Lus10035750 [FLAX]


External link
JGI Phytozome v13
Symbol
Arabidopsis homologues
Locus ID BLAST score/e-value TF class Alias TAIR10 short description
AT1G51640 176 / 1e-50 ATEXO70G2 exocyst subunit exo70 family protein G2 (.1)
AT4G31540 174 / 6e-50 ATEXO70G1 exocyst subunit exo70 family protein G1 (.1)
AT5G03540 108 / 1e-26 ATEXO70A1 exocyst subunit exo70 family protein A1 (.1.2.3)
AT5G52340 103 / 8e-25 ATEXO70A2 exocyst subunit exo70 family protein A2 (.1)
AT5G50380 96 / 4e-22 ATEXO70F1 exocyst subunit exo70 family protein F1 (.1)
AT5G13990 93 / 4e-21 ATEXO70C2 exocyst subunit exo70 family protein C2 (.1)
AT5G13150 90 / 4e-20 ATEXO70C1 exocyst subunit exo70 family protein C1 (.1)
AT5G52350 90 / 4e-20 ATEXO70A3 exocyst subunit exo70 family protein A3 (.1)
AT3G14090 89 / 6e-20 ATEXO70D3 exocyst subunit exo70 family protein D3 (.1)
AT1G72470 88 / 2e-19 ATEXO70D1 exocyst subunit exo70 family protein D1 (.1)
Paralogs
Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description
Lus10037329 398 / 1e-135 AT4G31540 627 / 0.0 exocyst subunit exo70 family protein G1 (.1)
Lus10026230 182 / 1e-52 AT4G31540 1045 / 0.0 exocyst subunit exo70 family protein G1 (.1)
Lus10042439 179 / 1e-51 AT4G31540 1034 / 0.0 exocyst subunit exo70 family protein G1 (.1)
Lus10021283 113 / 5e-28 AT5G52340 995 / 0.0 exocyst subunit exo70 family protein A2 (.1)
Lus10043432 98 / 8e-23 AT5G03540 1004 / 0.0 exocyst subunit exo70 family protein A1 (.1.2.3)
Lus10022459 98 / 9e-23 AT5G50380 749 / 0.0 exocyst subunit exo70 family protein F1 (.1)
Lus10016764 94 / 2e-21 AT5G50380 807 / 0.0 exocyst subunit exo70 family protein F1 (.1)
Lus10040872 94 / 3e-21 AT5G59730 533 / 0.0 exocyst subunit exo70 family protein H7 (.1.2)
Lus10004917 92 / 1e-20 AT5G59730 532 / 0.0 exocyst subunit exo70 family protein H7 (.1.2)
Poplar homologues
Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description
Potri.010G250500 249 / 7e-78 AT4G31540 731 / 0.0 exocyst subunit exo70 family protein G1 (.1)
Potri.008G008700 229 / 3e-70 AT4G31540 716 / 0.0 exocyst subunit exo70 family protein G1 (.1)
Potri.006G272900 186 / 4e-54 AT4G31540 1010 / 0.0 exocyst subunit exo70 family protein G1 (.1)
Potri.018G008400 185 / 7e-54 AT4G31540 971 / 0.0 exocyst subunit exo70 family protein G1 (.1)
Potri.008G017800 106 / 1e-25 AT5G03540 960 / 0.0 exocyst subunit exo70 family protein A1 (.1.2.3)
Potri.010G241800 105 / 2e-25 AT5G03540 988 / 0.0 exocyst subunit exo70 family protein A1 (.1.2.3)
Potri.015G094800 101 / 5e-24 AT5G50380 785 / 0.0 exocyst subunit exo70 family protein F1 (.1)
Potri.016G071000 96 / 3e-22 AT5G52340 1021 / 0.0 exocyst subunit exo70 family protein A2 (.1)
Potri.006G203900 95 / 8e-22 AT5G52340 988 / 0.0 exocyst subunit exo70 family protein A2 (.1)
Potri.012G097100 95 / 1e-21 AT5G50380 754 / 0.0 exocyst subunit exo70 family protein F1 (.1)
PFAM info
Clan ID Clan name Pfam ID Pfam name Pfam description
CL0295 Vps51 PF03081 Exo70 Exo70 exocyst complex subunit
Representative CDS sequence
>Lus10035750 pacid=23147495 polypeptide=Lus10035750 locus=Lus10035750.g ID=Lus10035750.BGIv1.0 annot-version=v1.0
ATGTTGGTAGACATTGAAGGAGATGCAGAGGGAGTGGCGATGCAAATTCGAGCGAGACGTATCAGGTTGGCAGCTGGAGGTTCTATTGTTGGAGAGATCT
GTCAGTTGCTCTCGTCCTTGCAAGGGATCCGACTCCAGACTGTTCGGCAGTCAGGTAACATGGTTTCCCATTGTGTGCCTCGCGAGGCTCTTAAATATCT
CTCGGGAGTGTTGCAGGATCTTCTTGGGGCTTACAGATTTAACCTGGATTCGTGGTCAAAAGCACACGTGGATGCCCCGCTTTCTTACCTCTTCATGATG
AATAACCACTGCCATTTCAGCAGTCTCAGGGGCACAAAGCTTGGACATTTGATGGGAGATTCCTGGTTAAAGGCTCATGAAAAATACAAAGACCATTTCA
TGGCTCTTTACTTGAGGGAAAGTTGGGGAAAGGTCATCAGCCATCTTCGTCCACAGGGTCAAGCTTATTCATCTCCTGCAAAATTATCTACAAAAGGGTT
CAAAGCATTCAATCAGGTGCTTGATAACACGTACCAGAATCAGTCAAGTTGGGTTGTCCCTGACGAGAGCTTGAGGTTGAGAATCTGCAAGCTCTTGGTT
CAATCTCTAGTGCCTGTTTACAGAAGCTACTTACAGAGCTATAAACTTCTAATTGAGCAAGATCCTAGTGCCAAAAAGCACGTCAAATACACAACACAAG
GTCTGGAAACCATGCTGAGCTCTTTGTTCCAGCAGAAGATGACAAAATATAGACGCAACCGACATGCATATTGGATTAGCAAGATCAAAGACGTAATGTC
AGATCATTTCCAACCGACTCTGATGGCTGCCTGA
AA sequence
>Lus10035750 pacid=23147495 polypeptide=Lus10035750 locus=Lus10035750.g ID=Lus10035750.BGIv1.0 annot-version=v1.0
MLVDIEGDAEGVAMQIRARRIRLAAGGSIVGEICQLLSSLQGIRLQTVRQSGNMVSHCVPREALKYLSGVLQDLLGAYRFNLDSWSKAHVDAPLSYLFMM
NNHCHFSSLRGTKLGHLMGDSWLKAHEKYKDHFMALYLRESWGKVISHLRPQGQAYSSPAKLSTKGFKAFNQVLDNTYQNQSSWVVPDESLRLRICKLLV
QSLVPVYRSYLQSYKLLIEQDPSAKKHVKYTTQGLETMLSSLFQQKMTKYRRNRHAYWISKIKDVMSDHFQPTLMAA

