGTTCG GAGGATATTGTGCTGGAACACTGTCAGCATTTGCTCGTTAATTTGCTCTACTCGCTAGCTGGTAGACACTTGGAGCTGTACGAAGTGGAAAACTGCGACG GGGAGAACAAGCAGCAGGTTGTCAGTCTGATCAAGTATGTACAATCGAAGCGGGGAAGCATGATGTGGGAAAACGAGGATCCTTCAGTTGTTCGACCTGT TCTTCCGAGTGCAGCACTTCTCTCAGCGCTTGTTCAAAGCATGGTTGATGCTATCTTCTTTCAAGGAGATCTCCGCGAGACTTGGGGTGCAGAGGCTCTC AAGTGGGCTATGGAGTGCACATCAAGGCACTTGGCTTGCCGCTCCCACCAAATCTACCGTGCACTCCGTCCCAGTGTAACTAGCGATACTTGCGTCTCAC TCCTCAGATGTCTTCACAGATGTCTCATAAACCCGGTTCCCCCAGTATTAGGGTTTATAATGGAAATCTTATTGACATTGCAAGTAATGGTGGAGAATAT GGAGCCAGAGAAAGTAATCCTCTACCCTCAGCTTTTCTGGGGCTGTGTAGCGATGATGCACACAGATTTCATCCATGTATACTGCCAGGTGCTCGAGCTC TTCTCACGAGTTATTGACAGATTATCGTTCCGGGATCGAACTACCGAAAACGTCCTCCTTTCAAGTATGCCTCGCGAAGAGCTAGATACCGATGCCGACA TCGGTGATTTCCAACGAATGGAATCACTGGCATCATCTGCTGGAAATCTGCCAACATTCGAAGGAGTTCAGCCTCTCGTCCTCAAAGGTCTATTATCGAC TGTTAGCCACGATATCTCTATCGAAGTGCTGTCGAGAATAACAGTACACTCCTGCGATTCTATATTCGGAGACGGCGAAACGAGGCTTCTTATGCACGTC ACCGGATTGCTTCCTTGGCTATGCTTGCAGTTCAACAAAGACGTAGCAGCTCTGCTCCAACAACCATCGCAAAAGGCATGTTCCGTGGCGAACAACATTG CGGTATGGTGCCGTGTGAAATCGCAAGAGGAATTGGCGACCGTATTCGTGGCCTACGCGCGGGGAGAGGTCAGGAGCATCGAGAATCTGCTCGCCTGTGT CTCGCCGTTGTTATGTGCGGAGTGGTTCCCAAAGCACTCGACAATGGCGTTCGGGCACTTGCTCCGGCTATTAGAGAGAGGGCCGGCGGAATACCAACGA GTTATACTGCTTATGCTCAAGGCATTGCTCCAACACACTCCCATGGACGCTTCCCAAAGTCCACACATGTATGCGATTGTGTCGCAGTTAGTAGAGAGCA CCCTCTGCTGGGAGGCCCTGAGCGTGTTGGAAGCTCTTCTACAGAGCTGCAGTTCCTTGCCAGGTGGGTCCCATCCGCACGACAGTGGATCTTCTTCTTC GTCGCTACACGAGAATGGTGGGGTTGATGATAACAAGGTATCAGGAACGCCTCAAACGTCGTTTAAAGGTAGGAGTGGGCCTTTGCAGTATGGAATGGGG TCGGGATTGTTTGGGGCAGGAATTTCGGCGTTTGGGAGTCAAGGCGGTGGAGGAACGGAGACGGGGATTCCGGCGAGGGCCGTTGCTCTGGAGAATACAC GAGTGATACTTGGGAGAGTGCTGGACAATTGTGCGCTAGGGAGGAGAAGGGATTATAAACGGCTGGTCCCTTTTGTAAACAACATCGGCTCTTGA
AA sequence Show only first row Show all	>Lus10035141 pacid=23162487 polypeptide=Lus10035141 locus=Lus10035141.g ID=Lus10035141.BGIv1.0 annot-version=v1.0 MKVGYPLVTLLLCLGDPQIFYSNLSPHMEQIYKILGKDKNHRFVALDCLHRVMRFYLNVHAASQPPNRIWDYLDSVTSHLLTNIRKGTFTQDVQHDKIVE FCVTIAEHNLDFAMNHMILELVKQDSPSDAKVIGLRALLDIVMSPSSPYVGLEIFKGHDIGHYIPKVKAAIESILRSCHRVYGQALLTSSKTSIDAVTKE KSQGYLFRSVLKCIPYLIEEVGRSDKITEIIPQHGISIDPGVREEAVQVLNRIVRYLPHRRFAVMRGMANFILRLPDEFPLLIQTSLGRLLDLMRFWRAC LVDDRLDNSADERKRVPQRNEGFKKSSFHHSDVIEFRASDIDAVGLIFLSSVDSQIRHTALELLRCVRALWNDIRDLTVYVQLEQNLRCEAEPIFIIDVL EEHGDDIVQSCYWDSGRPFDLRRESDAIPPDVTLQSIIFESPDKNRWARCLSELVKYAAELCPTSVQEAKVEVVQRLAHITPIDLGGKAHQSQDGDSKLD QWLMYAMFACSCPPDSKETGGFQAVKDLYHLICPSLRSGSDANIHAATMALGRSHLEACEIMFSELSSFVDEVSLETETKPKWKSQKSRREELRVHIANT YRTVAENIWPGMLNRKPVFRLHYLRFIDDTTRQILTSPTENFQEMQPLRYALASVIRFLAPEFVDSKSEKFDLRTRKRLFDLLLSWSDDYTGSTWVQDGA SDYRREVERYKASQHYRSKDSVDKISFDKDLSDQIEEIQWASMNAMASLLYGPCFDDNARKMSGRVISWINSLFNDPAPRAPFGYSPTPSHCKYTGEGTR GVAGRDRHRGSHHRVALAKLALKNLLLTNLDLFPACIDQCYYSDAAIADGYFSVLAEVYMREEIPKCEIQRLLSLILYKVVDPNRQIRDDALQMLETLSV REWAEDGIEGSSGGYRAAVVGNLPDSYQQFQYKLSCKLAKDHPELSQLLCEEIMQRQLDAVDIIAQHQVLTCMAPWIENLNFWKLKDSGWSERLLKSLYY VTWRHGDQFPDEIEKLWSTIASKARNISPVLDFLITKGIEDCDSNASAEISGAFATYFSVAKRVSLYLARICPQRTIDHLVYQLAQRMSEDSIEHVGPSV TKGDPNGSFVLEFSQGPGAAQVATAVDVQPHMSPLLVRGSLDGPLRNSSGSLSWRTAGATGRSVSGPLSPMPPELNVVPVTAGRSGQLLPALVNMSGPLM GVRSSTGSLRSRSRHVSRDSGDYLIDTPNSGEDGLLPVAGMHGVNAKELQSALQGHQQHSLTHADIALILLAEIAYENDEDFREHLPLLFHVTFVSMDSS EDIVLEHCQHLLVNLLYSLAGRHLELYEVENCDGENKQQVVSLIKYVQSKRGSMMWENEDPSVVRPVLPSAALLSALVQSMVDAIFFQGDLRETWGAEAL KWAMECTSRHLACRSHQIYRALRPSVTSDTCVSLLRCLHRCLINPVPPVLGFIMEILLTLQVMVENMEPEKVILYPQLFWGCVAMMHTDFIHVYCQVLEL FSRVIDRLSFRDRTTENVLLSSMPREELDTDADIGDFQRMESLASSAGNLPTFEGVQPLVLKGLLSTVSHDISIEVLSRITVHSCDSIFGDGETRLLMHV TGLLPWLCLQFNKDVAALLQQPSQKACSVANNIAVWCRVKSQEELATVFVAYARGEVRSIENLLACVSPLLCAEWFPKHSTMAFGHLLRLLERGPAEYQR VILLMLKALLQHTPMDASQSPHMYAIVSQLVESTLCWEALSVLEALLQSCSSLPGGSHPHDSGSSSSSLHENGGVDDNKVSGTPQTSFKGRSGPLQYGMG SGLFGAGISAFGSQGGGGTETGIPARAVALENTRVILGRVLDNCALGRRRDYKRLVPFVNNIGS

