Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G13750 213 / 3e-66 ZIFL1 zinc induced facilitator-like 1 (.1.2.3) AT5G13740 215 / 1e-65 ZIF1 zinc induced facilitator 1 (.1) AT3G43790 169 / 1e-48 ZIFL2 zinc induced facilitator-like 2 (.1.2.3) AT5G13940 48 / 8e-06 aminopeptidases (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10037341 [exp] 365 / 1e-119 AT5G13750 640 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10034846 [exp] 282 / 1e-91 AT5G13750 600 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10035766 [exp] 273 / 1e-87 AT5G13750 622 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10034847 [exp] 266 / 2e-85 AT5G13750 664 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10033392 [exp] 266 / 2e-85 AT5G13750 659 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10034794 [exp] 266 / 4e-85 AT5G13750 645 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10033338 [exp] 261 / 2e-83 AT5G13750 646 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10033391 [exp] 244 / 9e-77 AT5G13750 642 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Lus10037425 [exp] 184 / 5e-54 AT3G43790 687 / 0.0 zinc induced facilitator-like 2 (.1.2.3)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.008G010600 [exp] 271 / 2e-87 AT5G13750 630 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Potri.006G026200 [exp] 226 / 4e-70 AT5G13750 572 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Potri.016G024400 [exp] 216 / 4e-66 AT5G13750 588 / 0.0 zinc induced facilitator-like 1 (.1.2.3) Potri.010G248401 [exp] 100 / 3e-25 AT5G13750 144 / 2e-41 zinc induced facilitator-like 1 (.1.2.3)
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10035765 pacid=23147339 polypeptide=Lus10035765 locus=Lus10035765.g ID=Lus10035765.BGIv1.0 annot-version=v1.0 ATGAAGTATAACCATCTCATTGTACTTGATGCAGCCAGCAGAAAAATATCCAAAGTTATTTTCCAAGCACTCTGTGTTTGGAAGGAAACATTGCATGTCC ACAAAGACGAGAGGACTTCCACAACAGACTCTGGTGATGCTGTGGAAACTGTATCTGGTGGTGACGAGTCAAAGGGAGACGTGGAAGGATCAGTTACCGA AGCGAAGCAACCAGCTGCTAAACAAAGCCTACTGAAAAATTGGCCTCTGATGTCATCTATCATTGTGTATTGTGTCTTCTCACTTCATGATATGGCTTAC TCCGAGTCTGCAGTTATTCCTCCTGCTGTTCTGGATCTTATTTCTGAGATAAGGATTGAAAACATACGAATCGTACTCCTTTTTGTAGATATTTTCACTA TGGGCTGTCAGTCCCCGGAAGTTGGGTGGACTGGGATATTCAACATCGGATGTTGGTTTAGTTCTATCAATCTCGGGTACCTCATTCTACCATTTACTCA ATATTTACTTCGTGCGAGCTCACTTATTGACACACTGTTTAAACGAGTAGGTCTTGCGCTACTTCTGGTCCAATTGTTTCTGTATCCATACATAGACAGG CTTCTTGGACCTGTAAGGGTGTCCCGCCTTGCTGGGGCTTTGTCCATCCCATTATTGGCAAGTTACCCTTTCCTTGCGAAGCTTGATGGTATCACTCTGA GCCTGCTGTTGAACTGTGCATCTATATTGAAGAATCTTCTAGCTGTGTCCATTGCCACTGGCTTGTCTATTCTACAAAATAAAGCTGTGGATCAGAACCA GAGAGGAGCTGCTAACGGCATTGCTATGACAGGAATGTCCCTCTTTAAAGCGTTTGGTCCTGCTGGAGGAGGTGCTCTATTTTCTTGGGGAGAATCACGC CTACATGCTGCCTTCCTTCCAGGGAGCCAGATGGTTTTTGCAATGCTAATCGTGGTGGAAGCAATTGGGGTGGTGTTGACGTTCAAGCCTTTCTTAGTCC AACGCCGTACGTGA
AA sequence Show only first row Show all	>Lus10035765 pacid=23147339 polypeptide=Lus10035765 locus=Lus10035765.g ID=Lus10035765.BGIv1.0 annot-version=v1.0 MKYNHLIVLDAASRKISKVIFQALCVWKETLHVHKDERTSTTDSGDAVETVSGGDESKGDVEGSVTEAKQPAAKQSLLKNWPLMSSIIVYCVFSLHDMAY SESAVIPPAVLDLISEIRIENIRIVLLFVDIFTMGCQSPEVGWTGIFNIGCWFSSINLGYLILPFTQYLLRASSLIDTLFKRVGLALLLVQLFLYPYIDR LLGPVRVSRLAGALSIPLLASYPFLAKLDGITLSLLLNCASILKNLLAVSIATGLSILQNKAVDQNQRGAANGIAMTGMSLFKAFGPAGGGALFSWGESR LHAAFLPGSQMVFAMLIVVEAIGVVLTFKPFLVQRRT

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G13740		ZIF1	zinc induced facilitator 1 (.1...		Lus10035765 [exp]	0	1
AT1G17710		AtPEPC1	Arabidopsis thaliana phosphoet...		Lus10015632 [exp]	2.2	0.8240
AT2G16050			Cysteine/Histidine-rich C1 dom...		Lus10017477 [exp]	7.5	0.7897
AT3G01470	HD	HD-ZIP-1, HAT5,...	HOMEODOMAIN PROTEIN FROM ARABI...		Lus10008795 [exp]	10.4	0.7808
AT4G21120		CAT1, AAT1	CATIONIC AMINO ACID TRANSPORTE...		Lus10001581 [exp]	11.5	0.7712
AT5G64440		ATFAAH	fatty acid amide hydrolase (.1...		Lus10007095 [exp]	14.3	0.7343
AT1G17710		AtPEPC1	Arabidopsis thaliana phosphoet...		Lus10037650 [exp]	21.4	0.7752
AT1G55200			Protein kinase protein with ad...		Lus10040097 [exp]	23.5	0.7715
AT3G22400		ATLOX5, LOX5	Arabidopsis thaliana lipoxygen...		Lus10004915 [exp]	23.7	0.7264
AT4G10960		UGE5	UDP-D-glucose/UDP-D-galactose ...		Lus10001822 [exp]	27.1	0.7746
AT3G02570		PMI1, MEE31	PHOSPHOMANNOSE ISOMERASE 1, MA...		Lus10017603 [exp]	28.0	0.7111

Compare expression of checked genes

Lus10035765 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.