Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G10470 831 / 0 KAC1, KCA1 KINESIN CDKA;1 ASSOCIATED 1, kinesin like protein for actin based chloroplast movement 1 (.1.2) AT5G65460 808 / 0 KAC2, KCA2 kinesin CDKA ;1 associated 2, kinesin like protein for actin based chloroplast movement 2 (.1) AT2G22610 157 / 4e-39 Di-glucose binding protein with Kinesin motor domain (.1.2) AT5G27550 148 / 2e-36 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) AT1G72250 148 / 5e-36 Di-glucose binding protein with Kinesin motor domain (.1.2) AT1G18410 134 / 1e-31 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) AT5G27000 132 / 3e-31 KATD, ATK4 KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA D, kinesin 4 (.1) AT1G73860 131 / 8e-31 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) AT3G44730 130 / 1e-30 AtKIN14h, ATKP1 ARABIDOPSIS KINESIN-LIKE PROTEIN 1, kinesin-like protein 1 (.1) AT5G41310 124 / 1e-28 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10025721 [exp] 1196 / 0 AT5G10470 1845 / 0.0 KINESIN CDKA;1 ASSOCIATED 1, kinesin like protein for actin based chloroplast movement 1 (.1.2) Lus10035954 [exp] 165 / 3e-41 AT2G22610 1302 / 0.0 Di-glucose binding protein with Kinesin motor domain (.1.2) Lus10025708 [exp] 164 / 4e-41 AT2G22610 1238 / 0.0 Di-glucose binding protein with Kinesin motor domain (.1.2) Lus10013714 [exp] 139 / 3e-33 AT1G72250 1098 / 0.0 Di-glucose binding protein with Kinesin motor domain (.1.2) Lus10005582 [exp] 139 / 3e-33 AT1G72250 1109 / 0.0 Di-glucose binding protein with Kinesin motor domain (.1.2) Lus10029914 [exp] 131 / 5e-31 AT5G27550 905 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Lus10032897 [exp] 130 / 1e-30 AT3G44730 1302 / 0.0 ARABIDOPSIS KINESIN-LIKE PROTEIN 1, kinesin-like protein 1 (.1) Lus10032264 [exp] 127 / 1e-29 AT1G63640 991 / 0.0 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.1), P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.2) Lus10004487 [exp] 127 / 1e-29 AT5G27550 881 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.007G010700 [exp] 991 / 0 AT5G10470 1840 / 0.0 KINESIN CDKA;1 ASSOCIATED 1, kinesin like protein for actin based chloroplast movement 1 (.1.2) Potri.011G140000 [exp] 153 / 1e-37 AT1G72250 1201 / 0.0 Di-glucose binding protein with Kinesin motor domain (.1.2) Potri.002G110600 [exp] 151 / 3e-37 AT2G22610 1057 / 0.0 Di-glucose binding protein with Kinesin motor domain (.1.2) Potri.005G030271 [exp] 145 / 2e-35 AT5G27550 865 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Potri.001G436200 [exp] 145 / 4e-35 AT1G72250 1248 / 0.0 Di-glucose binding protein with Kinesin motor domain (.1.2) Potri.013G020700 [exp] 144 / 5e-35 AT5G27550 862 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Potri.001G104000 [exp] 128 / 8e-30 AT1G63640 1102 / 0.0 