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G15680			ARM repeat superfamily protein...		Lus10035141 [exp]	0	1
AT3G05090		LRS1	LATERAL ROOT STIMULATOR 1, Tra...		Lus10001717 [exp]	4.8	0.8991
AT2G20190		ATCLASP	CLIP-associated protein (.1)		Lus10022839 [exp]	6.0	0.8899
AT5G15400			U-box domain-containing protei...		Lus10030697 [exp]	6.3	0.8832
AT2G46560			transducin family protein / WD...		Lus10005974 [exp]	7.7	0.8745
AT1G54490		ATXRN4, XRN4, E...	ETHYLENE INSENSITIVE 5, ACC IN...		Lus10000941 [exp]	8.0	0.8666
AT4G24100			Protein kinase superfamily pro...		Lus10000878 [exp]	8.1	0.8791
AT1G58230			binding (.1)		Lus10042866 [exp]	8.3	0.8855
AT1G26830		CUL3A, ATCUL3A,...	cullin 3A, cullin 3 (.1)		Lus10030485 [exp]	8.8	0.8272
AT2G20190		ATCLASP	CLIP-associated protein (.1)		Lus10011907 [exp]	9.2	0.8708
AT4G24100			Protein kinase superfamily pro...		Lus10033230 [exp]	10.8	0.8703

Compare expression of checked genes

Lus10035141 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.