Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G22610 1282 / 0 Di-glucose binding protein with Kinesin motor domain (.1.2) AT1G72250 699 / 0 Di-glucose binding protein with Kinesin motor domain (.1.2) AT5G27550 507 / 7e-166 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) AT5G27000 347 / 3e-103 KATD, ATK4 KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA D, kinesin 4 (.1) AT2G47500 345 / 9e-103 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.1) AT1G73860 346 / 2e-102 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) AT5G41310 333 / 3e-98 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.1) AT1G18410 336 / 4e-98 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) AT3G44730 333 / 1e-97 AtKIN14h, ATKP1 ARABIDOPSIS KINESIN-LIKE PROTEIN 1, kinesin-like protein 1 (.1) AT1G63640 322 / 2e-93 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.1), P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10025708 [exp] 1960 / 0 AT2G22610 1238 / 0.0 Di-glucose binding protein with Kinesin motor domain (.1.2) Lus10013714 [exp] 692 / 0 AT1G72250 1098 / 0.0 Di-glucose binding protein with Kinesin motor domain (.1.2) Lus10005582 [exp] 692 / 0 AT1G72250 1109 / 0.0 Di-glucose binding protein with Kinesin motor domain (.1.2) Lus10004487 [exp] 474 / 7e-153 AT5G27550 881 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Lus10029914 [exp] 470 / 2e-151 AT5G27550 905 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Lus10029865 [exp] 345 / 3e-102 AT5G27000 1014 / 0.0 KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA D, kinesin 4 (.1) Lus10032897 [exp] 343 / 2e-100 AT3G44730 1302 / 0.0 ARABIDOPSIS KINESIN-LIKE PROTEIN 1, kinesin-like protein 1 (.1) Lus10009851 [exp] 333 / 3e-98 AT2G47500 1245 / 0.0 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.1) Lus10015212 [exp] 327 / 1e-96 AT5G27000 924 / 0.0 KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA D, kinesin 4 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.002G110600 [exp] 1114 / 0 AT2G22610 1057 / 0.0 Di-glucose binding protein with Kinesin motor domain (.1.2) Potri.001G436200 [exp] 724 / 0 AT1G72250 1248 / 0.0 Di-glucose binding protein with Kinesin motor domain (.1.2) Potri.011G140000 [exp] 721 / 0 AT1G72250 1201 / 0.0 Di-glucose binding protein with Kinesin motor domain (.1.2) Potri.005G030271 [exp] 516 / 2e-169 AT5G27550 865 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Potri.013G020700 [exp] 513 / 7e-168 AT5G27550 862 / 0.0 P-loop containing nucleoside triphosphate hydrolases superfamily protein (.1) Potri.013G011500 [exp] 344 / 7e-102 AT5G27000 1081 / 0.0 KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA D, kinesin 4 (.1) Potri.014G125700 [exp] 342 / 3e-101 AT2G47500 1218 / 0.0 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.1) Potri.005G021100 [exp] 341 / 9e-101 AT2G47500 1051 / 0.0 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.1) Potri.002G201000 [exp] 340 / 2e-100 AT2G47500 1237 / 0.0 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain (.1) Potri.001G467600 [exp] 337 / 8e-99 AT3G44730 1266 / 0.0 ARABIDOPSIS KINESIN-LIKE PROTEIN 1, kinesin-like protein 1 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0023 [flax] [poplar] P-loop_NTPase PF00225 [flax] [poplar] Kinesin Kinesin motor domain CL0202 [flax] [poplar] GBD PF11721 [flax] [poplar] Malectin Malectin domain