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.1), P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.2) Potri.001G467600 [exp] 127 / 9e-30 AT3G44730 1266 / 0.0 ARABIDOPSIS KINESIN-LIKE PROTEIN 1, kinesin-like protein 1 (.1) Potri.011G165200 [exp] 127 / 9e-30 AT3G44730 1300 / 0.0 ARABIDOPSIS KINESIN-LIKE PROTEIN 1, kinesin-like protein 1 (.1) Potri.013G011500 [exp] 124 / 1e-28 AT5G27000 1081 / 0.0 KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA D, kinesin 4 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0023 [flax] [poplar] P-loop_NTPase PF00225 [flax] [poplar] Kinesin Kinesin motor domain
Representative CDS sequence Show only first row Show all	>Lus10035940 pacid=23141068 polypeptide=Lus10035940 locus=Lus10035940.g ID=Lus10035940.BGIv1.0 annot-version=v1.0 ATGATTCTGGAAGGATCCAGCCATGATCGTGGTCTATATGCTCGTTGTTTTGAGGAGTTATTTGATTTGGCTAACTCTGATTCCACTTCTGCTTCTCACT TCAATTTCTACACCACAGTTTTTGAGCTATACAATGAAAAGGTAAGGGATCTGCTCCTAGAATCAGAGAACAGTTCACAAAAGGTTCAGATGGGGTCAGC TGAGTTTTCAGTTGAGCTTGAACAACGAAAGGTTGATAACCCATTGGACTTCTCGAGAGTCTTAAAGGCTGCATTCCAGTGCCGCGGAAATGATGCATCC AAGTATAATGTTTCTCACTTGATCGTCACAATACATGTACATTATAACAACATGATCACGGGAGAAAACCTGTACAGCAAGCTTTCACTTGTGGACCTGG CTGGAACGGAAGGTTTGATTACTGAAGAGGAGAGTGGGGAGCGTGTTACAGACTTGCTGCATGTTATGAAGTCACTTTCAGCGTTGGGAGATGTCTTGTC TGCTTTGACAACAAAGAAAGAAGATATTCCTTATGGAAATTCGGTGCTTACGCAAGTTCTTGCCGAATCACTAGGAGGCAGCTCAAAAACTTTGATGATC CTCAATATATGTCCTAACACAACGAACTTGTCGGAGACACTTGCATCACTTAATTTCTGCGCCAGAGCTCGAAATTCTGTACTTACTCTTGGAAATCGAG ATACTATCAAGAAGTGGAGAGATACTGCAAATGATGCAAGGAAGGAGTTATATGAGAAAGAAAAGGAAATTCAGGATTTAAAGCAAGATGTTTTGGGAAA AAGGCAAGCTCTTAAAGATGCAAATGATCAGTGTGTGTTGCTGTTCAACGAAGTTCAGAAGGCCTGGAAAGTTTCTTTCACTTTGCAGTCAGATTTGAAG TCTGAGAATATTACTCTCTCTGACAAACACAAGATAGAAAAAGAACAAAATGCACAGCTCAGAAATCAAGTTGCTCAGCTGTTACATATGGAACAAGAAC AGAAAATCGAGATCCAACAAAAAATTTCTACCATTCAGGAATTGCAGGATAAATTAAAAAGCTTGGAATTACAACATAATGAGGCCCTTCACTCAAAGGA AGCTAGGTCTTTGATTGGCTCAGAGCAGCCAGCGGTATCACCAAATTCTAATACTATTGGCGATGTCATGGATTCTTCTTCTGTTACTAAGAAACTTGAG GAAGAACTCAAAAAGCGTGATGCGCTTATTGAGAGATTGCACGAAGAGAATGAGAAGCTATTTGATAGATTAACTGAGAAAGCCTCTTTAAGTGCATCTC CACAGGTGTCAAGTCCATTACAAAAAGCTGTAGTCAATGCTCACGCTCGCGACCTACAGAGGAATGATGTAAACAAAGGACAGTCTACAGATATTGTCCC TTTACCATTGGCTGCTGCTAAACCTGATGGAACAGTGGCTTTAGTTAAATCTGGCACTGAGATGGTCAAGACAACCCCAGCAGGAGAATATCTTACAGCT GCTCTAAATGATTTTGATCCTGAACAGCAAGACAGCCTTGCTGCAATCTCAGATGGAGCTAATAAGCTTTTGATGTTGGTTCTGGCAGCTGTTATTAAAG CTGGTGCTTCAAGAGAACACGAGATACTTGCTGAAATCAGAGATGCTGTGTTTTCCTTTATCCGTAAACTAGAGCCAAAAAGAGTGATGGATACTATGCT TATTTCTCGTGTTCGCATTTTGTACATAAGATCTTTACTTGCAAGATCACCAGAACTACAATCCATAAAGGTGTCTCCTGTTGAATGCTTTCTGGAAAGA GAAAATACTGGACGAAGTAGAAGCTCGAGCCGTGGCAGTAGTCCTCGAAGATCTCCTGTACGTTATGCAGAAGAACAGATCCAGTGTTTCAAAGTGAATA TAAAGCCAGAAAGAAAGTCTAAGTTTTCATCTGTTGTTTTGAGGATGCGAGGAATTGATCAGGATATTGCGGGAACCCTGGCAACAGAAGAAGCAGAAGA TGCAACACAAGTTGCTAAACTGCGATCAGCTTTGGAGTCTGTTGATCATAAAAGAAGAAAGATATTGCAGCAAATGAAAAGTGATGAAGCGCTTCTAACA