Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	No hit found
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description
Poplar homologues Show only best Show top 10	No hit found
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10035913 pacid=23140986 polypeptide=Lus10035913 locus=Lus10035913.g ID=Lus10035913.BGIv1.0 annot-version=v1.0 ATGGGGAATTTCACTCATGATGTTCATGACGCTACGATGAAGGAGTGCAGTAAGTCTTGCGTTGTTCTGAAACTCCGTCATGAATTCGAGGTTGTTCGTT CGTCTCTTATTTCCACGAATACTTATGATTTTGATACAGTTCTCGGCGATTTAGTTCGTGTTGAAACCCATCTACGTACTCAATCTCAAATCGATGGTCT CACTGCTGGGTCGAATATTGGTTTTGATGCTCAGCGGAAATCCTCTTCTCTTGGTGATGCCGTTGGGAATTATGGATCTGCCATTGAAGAGGACAACGAA GCGAAACTCTATATGGCTCTAGCTAGCGCCTCGAATCGGTCTGGTACTGGTGGTTCGTTTGGTCCGACTCGCAACACTTCATATTCTATTGAGTCAACCG AAACATCCTTGACTGGAAATTGTGATATTAACCAACTGGTTAAGGCTGCTCTGTCTCAAGTTCCACTACACAGGCAGAATTTTGGCATTTCCAGCGCTCT TCAAGATGGATGGGCATCCCAAATTACCCTTTAG
AA sequence Show only first row Show all	>Lus10035913 pacid=23140986 polypeptide=Lus10035913 locus=Lus10035913.g ID=Lus10035913.BGIv1.0 annot-version=v1.0 MGNFTHDVHDATMKECSKSCVVLKLRHEFEVVRSSLISTNTYDFDTVLGDLVRVETHLRTQSQIDGLTAGSNIGFDAQRKSSSLGDAVGNYGSAIEEDNE AKLYMALASASNRSGTGGSFGPTRNTSYSIESTETSLTGNCDINQLVKAALSQVPLHRQNFGISSALQDGWASQITL

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
					Lus10035913 [exp]	0	1
AT1G24020		MLP423	MLP-like protein 423 (.1.2)		Lus10029185 [exp]	2.4	0.9085
					Lus10008051 [exp]	10.0	0.9144
AT3G11080		AtRLP35	receptor like protein 35 (.1)		Lus10028053 [exp]	11.1	0.8552
AT5G64530	NAC	ANAC104, XND1	Arabidopsis NAC domain contain...		Lus10010747 [exp]	15.1	0.9034
					Lus10016424 [exp]	17.1	0.8811
AT4G33495		RPD1	ROOT PRIMORDIUM DEFECTIVE 1, U...		Lus10005755 [exp]	18.5	0.9022
AT5G18170		GDH1	glutamate dehydrogenase 1 (.1)		Lus10005697 [exp]	20.6	0.9072
AT5G38760			Late embryogenesis abundant pr...		Lus10003046 [exp]	23.1	0.9017
					Lus10038430 [exp]	33.5	0.8412
					Lus10031312 [exp]	37.8	0.8879

Compare expression of checked genes

Lus10035913 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.