Representative CDS sequence Show only first row Show all	>Lus10035954 pacid=23141157 polypeptide=Lus10035954 locus=Lus10035954.g ID=Lus10035954.BGIv1.0 annot-version=v1.0 ATGGAAGATCTTCAATTCAGCAACCGGGTCTCGGAAACGGTGCTCTCTGGGTCTTCCTCTTCTTGCTTTCCTCCGATTGGAAACAACGGTGATGCGGGTT ACGGTCCGACAGAATCCGCTTTTGAAGACGCTGATGCTGGGAAATCTTTGGTCGATTCTATGATTTGCGACTCCAATTCAAGGCTCGTTCTTTCTGGGTT TTCAAGATCGAATTGCTCAGAAACAGATGGAGTTTTCATGATCGTAAATAGTGGAAATGAGAGCTCAGTTGAAACAGAGTCCACTCTCAAATTTGTGGGC GACTCTTATTACGAGGGAGGTACTGTTTTGCGGACAGATGAGGATATAGCTGATGCTGGGGATTTCCCATTCATCTACAAGTCTGCGAGGTTCGGGAACT TCTGTTACAGATTTCATGGCCTTCCTTCAGGAGATTATTTCGTCGATCTCCACTTTGCTGAGATTATAAACACTAATGGACCTAAAGGAATACGAGTGTT TGATGTATTCATACATGAAGACAAGGTCCTATCAGAATTTGATATTTTCTCTATCGTTGGAGCCAATAAGCCATTGCAATTGGTCGATGTGAGGGTTTCA GTGAAGGAAGATGGAATACTTTTGTTGAGATTTGAAGGTCTTAGTGGGAGTCCAATGTTGAGTGCAATCTGCATCAGGAAAGCATCTGAAGTGACAGCTA CTCAGCAGCAAAAAGAGTTCCTTAGATGCAATCATTGTGCTTCAGAGATGGAAGTTTCTTCAGCTCAGAAACGGCTTGTGCGAACTAAAGTAACGGATAA GTATGAGAAAAGGATTCAAGACCTCACTGCTCTCTGCCAGCGTAAGACAAATGAATGCCATGAGGCTTGGATGTCACTTACTGCTGCAAATGAGCAGCTG GAGAAAGTCCGCATGGAGCTTGATAACAAGACCTACCAGACCCGGTCTTTAGATCAAACTGTGGGCGAACAAGCTGACAATTTAAGGAATATCACCACCA TGTATGGTCGAGATAAGAAGTCCTGGTCACAAGCGATCAACAACATGCAAGAGAAAATTAGGATTATGAAAGAGGAGCACATTAGGCTTTCTCGTGATGC ACATGGTTGTATTGATTCCATACCCGAGCTGAATAACATGGTGTCTGGAGTTCAGGCATTAGTTGCACAATGTGAGGAACTAAAGTTGAAATATAGTGAA GAACAAGCAAAGAGGAAGCAGTTATATAATCAAATACAAGAGACTAAAGGAAACATCCGAGTTTTTTGCCGTTGTCGGCCATTAAGTAAGGAAGAAGCAT CAACTGGGTATGCAACAGTTGTTGACTTTGATGCCGCGAAGGATGGGGATCTTGGAGTTCTCACAGGCGGCTCCAACAAAAAGATTTTCAAATTTGACAG GGTCTATACCCCTAGAGATGGTCAAGTTGACGTGTTTTCAGATGCCTCACCAATGGTGGTGTCGGTGCTGGATGGTTACAATGTATGCATATTTGCGTAT GGACAAACAGGAACAGGAAAGACATTTACAATGGAGGGGCCTGAGCATAATAGGGGTGTCAATTATAGGACTCTTGAGCAATTGTTCACAGTCGCCCGAG AAAGGAGTGATACTTTCACGTATAACATATCTGTCAGTGTCCTTGAAGTCTACAATGAACAAATTAGGGATCTGTTGACTACATCAACAACATCAAAGAA GTTGGAGATAAAACAAACAGCTGAAGGATCACATCACGTTCCAGGGGTTGTAGAAGCAAAGGTTGATAACATCAAAGATGTTTGGAGTGTACTGCAGGCT GGAAGCAATGCCAGGGCTGTTGGTTCAAACAATGTCAACGAACACAGCAGCCGGTCTCATTGTATGCTGTGCATCATGGTAAAAACAAAAAATCTGATGA ACGGCGAGTGCACGAAAAGCAAACTTTGGCTTGTAGACTTGGCGGGAAGTGAACGATTGGCAAAAACTGATGCACAAGGTGAAAGACTGAAGGAAGCACA AAACATCAACAAATCGCTCTCTGCTCTTGGAGATGTTATATATGCTTTGGCAACTAAGAGCAGTCACATTCCATACAGGAATTCTAAGTTGACACATTTA CTTCAGGACTCTTTAGGAGGCGACTCAAAAACCTTGATGTTCGTTCAAATTAGCCCTTCTGAGCATGACTTGAGCGAGACTCTGAGCTCACTGAATTTCG CAACTCGAGTTCGAGGGGTTGAGCTGGGTCCTCCAAAGAAGCAACTTGATACAAGTGAGATCCAGAGATTGAAAACACTGCTTGAAAAAACAAGGCAAGA ATCTAGATCGAAAGATGAATCACTACGAAAACTTGAAGAGAATTTACAGAACCTGGAGAATAAGACCAGAAGCAAAGACCATGTGTACAAAAGCCAGTTA