Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G11460 97 / 2e-23 Protein of unknown function (DUF581) (.1) AT1G79970 61 / 4e-11 unknown protein AT2G25690 56 / 1e-08 Protein of unknown function (DUF581) (.1), Protein of unknown function (DUF581) (.2) AT3G22550 51 / 2e-07 Protein of unknown function (DUF581) (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10025770 [exp] 471 / 1e-170 AT3G22550 100 / 2e-24 Protein of unknown function (DUF581) (.1) Lus10012417 [exp] 97 / 9e-23 AT3G22550 140 / 4e-38 Protein of unknown function (DUF581) (.1) Lus10010568 [exp] 73 / 6e-15 AT3G22550 187 / 2e-58 Protein of unknown function (DUF581) (.1) Lus10006102 [exp] 64 / 8e-12 AT3G22550 193 / 1e-60 Protein of unknown function (DUF581) (.1) Lus10042606 [exp] 49 / 9e-07 AT3G22550 139 / 1e-39 Protein of unknown function (DUF581) (.1) Lus10022060 [exp] 49 / 1e-06 AT3G63210 133 / 1e-37 MEDIATOR OF ABA-REGULATED DORMANCY 1, Protein of unknown function (DUF581) (.1) Lus10007668 [exp] 39 / 0.0004 AT3G22550 43 / 6e-06 Protein of unknown function (DUF581) (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.001G179700 [exp] 183 / 7e-56 AT5G11460 141 / 1e-38 Protein of unknown function (DUF581) (.1) Potri.006G245200 [exp] 135 / 5e-37 AT5G11460 144 / 2e-39 Protein of unknown function (DUF581) (.1) Potri.018G035400 [exp] 98 / 2e-23 AT5G11460 144 / 1e-39 Protein of unknown function (DUF581) (.1) Potri.010G085700 [exp] 79 / 1e-16 AT3G22550 216 / 8e-69 Protein of unknown function (DUF581) (.1) Potri.008G154600 [exp] 72 / 1e-14 AT3G22550 219 / 2e-70 Protein of unknown function (DUF581) (.1) Potri.002G050800 [exp] 60 / 3e-10 AT3G22550 174 / 3e-53 Protein of unknown function (DUF581) (.1) Potri.005G211500 [exp] 59 / 5e-10 AT3G22550 182 / 4e-56 Protein of unknown function (DUF581) (.1)
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10035894 pacid=23141104 polypeptide=Lus10035894 locus=Lus10035894.g ID=Lus10035894.BGIv1.0 annot-version=v1.0 ATGGATGAATATGCGTCAGGGCCTCATTTCCAATCTAATGTATTAAGCCTCACAACAAGCAGCTCCTTCTCCAAGCTTCGTGGTTTCTTTACAAGATCTA GTTCTAAAGGCTCAACTGAATTTGAGTCAGTTAGAAGCCCGACATCTCCTCTAGATCTCATTTTCCCCTCAAATCATAGCAACCCGTTTAACCGTAAGTC GCCAAGGACATCTGAGAGTGGCCATAAGAAACAATGGGATAGCTGCAAAGTAGGTCTTGGCCTTGTCAAGTTGCTTTTTGAGGAAACACAGCAAAGTGGT GAGCTTCTGAAATCCCCAAAGAGGAAGAATGTGATATTTGGATCACAGATGAAGATTGGTGACTCTAAGAGATCAATTTCTTTACCGAAAAACTACATGA TCTCGCTTCCATCTCAATCTGGAAGTCCCAAGGGTCTGTTACGTAAATCAATTTCTGTCTCTGGCGCAGAGGAAGAAGACCTTATGCCGCTGGAAGATTC TTCTCTAAGTAGCTTGACCAGAATACCGAGCTTCGGTTCGAAAGCATGTTTGCCAGCATATATGTCTACTTCTACATCAAGTTTGCCTGTTGCTGTGAGC AGAAGTTTGAAGAAGCACCATTCCGTAGACAATAAGCCAACATCTGTGCCTATACCGATTCTTCCTAGCCAACGAGAGATTGAGCTCTCTGAAGATTATA CTTGCATAATCTCCTATGGTCCCAGTCCTAAAACAACTCATATTTTTGGCGACTGCATTTTAGAACCCTCGCTAGTGAGTTGA
AA sequence Show only first row Show all	>Lus10035894 pacid=23141104 polypeptide=Lus10035894 locus=Lus10035894.g ID=Lus10035894.BGIv1.0 annot-version=v1.0 MDEYASGPHFQSNVLSLTTSSSFSKLRGFFTRSSSKGSTEFESVRSPTSPLDLIFPSNHSNPFNRKSPRTSESGHKKQWDSCKVGLGLVKLLFEETQQSG ELLKSPKRKNVIFGSQMKIGDSKRSISLPKNYMISLPSQSGSPKGLLRKSISVSGAEEEDLMPLEDSSLSSLTRIPSFGSKACLPAYMSTSTSSLPVAVS RSLKKHHSVDNKPTSVPIPILPSQREIELSEDYTCIISYGPSPKTTHIFGDCILEPSLVS

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT3G22550			Protein of unknown function (D...		Lus10035894 [exp]	0	1
AT1G73390			Endosomal targeting BRO1-like ...		Lus10042289 [exp]	1.4	0.8472
AT5G03530		ATRABALPHA, AtR...	ARABIDOPSIS THALIANA RAB GTPAS...		Lus10038671 [exp]	5.0	0.7562
AT5G38220			alpha/beta-Hydrolases superfam...		Lus10033575 [exp]	9.3	0.7403
AT1G53580		GLY3, GLX2-3, E...	GLYOXALASE 2-3, ETHE1-LIKE, gl...		Lus10020760 [exp]	10.0	0.8183
AT5G35180			Protein of unknown function (D...		Lus10019585 [exp]	10.9	0.8260
AT2G38900			Serine protease inhibitor, pot...		Lus10003225 [exp]	11.4	0.8185
AT1G50670			OTU-like cysteine protease fam...		Lus10040075 [exp]	14.5	0.8066
AT3G20870		ZTP29	zinc transporter 29, ZIP metal...		Lus10031268 [exp]	16.5	0.7922
AT3G06580		GAL1, GALK	GALACTOSE KINASE 1, Mevalonate...		Lus10037789 [exp]	20.3	0.7396
AT2G25280			unknown protein		Lus10001925 [exp]	22.0	0.8004

Compare expression of checked genes

Lus10035894 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.