Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	No hit found
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10021406 [exp] 52 / 4e-08 ND /
Poplar homologues Show only best Show top 10	No hit found
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10035552 pacid=23147541 polypeptide=Lus10035552 locus=Lus10035552.g ID=Lus10035552.BGIv1.0 annot-version=v1.0 ATGAGAAGCGGAATCTCCATCTTGTCGCCCGGCGTACTGCTCACCGTCATAACCGCCGTTGCCGTCGCTTCCCTCTTTTCAGCTCCTCCGGTGACTGCAA CCCGACTACTGGTAGACGATGCGGCGGCATTCGTAAATCGGACGGTCAACCATCATTCCCGTAAGGAAAGAAGTCAATCAACTCACTTGGGATCGGCACA AAATTCCGACAATGACTCATCCCCTGCCGCCGACGACAACAAGTCCACTTTAAGTGGAACTAGTGCTCCTCCTCCTGCCCCTACGACGCCGTTCGACGAT TCATCCGCCGCTTCCGACGACAACAACAACAAGTCTACTTTGAGTAAACGTAGTGCTCCTCCATCTCCTCCTACCTCTACGACATCGTTCAACGATTCAT CCTCTTCGGATACGACAACTACAGCTGGACCTGGACGGGCGGCTCCGTCAGGTGGTCCCGGAGAAGACACCACAGAAAAAGAAAGGGCGGGTCTAAAAGT AAACGGGGTTCCCTTACCGGCGGCCAGAATATATGCATCTGCTTCAAACACCATCGCCGATGGCCTTGATACTTAA
AA sequence Show only first row Show all	>Lus10035552 pacid=23147541 polypeptide=Lus10035552 locus=Lus10035552.g ID=Lus10035552.BGIv1.0 annot-version=v1.0 MRSGISILSPGVLLTVITAVAVASLFSAPPVTATRLLVDDAAAFVNRTVNHHSRKERSQSTHLGSAQNSDNDSSPAADDNKSTLSGTSAPPPAPTTPFDD SSAASDDNNNKSTLSKRSAPPSPPTSTTSFNDSSSSDTTTTAGPGRAAPSGGPGEDTTEKERAGLKVNGVPLPAARIYASASNTIADGLDT

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
					Lus10035552 [exp]	0	1
AT2G15480		UGT73B5	UDP-glucosyl transferase 73B5 ...		Lus10014082 [exp]	6.5	0.9096
AT5G40780		LHT1, LTH1	lysine histidine transporter 1...		Lus10022329 [exp]	8.4	0.9069
AT1G70250			receptor serine/threonine kina...		Lus10025555 [exp]	13.4	0.9028
AT3G22600			Bifunctional inhibitor/lipid-t...		Lus10039348 [exp]	15.5	0.9063
AT4G27290			S-locus lectin protein kinase ...		Lus10014811 [exp]	21.0	0.9041
AT1G22380		ATUGT85A3	UDP-glucosyl transferase 85A3 ...		Lus10025741 [exp]	23.7	0.8933
AT2G16430		ATPAP10, PAP10	purple acid phosphatase 10 (.1...		Lus10017485 [exp]	25.7	0.8930
AT2G21620		RD2	Adenine nucleotide alpha hydro...		Lus10042316 [exp]	28.3	0.8998
AT5G60600		HDS, ISPG, CSB3...	CONSTITUTIVE SUBTILISIN 3, CHL...		Lus10021480 [exp]	31.4	0.9040
AT2G47730		GST6, ATGSTF5, ...	Arabidopsis thaliana glutathio...		Lus10037121 [exp]	32.6	0.8740

Compare expression of checked genes

Lus10035552 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.