DESeq2's median of ratios [FLAX]

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Coexpressed genes

Only top 10 genes are shown Show allDownload tab-delimited text
Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.
At best At TF class At alias At description Locus MR r Symbol HYPR_s2_CTRR_s2_FoxR_s4_CTRR_s4_FoxR_r1_CTRR_r1_FoxR_r3_CTRR_r3_FoxR_r1s2_CTRR_r1s2_FoxR_r3s2_CTRR_r3s2_FoxR_s6_CTRR_s6_Al4R_s6_Al12R_s6_Al24R_s8_CTRR_s8_Al4R_s8_Al12R_s8_Al24R_r5_CTRR_r5_Al4R_r5_Al12R_r5_Al24R_r7_CTRR_r7_Al4R_r7_Al12R_r7_Al24LEAF_NLEAF_PLEAF_NPKSAMAR_BetAR_rdfcPARTOP_BetTOP_rdfiFIBaiFIBbMID_BetMID_rdftFIBatFIB_GrtFIB_LitFIB_BitFIBbtFIBb_PUL8tFIBb_PUL24tFIBb_PUL96tFIBb_OPP8tFIBb_OPP24tFIBb_OPP96sXYLasXYLbsXYLb_PUL8sXYLb_PUL24sXYLb_PUL96sXYLb_OPP8sXYLb_OPP24sXYLb_OPP96
AT1G51640 ATEXO70G2 exocyst subunit exo70 family p... Lus10035750 0 1
AT5G12870 MYB ATMYB46 myb domain protein 46 (.1) Lus10029520 1.0 0.9383
AT4G31540 ATEXO70G1 exocyst subunit exo70 family p... Lus10037329 4.5 0.8689
AT5G12870 MYB ATMYB46 myb domain protein 46 (.1) Lus10027369 4.7 0.8879
AT2G28760 UXS6 UDP-XYL synthase 6 (.1.2.3) Lus10001707 6.2 0.9323
AT2G38080 ATLMCO4, IRX12,... LACCASE 4, IRREGULAR XYLEM 12,... Lus10032894 9.2 0.9046
AT1G73140 TBL31 Plant protein of unknown funct... Lus10042845 11.0 0.9185
AT5G19780 TUA5 tubulin alpha-5 (.1) Lus10005705 12.0 0.8576
AT3G13850 AS2 LBD22 LOB domain-containing protein ... Lus10002513 16.1 0.8134
AT2G28760 UXS6 UDP-XYL synthase 6 (.1.2.3) Lus10001705 16.7 0.9031
AT2G31110 TBL40 TRICHOME BIREFRINGENCE-LIKE 40... Lus10000466 17.0 0.9007

Lus10035750 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.