GAGAAGATACGAGAACTCGAGGGGCAGCTTGAACAGAAAGGTAATTTGCATGGCCAATCAGAGAAGTACGTTTCCCAACTTTCAGAAAGACTGAAAGGGA GAGAAGAAATATGTAACGAATTGCAGCAAAAGGTCAAGGAATTGGAGAGCAAGCTGAAACAAAGAGAGCAATCAGACTCTGAAACTTTTCAACATAAGGT TAGGGAAATGGAGAAGAAAATGAATGAGCAAGCCCAAGAGTCGGAGTCTCAATCCTTCACTCTGCAACAAAAGATTAAGGAGCTAGAAAGCAGACTGCAT GAACAGAATCAAAATTCGGAGGCAGTGGCGCTTCATGTAAAGATTAAGGAGCTAGAAGAAAAGCTGAGGGAGCATGAACAGAAGTTACAGAATAGGCGAG TTAGCAACGCAGTGGATGGCATTAGGGCTAGTCCGACAGGAAAAAATACTTGTGCTAAAGATGATGAACGGATGACAGATGTTGAGGCTAACATCTTAAA GTGTTCAAACTCAATAAACCGTCCCTCGGATGTCAAAGGGTACTCGACGGCAAAGGCTGCTGGTGATGAGGCCCGAAAGAAAAGGCATTCCAGAAATGGA GAAACAGAGAATTGTAATACGCAAGCATGCTTCAATGATTACAGAGGTAGGAAATCAGACCCTCCAAAGATAGCTAGAGTTACCAGTCAAGCGACCTTGA CCCACAAGAGAATCAACAGAGAAACAACAAGACTTGCAATCAAGGACAGGGATCCAAAGAAAAGGACTTGGTGCTAG
AA sequence Show only first row Show all	>Lus10035954 pacid=23141157 polypeptide=Lus10035954 locus=Lus10035954.g ID=Lus10035954.BGIv1.0 annot-version=v1.0 MEDLQFSNRVSETVLSGSSSSCFPPIGNNGDAGYGPTESAFEDADAGKSLVDSMICDSNSRLVLSGFSRSNCSETDGVFMIVNSGNESSVETESTLKFVG DSYYEGGTVLRTDEDIADAGDFPFIYKSARFGNFCYRFHGLPSGDYFVDLHFAEIINTNGPKGIRVFDVFIHEDKVLSEFDIFSIVGANKPLQLVDVRVS VKEDGILLLRFEGLSGSPMLSAICIRKASEVTATQQQKEFLRCNHCASEMEVSSAQKRLVRTKVTDKYEKRIQDLTALCQRKTNECHEAWMSLTAANEQL EKVRMELDNKTYQTRSLDQTVGEQADNLRNITTMYGRDKKSWSQAINNMQEKIRIMKEEHIRLSRDAHGCIDSIPELNNMVSGVQALVAQCEELKLKYSE EQAKRKQLYNQIQETKGNIRVFCRCRPLSKEEASTGYATVVDFDAAKDGDLGVLTGGSNKKIFKFDRVYTPRDGQVDVFSDASPMVVSVLDGYNVCIFAY GQTGTGKTFTMEGPEHNRGVNYRTLEQLFTVARERSDTFTYNISVSVLEVYNEQIRDLLTTSTTSKKLEIKQTAEGSHHVPGVVEAKVDNIKDVWSVLQA GSNARAVGSNNVNEHSSRSHCMLCIMVKTKNLMNGECTKSKLWLVDLAGSERLAKTDAQGERLKEAQNINKSLSALGDVIYALATKSSHIPYRNSKLTHL LQDSLGGDSKTLMFVQISPSEHDLSETLSSLNFATRVRGVELGPPKKQLDTSEIQRLKTLLEKTRQESRSKDESLRKLEENLQNLENKTRSKDHVYKSQL EKIRELEGQLEQKGNLHGQSEKYVSQLSERLKGREEICNELQQKVKELESKLKQREQSDSETFQHKVREMEKKMNEQAQESESQSFTLQQKIKELESRLH EQNQNSEAVALHVKIKELEEKLREHEQKLQNRRVSNAVDGIRASPTGKNTCAKDDERMTDVEANILKCSNSINRPSDVKGYSTAKAAGDEARKKRHSRNG ETENCNTQACFNDYRGRKSDPPKIARVTSQATLTHKRINRETTRLAIKDRDPKKRTWC

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G22610			Di-glucose binding protein wit...		Lus10035954 [exp]	0	1
AT5G60930			P-loop containing nucleoside t...		Lus10000762 [exp]	1.4	0.9810
AT1G71680			Transmembrane amino acid trans...		Lus10036933 [exp]	2.8	0.9717
AT3G21620			ERD (early-responsive to dehyd...		Lus10030024 [exp]	4.9	0.9709
AT1G44110		CYCA1;1	Cyclin A1;1 (.1)		Lus10042739 [exp]	5.5	0.9679
AT5G23910			ATP binding microtubule motor ...		Lus10027488 [exp]	6.0	0.9705
AT1G20060			ATP binding microtubule motor ...		Lus10033133 [exp]	6.0	0.9671
AT2G37420			ATP binding microtubule motor ...		Lus10025304 [exp]	6.3	0.9672
AT2G32590		EMB2795	EMBRYO DEFECTIVE 2795, unknown...		Lus10030028 [exp]	7.0	0.9677
AT1G76310		CYCB2;4	CYCLIN B2;4 (.1)		Lus10016015 [exp]	8.4	0.9638
AT5G51600		ATMAP65-3, PLE	PLEIADE, ARABIDOPSIS THALIANA ...		Lus10015684 [exp]	9.5	0.9683

Compare expression of checked genes

Lus10035954 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.