Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G22360 521 / 0 ATUGT85A2, AT2 UDP-glucosyl transferase 85A2 (.1.2) AT1G22400 521 / 0 ATUGT85A1, UGT85A1 ARABIDOPSIS THALIANA UDP-GLUCOSYL TRANSFERASE 85A1, UDP-Glycosyltransferase superfamily protein (.1) AT1G22340 506 / 2e-177 ATUGT85A7 UDP-glucosyl transferase 85A7 (.1) AT1G22380 503 / 3e-176 ATUGT85A3 UDP-glucosyl transferase 85A3 (.1) AT1G22370 497 / 1e-173 ATUGT85A5 UDP-glucosyl transferase 85A5 (.1.2) AT1G78270 461 / 9e-160 ATUGT85A4 UDP-glucosyl transferase 85A4 (.1) AT5G59580 271 / 5e-86 UGT76E1 UDP-glucosyl transferase 76E1 (.1) AT3G46660 265 / 2e-83 UGT76E12 UDP-glucosyl transferase 76E12 (.1) AT5G59590 263 / 5e-83 UGT76E2 UDP-glucosyl transferase 76E2 (.1) AT3G46670 263 / 6e-83 UGT76E11 UDP-glucosyl transferase 76E11 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10025741 [exp] 714 / 0 AT1G22380 525 / 0.0 UDP-glucosyl transferase 85A3 (.1) Lus10024583 [exp] 521 / 0 AT1G22380 598 / 0.0 UDP-glucosyl transferase 85A3 (.1) Lus10032220 [exp] 520 / 0 AT1G22380 601 / 0.0 UDP-glucosyl transferase 85A3 (.1) Lus10031388 [exp] 497 / 1e-173 AT1G22400 644 / 0.0 ARABIDOPSIS THALIANA UDP-GLUCOSYL TRANSFERASE 85A1, UDP-Glycosyltransferase superfamily protein (.1) Lus10032218 [exp] 492 / 1e-171 AT1G22380 564 / 0.0 UDP-glucosyl transferase 85A3 (.1) Lus10024584 [exp] 481 / 2e-167 AT1G22400 570 / 0.0 ARABIDOPSIS THALIANA UDP-GLUCOSYL TRANSFERASE 85A1, UDP-Glycosyltransferase superfamily protein (.1) Lus10041055 [exp] 479 / 2e-166 AT1G22360 610 / 0.0 UDP-glucosyl transferase 85A2 (.1.2) Lus10013925 [exp] 468 / 2e-162 AT1G22380 560 / 0.0 UDP-glucosyl transferase 85A3 (.1) Lus10013924 [exp] 461 / 1e-159 AT1G22400 551 / 0.0 ARABIDOPSIS THALIANA UDP-GLUCOSYL TRANSFERASE 85A1, UDP-Glycosyltransferase superfamily protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.007G095000 [exp] 618 / 0 AT1G22340 543 / 0.0 UDP-glucosyl transferase 85A7 (.1) Potri.005G073766 [exp] 605 / 0 AT1G22400 562 / 0.0 ARABIDOPSIS THALIANA UDP-GLUCOSYL TRANSFERASE 85A1, UDP-Glycosyltransferase superfamily protein (.1) Potri.005G073800 [exp] 605 / 0 AT1G22400 562 / 0.0 ARABIDOPSIS THALIANA UDP-GLUCOSYL TRANSFERASE 85A1, UDP-Glycosyltransferase superfamily protein (.1) Potri.017G052166 [exp] 536 / 0 AT1G22360 607 / 0.0 UDP-glucosyl transferase 85A2 (.1.2) Potri.002G098400 [exp] 536 / 0 AT1G22360 640 / 0.0 UDP-glucosyl transferase 85A2 (.1.2) Potri.017G052300 [exp] 534 / 0 AT1G22360 603 / 0.0 UDP-glucosyl transferase 85A2 (.1.2) Potri.001G313000 [exp] 528 / 0 AT1G22360 564 / 0.0 UDP-glucosyl transferase 85A2 (.1.2) Potri.016G021000 [exp] 526 / 0 AT1G22360 561 / 0.0 UDP-glucosyl transferase 85A2 (.1.2) Potri.002G098300 [exp] 517 / 0 AT1G22360 602 / 0.0 UDP-glucosyl transferase 85A2 (.1.2) Potri.001G312600 [exp] 513 / 6e-180 AT1G22360 586 / 0.0 UDP-glucosyl transferase 85A2 (.1.2)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0113 [flax] [poplar] GT-B PF00201 [flax] [poplar] UDPGT UDP-glucoronosyl and UDP-glucosyl transferase
Representative CDS sequence Show only first row Show all	>Lus10035903 pacid=23141006 polypeptide=Lus10035903 locus=Lus10035903.g ID=Lus10035903.BGIv1.0 annot-version=v1.0 ATGAGTGAAGTAAAGCAGCATGCAGTCCTGTTGCCGCTTCCAGCTCAAGGCCATGTCAATCCCTTCATGCAACTTGCCAAACTATTACACTCAAAAGGAT TCCACATAACCTTTGTCAACACTGAGTATAACCACAGGCGCCTCATCCGAACCAGAGGCCCTGAAGCTGTGAAGGGTCTCTCCGATTTCCAGTTTCACAC AATTCCTGATGGTTTGCCTCCTTCCGACAAGGATGCCACTCAAGACCCTCTTTCTCTTTGTTACTCTATTCAACACGATTGTCTACAACCGTTTCTGGAG CTGCTTAACAAGCTAAACACATCTCCCCAAATCCCCCCTGTTTCTTGCATAGTGTCAGATGGATGCATGACTTTTGGAATTAAAGCTGCCGAGCTGTTGG GTATCACCCAAGCTACTTTCTGGACTGCCTCTGCTTGCAGCTTCATGGGTTCCTTACAATTCGAACAACTCGTTCGTAGAGGCATATCTCCTCTCAAAGA GGCCAACCTCACGGACGGAACATTAGACCTTCATTTAGACTGGATTCCAGGAATGAGCAACATCCGTCTCAAAGATCTCCCAAGTTTTGCAACGACTACG GATGCTGAAGATGTAATGTTCAAGTTCGCAGAAATTGAGATAGAAAACTGCTTGAAATCCGGTGCGATTATCTTCAACACATTTGATGCCTTGGAAGAAC AAGTGTTATCTGCTATCAAAATGGATTACTACCCTCAGCCGATCTACACAGTGGGTCCACTCCACTTACTTGGTAAGGAAATGCTCGAACCCGCGACGGA ATCCAACTCTATCAGTTCAAATCTCTGGAAAGAAGACCTGGGATGTATGGAATGGCTTGGTCAAAGAGAACCCAACTCTGTTGTTTATGTCAATTATGGA AGTGTAACTGTTATGTCTGACGAAAACCTGAAAGAGTTTGCGTGGGGGTTGGCAAACTGCGAGCGCCCATTTCTTTGGATCGTAAGAGGAGATGTTGTGA TGGGAGATTCTGGATTTTTGCCACTGGATTTTTTAGATGAGGTCAAGGACAGAGGGTTTCTGGCTAGTTGGTGCCTGCAGCAGGAAGTGCTTTCACATCC GTCTGTTGGAGTTTTCTTGACGCATTGTGGTTGGAATTCTATGATGGAGAGTCTGTCAGTCGGTGTTCCGATGATTTGCTGGCCCGTTTTTGGAGATCAG CAAACCAATTGCAGATACGCTTGCAGTGAATGGAGGGTTGGTGTGGAGCTCAGTCGTGATGTTAAGAGGAATGAGGTCACAAAAGTCATTCAGAGCGTGA TGCTTGAAGAGAACTGGAAGATGATGAAACAAAAGTCCGTGGAATGGAAAACGAGAGCAAAAGATGCTGTTAGCGAGCAAGGATCGTCGTTTAACAATTT TACCAGATTTTTTCAAGATCATCTGCAATATCAGAGTTGA
AA sequence Show only first row Show all	>Lus10035903 pacid=23141006 polypeptide=Lus10035903 locus=Lus10035903.g ID=Lus10035903.BGIv1.0 annot-version=v1.0 MSEVKQHAVLLPLPAQGHVNPFMQLAKLLHSKGFHITFVNTEYNHRRLIRTRGPEAVKGLSDFQFHTIPDGLPPSDKDATQDPLSLCYSIQHDCLQPFLE LLNKLNTSPQIPPVSCIVSDGCMTFGIKAAELLGITQATFWTASACSFMGSLQFEQLVRRGISPLKEANLTDGTLDLHLDWIPGMSNIRLKDLPSFATTT DAEDVMFKFAEIEIENCLKSGAIIFNTFDALEEQVLSAIKMDYYPQPIYTVGPLHLLGKEMLEPATESNSISSNLWKEDLGCMEWLGQREPNSVVYVNYG SVTVMSDENLKEFAWGLANCERPFLWIVRGDVVMGDSGFLPLDFLDEVKDRGFLASWCLQQEVLSHPSVGVFLTHCGWNSMMESLSVGVPMICWPVFGDQ QTNCRYACSEWRVGVELSRDVKRNEVTKVIQSVMLEENWKMMKQKSVEWKTRAKDAVSEQGSSFNNFTRFFQDHLQYQS