TTGGAGAATGGCAGTACGCCTATTCAAAACCCTTCAACAGCTGCTGAGGATGCTCGATTAGCTTCTCTAATTTCCCTGGATAGCATACTGAAGCATGTCA AGGATATTTTGAGACAATCTTCTGTTGAAAGATTGAGTAAAAGCAAGAAGAAAGCGTTGCTATCTTCTGTTGATGAACTTGGGGAGCGGATGCCATCTCT TCTAGGGATTGATCATCCATGCGCACAAAGGCAAATAGCAGATGCTCGCAGCGCAGTTGAGTCAATTCCTGAAGAAGATGACCTTGTTTTCCAGCAAGCA CACGGTAGAAGGCTGTCAACAGATTTTGGGTCCGGGAGTGAAACTGATGTGGCACAGTGGAATGTGCTACAGTTTAATACAGGATCCACATCGCCTTTCA TTATAAAGTGTGGAGCAAACTCAAGTTCAGAACTTGTGATAAAGGCTGATGCACGCGTTCAAGAACCCAAAGGCGGTGAAATAGTGAGAGTGGTTCCAAA ACCATCAGTTCTGGAAAACCTCAACTTGGAGGAAATGAAACAAGTGTTCTCTCAACTCCCCGAGGCGCTAAGCTTGCTAGCTTTGGCAAGGACGGGAGAC GGTACAAGAGCTCGTTATTCTAGACTCTATAGGACGTTAGCCATGAAGGTCCCATCACTAAGGGACCTGGTTAGTGAACTGGAGAAAGGTGGAGTGTTGA AAGATGCCAAGTCTTGA
AA sequence Show only first row Show all	>Lus10035940 pacid=23141068 polypeptide=Lus10035940 locus=Lus10035940.g ID=Lus10035940.BGIv1.0 annot-version=v1.0 MILEGSSHDRGLYARCFEELFDLANSDSTSASHFNFYTTVFELYNEKVRDLLLESENSSQKVQMGSAEFSVELEQRKVDNPLDFSRVLKAAFQCRGNDAS KYNVSHLIVTIHVHYNNMITGENLYSKLSLVDLAGTEGLITEEESGERVTDLLHVMKSLSALGDVLSALTTKKEDIPYGNSVLTQVLAESLGGSSKTLMI LNICPNTTNLSETLASLNFCARARNSVLTLGNRDTIKKWRDTANDARKELYEKEKEIQDLKQDVLGKRQALKDANDQCVLLFNEVQKAWKVSFTLQSDLK SENITLSDKHKIEKEQNAQLRNQVAQLLHMEQEQKIEIQQKISTIQELQDKLKSLELQHNEALHSKEARSLIGSEQPAVSPNSNTIGDVMDSSSVTKKLE EELKKRDALIERLHEENEKLFDRLTEKASLSASPQVSSPLQKAVVNAHARDLQRNDVNKGQSTDIVPLPLAAAKPDGTVALVKSGTEMVKTTPAGEYLTA ALNDFDPEQQDSLAAISDGANKLLMLVLAAVIKAGASREHEILAEIRDAVFSFIRKLEPKRVMDTMLISRVRILYIRSLLARSPELQSIKVSPVECFLER ENTGRSRSSSRGSSPRRSPVRYAEEQIQCFKVNIKPERKSKFSSVVLRMRGIDQDIAGTLATEEAEDATQVAKLRSALESVDHKRRKILQQMKSDEALLT LENGSTPIQNPSTAAEDARLASLISLDSILKHVKDILRQSSVERLSKSKKKALLSSVDELGERMPSLLGIDHPCAQRQIADARSAVESIPEEDDLVFQQA HGRRLSTDFGSGSETDVAQWNVLQFNTGSTSPFIIKCGANSSSELVIKADARVQEPKGGEIVRVVPKPSVLENLNLEEMKQVFSQLPEALSLLALARTGD GTRARYSRLYRTLAMKVPSLRDLVSELEKGGVLKDAKS

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G10470		KAC1, KCA1	KINESIN CDKA;1 ASSOCIATED 1, k...		Lus10035940 [exp]	0	1
AT3G60860			SEC7-like guanine nucleotide e...		Lus10009244 [exp]	1.0	0.9258
AT1G30360		ERD4	early-responsive to dehydratio...		Lus10024894 [exp]	2.4	0.9200
AT4G29900		CIF1, ATACA10, ...	COMPACT INFLORESCENCE 1, autoi...		Lus10001428 [exp]	4.0	0.9060
AT5G43310			COP1-interacting protein-relat...		Lus10011809 [exp]	5.9	0.9118
AT3G61130		GAUT1, LGT1	galacturonosyltransferase 1 (....		Lus10009311 [exp]	6.3	0.8760
AT2G20340			Pyridoxal phosphate (PLP)-depe...		Lus10024966 [exp]	8.8	0.8769
AT5G39420		CDC2CAT	CDC2C (.1)		Lus10030692 [exp]	8.8	0.8959
AT3G50380			Protein of unknown function (D...		Lus10022476 [exp]	10.8	0.9143
AT3G28460			methyltransferases (.1)		Lus10005835 [exp]	11.5	0.8794
AT5G26570		ATGWD3, OK1, PW...	PHOSPHOGLUCAN WATER DIKINASE, ...		Lus10037434 [exp]	12.4	0.8889

Compare expression of checked genes

Lus10035940 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.