Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G22590 426 / 6e-146 UDP-Glycosyltransferase superfamily protein (.1) AT5G49690 345 / 2e-114 UDP-Glycosyltransferase superfamily protein (.1) AT5G65550 328 / 5e-108 UDP-Glycosyltransferase superfamily protein (.1) AT5G54010 196 / 3e-57 UDP-Glycosyltransferase superfamily protein (.1) AT5G54060 196 / 3e-57 UF3GT UDP-glucose:flavonoid 3-o-glucosyltransferase (.1) AT1G64910 193 / 4e-56 UDP-Glycosyltransferase superfamily protein (.1) AT3G29630 187 / 8e-54 UDP-Glycosyltransferase superfamily protein (.1) AT1G64920 186 / 1e-53 UDP-Glycosyltransferase superfamily protein (.1) AT5G53990 184 / 9e-53 UDP-Glycosyltransferase superfamily protein (.1) AT2G22930 183 / 2e-52 UDP-Glycosyltransferase superfamily protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10025711 [exp] 796 / 0 AT2G22590 473 / 2e-164 UDP-Glycosyltransferase superfamily protein (.1) Lus10012726 [exp] 483 / 2e-168 AT2G22590 471 / 3e-164 UDP-Glycosyltransferase superfamily protein (.1) Lus10027850 [exp] 303 / 4e-98 AT5G49690 560 / 0.0 UDP-Glycosyltransferase superfamily protein (.1) Lus10008453 [exp] 209 / 7e-62 AT5G54010 539 / 0.0 UDP-Glycosyltransferase superfamily protein (.1) Lus10042242 [exp] 203 / 2e-61 AT5G65550 280 / 9e-92 UDP-Glycosyltransferase superfamily protein (.1) Lus10003154 [exp] 207 / 5e-61 AT5G54010 318 / 3e-104 UDP-Glycosyltransferase superfamily protein (.1) Lus10043445 [exp] 197 / 2e-57 AT5G65550 225 / 3e-68 UDP-Glycosyltransferase superfamily protein (.1) Lus10004381 [exp] 191 / 5e-55 AT5G54060 437 / 1e-150 UDP-glucose:flavonoid 3-o-glucosyltransferase (.1) Lus10040178 [exp] 188 / 4e-54 AT5G54010 437 / 7e-151 UDP-Glycosyltransferase superfamily protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.001G030600 [exp] 426 / 4e-146 AT2G22590 537 / 0.0 UDP-Glycosyltransferase superfamily protein (.1) Potri.012G034100 [exp] 424 / 2e-145 AT2G22590 505 / 2e-177 UDP-Glycosyltransferase superfamily protein (.1) Potri.010G182575 [exp] 400 / 9e-136 AT5G49690 468 / 7e-163 UDP-Glycosyltransferase superfamily protein (.1) Potri.014G088400 [exp] 348 / 4e-115 AT2G22590 374 / 4e-125 UDP-Glycosyltransferase superfamily protein (.1) Potri.003G184400 [exp] 345 / 2e-114 AT5G49690 549 / 0.0 UDP-Glycosyltransferase superfamily protein (.1) Potri.002G162300 [exp] 333 / 7e-110 AT2G22590 372 / 6e-125 UDP-Glycosyltransferase superfamily protein (.1) Potri.017G042800 [exp] 330 / 7e-109 AT5G49690 377 / 3e-127 UDP-Glycosyltransferase superfamily protein (.1) Potri.010G182650 [exp] 225 / 1e-70 AT5G65550 254 / 4e-82 UDP-Glycosyltransferase superfamily protein (.1) Potri.006G179700 [exp] 220 / 3e-66 AT5G54010 349 / 2e-116 UDP-Glycosyltransferase superfamily protein (.1) Potri.011G097900 [exp] 214 / 5e-64 AT5G54010 498 / 1e-174 UDP-Glycosyltransferase superfamily protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0113 [flax] [poplar] GT-B PF00201 [flax] [poplar] UDPGT UDP-glucoronosyl and UDP-glucosyl transferase
Representative CDS sequence Show only first row Show all	>Lus10035951 pacid=23141209 polypeptide=Lus10035951 locus=Lus10035951.g ID=Lus10035951.BGIv1.0 annot-version=v1.0 ATGGCGAGTACTAATAATAACAAGTCCCTCCACATAGCAATGTTCCCATGGCTTGCCTTCGGTCACATCCTCCCATTCCTGCAACTCGCCAAGCTCATCG CTCAAAGAGGCCACACCATCTCCTTCATTTCCACTCCACGCAACATCGACCGCCTCCCTAAACTCCCTCCCGCTTTATCCTCCCTCATCACATTCGTCAA GCTCCCACTCCCTTCCTCCGACGTCCAAGGTCTCCCTCCCGCCGCCGAGGCCACCTCCGACTTGGAAGCCCGCCACGTCGGCTACCTCAAGAGAGCTTAC GACCTTCTTCAGCACCCACTCTCCACCTTCCTCCAATCTTCTTCATCCCATCCTCCTGATTTCATCATCTGCGACTACGCTCCCTTCTGGCTTCCCGCCG TAGCTCGCCGGTTGGGAATCCCAACTGTGTTTTTCAGCATCTTTATAGCCTCCTCATTAGCCTTCAGCAGCCCCCCCGCCGACGATGAAGACGAAGATTA TCGGAGAGCAGCTGAGGATCTCGCGGAGAAGCCCAGGTGGGTCCCGTTTGAAACCACTTCAGGATACTTCAGGCCTTTCGAAGCTAAGGCATCATTCGAG ATGGTGTTGGTCGGCGGCGGTGGACAGGAATTCCCGGAGATTCACCGTTTCCGACAGATGTTGAGAGGATGCGATTACATTGCAGTCAGGACCTGCCCTG AGCTAGAGTACGATTGGCTTAAGCTTCTGGAACAAATGCACAAGAAGCCCGTTTTCCCCATAGGCGTGCTTCCCAATCCCATCAAGGAAGAAGATGAGAA GGAGGAAGGAGATGAGGACACGTGGAAGTCGATCAAAGAGTGGCTGAACGACGGGAAGGAAAGAGGTTCGGTGGTGTACGTGGCTTTCGGGAGCGAGGCG ATACCCAGCCAGGAAGAGCTGACGGAGATAGCCATCGGGTTGGAGCTTTCCGGGCTGCCTTTCTTCTGGGTGGTCCGGAGCTCTAACGACCACCGTGAGC TCCCCGAAGGGTTCGAGGAGCGGACGGCGGGAAGAGGCGTGGTATGGAAAGGGTGGGCCCCGCAGGTGAAGATTCTGGGACACGAATCGGTAGGGTGCTT GTTCTGTCATTCTGGGTGGAGCTCGGTGGTTGAGGCTCTCCAATTTGGTCACCCACTTGTTTTGCTGACTTTTTACGCTGACCAAGGGCTGAATGCCAAG CTGCTCCAAGAGAAAGGTGTGGGGTACTTGGTTCCGAGGAACGACGATGACGGGCGGTTCAGGAGAGAGTCGGTGGCTGAGTCGCTAAGGGCGGTGATGT TGGCGGAAGAAGAAGAAGGGCAGAGTGGTCATAGAAAGAAAGCTGCGGAGATGCAAACGTTGTTCGCTGACACGGAGAAGCATGAGAGTTATGTCCACGA TTTCCTTAGCAACCTTGTTCAAGCCCTTCCATGA
AA sequence Show only first row Show all	>Lus10035951 pacid=23141209 polypeptide=Lus10035951 locus=Lus10035951.g ID=Lus10035951.BGIv1.0 annot-version=v1.0 MASTNNNKSLHIAMFPWLAFGHILPFLQLAKLIAQRGHTISFISTPRNIDRLPKLPPALSSLITFVKLPLPSSDVQGLPPAAEATSDLEARHVGYLKRAY DLLQHPLSTFLQSSSSHPPDFIICDYAPFWLPAVARRLGIPTVFFSIFIASSLAFSSPPADDEDEDYRRAAEDLAEKPRWVPFETTSGYFRPFEAKASFE MVLVGGGGQEFPEIHRFRQMLRGCDYIAVRTCPELEYDWLKLLEQMHKKPVFPIGVLPNPIKEEDEKEEGDEDTWKSIKEWLNDGKERGSVVYVAFGSEA IPSQEELTEIAIGLELSGLPFFWVVRSSNDHRELPEGFEERTAGRGVVWKGWAPQVKILGHESVGCLFCHSGWSSVVEALQFGHPLVLLTFYADQGLNAK LLQEKGVGYLVPRNDDDGRFRRESVAESLRAVMLAEEEEGQSGHRKKAAEMQTLFADTEKHESYVHDFLSNLVQALP

