Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT3G21790 438 / 1e-150 UDP-Glycosyltransferase superfamily protein (.1) AT3G21750 422 / 7e-145 UGT71B1 UDP-glucosyl transferase 71B1 (.1) AT3G21780 420 / 8e-144 UGT71B6 UDP-glucosyl transferase 71B6 (.1) AT3G21760 419 / 2e-143 HYR1 HYPOSTATIN RESISTANCE 1, UDP-Glycosyltransferase superfamily protein (.1) AT3G21800 411 / 3e-140 UGT71B8 UDP-glucosyl transferase 71B8 (.1) AT4G15280 408 / 3e-139 UGT71B5 UDP-glucosyl transferase 71B5 (.1) AT1G07250 370 / 3e-124 UGT71C4 UDP-glucosyl transferase 71C4 (.1) AT4G15260 361 / 2e-122 UDP-Glycosyltransferase superfamily protein (.1) AT2G29710 356 / 9e-119 UDP-Glycosyltransferase superfamily protein (.1) AT1G07260 356 / 1e-118 UGT71C3 UDP-glucosyl transferase 71C3 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10026795 [exp] 801 / 0 AT3G21750 448 / 5e-155 UDP-glucosyl transferase 71B1 (.1) Lus10036086 [exp] 455 / 2e-157 AT3G21760 431 / 2e-147 HYPOSTATIN RESISTANCE 1, UDP-Glycosyltransferase superfamily protein (.1) Lus10036088 [exp] 427 / 3e-146 AT3G21760 377 / 3e-126 HYPOSTATIN RESISTANCE 1, UDP-Glycosyltransferase superfamily protein (.1) Lus10026793 [exp] 409 / 3e-139 AT3G21780 407 / 4e-138 UDP-glucosyl transferase 71B6 (.1) Lus10039037 [exp] 379 / 3e-127 AT1G07250 378 / 8e-127 UDP-glucosyl transferase 71C4 (.1) Lus10010476 [exp] 325 / 2e-106 AT1G07250 342 / 7e-113 UDP-glucosyl transferase 71C4 (.1) Lus10003805 [exp] 322 / 3e-105 AT1G07250 332 / 5e-109 UDP-glucosyl transferase 71C4 (.1) Lus10039301 [exp] 283 / 4e-90 AT3G16520 481 / 9e-168 UDP-glucosyl transferase 88A1 (.1.2.3) Lus10027334 [exp] 248 / 4e-80 AT1G07260 240 / 2e-77 UDP-glucosyl transferase 71C3 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.016G017232 [exp] 492 / 4e-172 AT3G21760 500 / 7e-175 HYPOSTATIN RESISTANCE 1, UDP-Glycosyltransferase superfamily protein (.1) Potri.016G017100 [exp] 492 / 7e-172 AT3G21750 471 / 1e-163 UDP-glucosyl transferase 71B1 (.1) Potri.016G016500 [exp] 483 / 2e-168 AT3G21790 479 / 1e-166 UDP-Glycosyltransferase superfamily protein (.1) Potri.016G016000 [exp] 469 / 6e-163 AT3G21750 456 / 6e-158 UDP-glucosyl transferase 71B1 (.1) Potri.016G017300 [exp] 468 / 2e-162 AT3G21780 477 / 5e-166 UDP-glucosyl transferase 71B6 (.1) Potri.016G017400 [exp] 466 / 7e-162 AT3G21790 474 / 9e-165 UDP-Glycosyltransferase superfamily protein (.1) Potri.006G007600 [exp] 463 / 2e-160 AT3G21760 448 / 3e-154 HYPOSTATIN RESISTANCE 1, UDP-Glycosyltransferase superfamily protein (.1) Potri.006G007400 [exp] 442 / 1e-152 AT3G21790 380 / 9e-128 UDP-Glycosyltransferase superfamily protein (.1) Potri.006G007200 [exp] 440 / 1e-151 AT3G21790 439 / 8e-151 UDP-Glycosyltransferase superfamily protein (.1) Potri.006G007000 [exp] 436 / 8e-150 AT3G21760 449 / 5e-155 HYPOSTATIN RESISTANCE 1, UDP-Glycosyltransferase superfamily protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0113 [flax] [poplar] GT-B PF00201 [flax] [poplar] UDPGT UDP-glucoronosyl and UDP-glucosyl transferase
Representative CDS sequence Show only first row Show all	>Lus10036087 pacid=23141081 polypeptide=Lus10036087 locus=Lus10036087.g ID=Lus10036087.BGIv1.0 annot-version=v1.0 ATGGAAGAGAAGCAGCAGCAGCAGCAGCTGGTATTCATCCCATCTCCAGGCGTTGGCCACCTAGTTTCTATGGTGGAGCTAGCCAAGCTCCTCGTCCACC GCTACTCTACCCTCTCCGTCTCCCTTCTCATCATCACTTCCCCCGCCAACGGCAATCTCACCAGTCGCTACATCGAATCACTTTCTTCTGACTTAACCCC GCAAATCAAGCTCGTCAACCTCCCCCACCTCGATCAACCCTCTAGCTTTCTCTCCATTTTCGAATCTCAAAAGCCAAGAGTCACTGAAGCTGTCTCCGCC TCCCTATCGAATCCCACTTCACCTCGACTCGCCGGGTTCGTCCTCGACATGTTCTGCGCCTCTATGCTGGAAGTCGCCGACGAGTTCAGCGTCCCGTCGT ATATTTTCTTCACATCGGGGGCCGCTTTTCTCGGGTTCATGTTCCGCATACAGTCCTTGCACGACGAGGAAGGGTATGACGTTACAGAGTCCGAGGAAAC TGAGTTGGTCATACCGAGTTACTCCAACCCGGTCCCACGCAAGGTCTTCCCTTCCACCGTTCGGAAAAAGGAGTGGGTGGACGTGCTTTACAAACTGGCA CGAGATTTCAGGAAAACAAAGGGTATTCTCGTCAATACGGTCAAGGAGGTGGAGTCCTACGCTATCGACTCTCTCTCACGCGGTTTAAACCCCAACATCT ATCCGGTGGGGCCCATTCTCAACCTCAAAGGAGACACGTCATCGCCATCAAGCAGCAGTGGAGGCAATGACGTCATTCAGTGGTTAGATGAACAGCCGGA GTCGTCGGTAGTGTTCCTCTGCTTCGGGAGCATGGGAGCATTCGGTGAGGAACAGGTGAAAGAGATAGCCTCTGCCCTGGAGAAAAGCGGGTTAAGGTTT CTTTGGTCCCTCCGTCGACGATCCGAAAAAGAAGCAGGGTGGGTCAGCCCGACAGATTACGACGACGTCAGTGAAGTATTGCCGGAGGGGTTTCTCGACA GGACGGCGGACGTCGGGAAGGTTATAGGATGGGCTCCACAGACAGCGGTGCTAGCCCATAGAGCAGTAGGAGGGTTCGTATCGCACTGTGGATGGAATTC GACGCTGGAGAGTATATGGTTTGGGGTGCCGATGGCGACGTGGCCGATGTACGCGGAGCAGCAGATAAATGCGTTTTTAGTGGTGAAGGAGCTGGGGATG GGCACGGAGATTAAGATGGATTATCGAGTTGAGAGCGGCGATGTTGTTAAAGCCGAAGAAATTGAGAGAGGAATTAGGAGTTTGATGGATAAGGATTGTG GGTTGAAGAAGAAGGTGGAGGAATTGAGGGGTAGGATTAGAGAGGCGTTCGCCGATGGTGGTTCTTCTTCGTCTTCAATCGCTCAATTCATTCAAGATTT GTGA
AA sequence Show only first row Show all	>Lus10036087 pacid=23141081 polypeptide=Lus10036087 locus=Lus10036087.g ID=Lus10036087.BGIv1.0 annot-version=v1.0 MEEKQQQQQLVFIPSPGVGHLVSMVELAKLLVHRYSTLSVSLLIITSPANGNLTSRYIESLSSDLTPQIKLVNLPHLDQPSSFLSIFESQKPRVTEAVSA SLSNPTSPRLAGFVLDMFCASMLEVADEFSVPSYIFFTSGAAFLGFMFRIQSLHDEEGYDVTESEETELVIPSYSNPVPRKVFPSTVRKKEWVDVLYKLA RDFRKTKGILVNTVKEVESYAIDSLSRGLNPNIYPVGPILNLKGDTSSPSSSSGGNDVIQWLDEQPESSVVFLCFGSMGAFGEEQVKEIASALEKSGLRF LWSLRRRSEKEAGWVSPTDYDDVSEVLPEGFLDRTADVGKVIGWAPQTAVLAHRAVGGFVSHCGWNSTLESIWFGVPMATWPMYAEQQINAFLVVKELGM GTEIKMDYRVESGDVVKAEEIERGIRSLMDKDCGLKKKVEELRGRIREAFADGGSSSSSIAQFIQDL

