Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G01270 261 / 1e-84 ATQSOX2 quiescin-sulfhydryl oxidase 2 (.1) AT1G15020 239 / 4e-76 QSO2, ATQSOX1 quiescin-sulfhydryl oxidase 1 (.1.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10034639 [exp] 409 / 3e-141 AT1G15020 662 / 0.0 quiescin-sulfhydryl oxidase 1 (.1.2)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.008G127300 [exp] 316 / 2e-105 AT1G15020 695 / 0.0 quiescin-sulfhydryl oxidase 1 (.1.2) Potri.010G115700 [exp] 314 / 7e-105 AT2G01270 660 / 0.0 quiescin-sulfhydryl oxidase 2 (.1)
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10035269 pacid=23162574 polypeptide=Lus10035269 locus=Lus10035269.g ID=Lus10035269.BGIv1.0 annot-version=v1.0 ATGTCTCAAACATTTCTGATCCTCGTCTTCAGCTCCCTTCTTTTGCTCCTCCACCTCACTCCTACTGCGTCGTCCTCCTCCGGATCTCGCTCCCTTCTTC GATCTATATCCGGCGACAAGCCTGCAGGAGCCGATATCGCCGTCGATTTGAACGCCACCAGCTTCAATGCGATTCTCCGAGACACGCCCGCTACTCACGC CATCGTTGAATTCTTTGCTAGCTGGTTTGTCTCTCCTTTTTTTTTTATCCAACCGCAATATGAAAAGGTGGCGAGGCTGTTTAATGGTCCTGATGCAGTT CATCCTGGCATTCTGTTGATGGCAAGGGTTGATTGTGCATCAAAGCCTACACAAGAGAAAAGTGAAATTCATGCAATCGAGGTCGAGGACGCACGGACGG CTGACCGATTGATTGCTTGGATAAACAAGCAACTTGGGAGCTCATATGGCTTGGATGACGAGAAATTTGAAAATGAGCACCTTTCATCAAATATTTCGGA TATTCAACAGATCGCACGGGCTGTCTATGATGTTGAGGAAGCAACATCAACTGCATTTGAAATCATATTCAGTCACAAGATGATCAAAGCTGAAACTAGG GCTTCATTTATTAAATTCCTTCAGATTTTAGTTGCCCACCATCCGTCCAAGAGGTGTCGGAAGGGTAGCGCCGAAGTACTTGTGAACTTCGATGACTTGT GTCCTCCAGATACTTTGTTGGCTAATGGACAGGAGGTCGTTGATACTAGCAAGGCTGTGCTGGGAAATTTTCGCATTTGTGGAAAAGATATTCCTCGAGG ATATTGGGTATGA
AA sequence Show only first row Show all	>Lus10035269 pacid=23162574 polypeptide=Lus10035269 locus=Lus10035269.g ID=Lus10035269.BGIv1.0 annot-version=v1.0 MSQTFLILVFSSLLLLLHLTPTASSSSGSRSLLRSISGDKPAGADIAVDLNATSFNAILRDTPATHAIVEFFASWFVSPFFFIQPQYEKVARLFNGPDAV HPGILLMARVDCASKPTQEKSEIHAIEVEDARTADRLIAWINKQLGSSYGLDDEKFENEHLSSNISDIQQIARAVYDVEEATSTAFEIIFSHKMIKAETR ASFIKFLQILVAHHPSKRCRKGSAEVLVNFDDLCPPDTLLANGQEVVDTSKAVLGNFRICGKDIPRGYWV

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G01270		ATQSOX2	quiescin-sulfhydryl oxidase 2 ...		Lus10035269 [exp]	0	1
AT3G43220			Phosphoinositide phosphatase f...		Lus10039913 [exp]	1.7	0.8975
AT4G02350		SEC15B	exocyst complex component sec1...		Lus10010295 [exp]	1.7	0.8866
AT3G03050		RHD7, ATCSLD3, ...	ROOT HAIR DEFECTIVE 7, KOJAK, ...		Lus10009247 [exp]	7.7	0.8619
AT5G22780			Adaptor protein complex AP-2, ...		Lus10005371 [exp]	9.4	0.8909
AT4G31480			Coatomer, beta subunit (.1.2)		Lus10031570 [exp]	14.4	0.8769
AT5G41950			Tetratricopeptide repeat (TPR)...		Lus10001675 [exp]	17.6	0.8735
AT4G24840			unknown protein		Lus10009908 [exp]	18.3	0.8598
AT5G53480			ARM repeat superfamily protein...		Lus10008864 [exp]	18.7	0.8588
AT2G21390			Coatomer, alpha subunit (.1)		Lus10025780 [exp]	18.8	0.8655
AT1G67930			Golgi transport complex protei...		Lus10020753 [exp]	21.9	0.8576

Compare expression of checked genes

Lus10035269 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.