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G22590			UDP-Glycosyltransferase superf...		Lus10035951 [exp]	0	1
AT5G20950			Glycosyl hydrolase family prot...		Lus10001151 [exp]	1.7	0.9520
AT2G47270	bHLH	bHLH151, UPB1	UPBEAT1, sequence-specific DNA...		Lus10001447 [exp]	3.0	0.9340
AT2G19070		SHT	spermidine hydroxycinnamoyl tr...		Lus10001282 [exp]	7.7	0.9368
AT3G47710	bHLH	BNQ3, PRE4, bHL...	BASIC HELIX-LOOP-HELIX PROTEIN...		Lus10024241 [exp]	7.9	0.9476
AT4G16563			Eukaryotic aspartyl protease f...		Lus10000725 [exp]	8.3	0.9466
AT2G21100			Disease resistance-responsive ...		Lus10034478 [exp]	8.4	0.9355
AT5G57150	bHLH	bHLH035	basic helix-loop-helix (bHLH) ...		Lus10006951 [exp]	8.7	0.9156
AT1G06980			unknown protein		Lus10042244 [exp]	8.9	0.9388
AT1G24430			HXXXD-type acyl-transferase fa...		Lus10025729 [exp]	9.7	0.9207
AT5G18860		NSH3	nucleoside hydrolase 3, inosin...		Lus10041249 [exp]	11.8	0.9243

Compare expression of checked genes

Lus10035951 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.