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT3G21790			UDP-Glycosyltransferase superf...		Lus10036087 [exp]	0	1
AT3G02645			Plant protein of unknown funct...		Lus10033668 [exp]	2.0	0.7741
AT3G13110		SAT-M, SAT-A, S...	SERINE ACETYLTRANSFERASE 3, SE...		Lus10016603 [exp]	7.6	0.8090
AT4G16760		ATACX1, ACX1	acyl-CoA oxidase 1 (.1.2)		Lus10007815 [exp]	8.8	0.7477
AT4G25150			HAD superfamily, subfamily III...		Lus10013478 [exp]	13.7	0.7636
AT1G60710		ATB2	NAD(P)-linked oxidoreductase s...		Lus10041272 [exp]	25.7	0.7661
AT3G02130		TOAD2, RPK2, CL...	TOADSTOOL 2, clv3 peptide inse...		Lus10004646 [exp]	26.9	0.7373
AT3G27880			Protein of unknown function (D...		Lus10014541 [exp]	41.5	0.7120
AT4G04770		ABCI8, ATNAP1, ...	LONG AFTER FR, ARABIDOPSIS THA...		Lus10035874 [exp]	53.6	0.7120
AT2G48010		RKF3	receptor-like kinase in in flo...		Lus10042678 [exp]	53.8	0.7066
AT5G16370		AAE5	acyl activating enzyme 5 (.1)		Lus10039161 [exp]	56.2	0.6917

Compare expression of checked genes

Lus10036087 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.