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G22360		ATUGT85A2, AT2	UDP-glucosyl transferase 85A2 ...		Lus10035903 [exp]	0	1
AT1G24020		MLP423	MLP-like protein 423 (.1.2)		Lus10030646 [exp]	1.4	0.9276
AT2G20870			cell wall protein precursor, p...		Lus10039801 [exp]	2.8	0.9223
AT2G21140		ATPRP2	proline-rich protein 2 (.1)		Lus10026281 [exp]	3.0	0.9214
AT3G61430		ATPIP1, PIP1;1,...	PLASMA MEMBRANE INTRINSIC PROT...		Lus10042385 [exp]	4.9	0.9014
AT3G55150		ATEXO70H1	exocyst subunit exo70 family p...		Lus10023455 [exp]	5.9	0.8980
AT3G62650			unknown protein		Lus10010026 [exp]	6.0	0.8712
					Lus10007144 [exp]	7.3	0.8789
AT1G15360	AP2_ERF	WIN1, SHN1	WAX INDUCER 1, SHINE 1, Integr...		Lus10002015 [exp]	8.1	0.8959
AT2G38110		ATGPAT6, GPAT6	glycerol-3-phosphate acyltrans...		Lus10004835 [exp]	8.8	0.8713
AT1G24020		MLP423	MLP-like protein 423 (.1.2)		Lus10030840 [exp]	8.9	0.8759

Compare expression of checked genes

Lus10035903 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.