Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G34670 435 / 7e-144 Protein of unknown function (DUF630 and DUF632) (.1), Protein of unknown function (DUF630 and DUF632) (.2) AT3G51290 283 / 7e-85 Protein of unknown function (DUF630) ;Protein of unknown function (DUF632) (.1), Protein of unknown function (DUF630) ;Protein of unknown function (DUF632) (.2) AT1G02110 225 / 5e-64 Protein of unknown function (DUF630 and DUF632) (.1) AT3G60320 194 / 1e-52 Protein of unknown function (DUF630 and DUF632) (.1) AT1G52320 184 / 4e-51 unknown protein AT5G25590 166 / 4e-43 Protein of unknown function (DUF630 and DUF632) (.1) AT1G21740 137 / 2e-33 Protein of unknown function (DUF630 and DUF632) (.1) AT2G27090 125 / 1e-29 Protein of unknown function (DUF630 and DUF632) (.1) AT1G77500 122 / 1e-28 Protein of unknown function (DUF630 and DUF632) (.1) AT4G35240 116 / 1e-26 Protein of unknown function (DUF630 and DUF632) (.1), Protein of unknown function (DUF630 and DUF632) (.2)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10028431 [exp] 289 / 2e-88 AT3G51290 728 / 0.0 Protein of unknown function (DUF630) ;Protein of unknown function (DUF632) (.1), Protein of unknown function (DUF630) ;Protein of unknown function (DUF632) (.2) Lus10041884 [exp] 272 / 5e-84 AT3G51290 649 / 0.0 Protein of unknown function (DUF630) ;Protein of unknown function (DUF632) (.1), Protein of unknown function (DUF630) ;Protein of unknown function (DUF632) (.2) Lus10042910 [exp] 211 / 8e-60 AT3G60320 727 / 0.0 Protein of unknown function (DUF630 and DUF632) (.1) Lus10028207 [exp] 172 / 1e-46 AT3G60320 570 / 0.0 Protein of unknown function (DUF630 and DUF632) (.1) Lus10025777 [exp] 160 / 6e-41 AT1G52320 652 / 0.0 unknown protein Lus10035887 [exp] 158 / 3e-40 AT1G52320 747 / 0.0 unknown protein Lus10022116 [exp] 155 / 2e-39 AT5G25590 753 / 0.0 Protein of unknown function (DUF630 and DUF632) (.1) Lus10037901 [exp] 136 / 4e-34 AT5G25590 627 / 0.0 Protein of unknown function (DUF630 and DUF632) (.1) Lus10042722 [exp] 136 / 2e-33 AT1G21740 659 / 0.0 Protein of unknown function (DUF630 and DUF632) (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.005G112300 [exp] 292 / 1e-89 AT3G51290 576 / 0.0 Protein of unknown function (DUF630) ;Protein of unknown function (DUF632) (.1), Protein of unknown function (DUF630) ;Protein of unknown function (DUF632) (.2) Potri.007G056700 [exp] 268 / 1e-80 AT3G51290 545 / 0.0 Protein of unknown function (DUF630) ;Protein of unknown function (DUF632) (.1), Protein of unknown function (DUF630) ;Protein of unknown function (DUF632) (.2) Potri.014G047400 [exp] 225 / 2e-63 AT3G60320 862 / 0.0 Protein of unknown function (DUF630 and DUF632) (.1) Potri.002G137600 [exp] 217 / 9e-61 AT3G60320 699 / 0.0 Protein of unknown function (DUF630 and DUF632) (.1) Potri.003G054800 [exp] 169 / 2e-44 AT1G52320 626 / 0.0 unknown protein Potri.001G181100 [exp] 167 / 1e-43 AT1G52320 615 / 0.0 unknown protein Potri.018G036400 [exp] 163 / 5e-42 AT5G25590 656 / 0.0 Protein of unknown function (DUF630 and DUF632) (.1) Potri.006G244100 [exp] 160 / 4e-41 AT5G25590 603 / 0.0 Protein of unknown function (DUF630 and DUF632) (.1) Potri.009G137500 [exp] 159 / 7e-41 AT3G51290 228 / 4e-64 Protein of unknown function (DUF630) ;Protein of unknown function (DUF632) (.1), Protein of unknown function (DUF630) ;Protein of unknown function (DUF632) (.2) Potri.004G177200 [exp] 156 / 1e-39 AT1G21740 225 / 2e-62 Protein of unknown function (DUF630 and DUF632) (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF04782 [flax] [poplar] DUF632 Protein of unknown function (DUF632) PF04783 [flax] [poplar] DUF630 Protein of unknown function (DUF630)
Representative CDS sequence Show only first row Show all	>Lus10036155 pacid=23141202 polypeptide=Lus10036155 locus=Lus10036155.g ID=Lus10036155.BGIv1.0 annot-version=v1.0 ATGGGTTGTATTGCATCAAGGATGGAAGAGGAAGAGAGGGTGAGAATATGCAAAGAGAGGAGGAAATTGATGAAAGAGTTGGTTGTATTTAGAGGGGAAT TTGCTGATTCACTAATGAGTTATTTGAGAGCACTGAGGAATACAGGTGTGACCCTTGGACAGTTCACTGAATCTGAGTCCCTAGAGGCTGATCTCACTTG TTGTACATCTTATGGCTTGGCATTGCCTCCATCCCCACCTCTCCCTTTGCCTCCTTCCCCTCCTCCACCACCCCCTTTCAGCCCTGATTCAACCAAGTCT AATGCTTTTTATTCTAACAATAACAACAACAATGTAAACCAACCTCAACAAGAAGTTAGTAACCAAACAGCTCAAATAGAAAGCATTACTACTCCTCCTC CTCCTCCGGAAAGCTCATCATCATCATCATGGAATTATTGGGATCCCTTTGAGCCCAACACTGAAATTGTGGAATCAGCAGCAGTGCAGGAGGAGAGTTG GGCTGAGACCAAGACATACTTTGATGATGATGATGATGATTGCAAACAGGATGAGGAAGTAGCTCCTTGTGATAATACCGTGCTTCCTCGCAGTCAGCAA CAGGATTTGGTTGATGATAATTCCAAAGACACTGCAGATATGGCCATGGTACAGTGCAGGTCCAAGAAAACATTGGAAGCTATTATCAGAGATTTAGATG ACTATTTCCTTAAAGCATCAGCTGGTGGGAATGAAATAGCTGTTCTAATGGACATTTCCAGAGGAGACTCTTCACTTCCTCACAGTTTCAGACAAAATAC AGGGAACAGAAGCGATTCTGCAAAGGTCTTCAGTGCATTGTCATGGAGCAGCTGGTCTTCTAGGTGGTCATTGCAGCGTACTAAAGATGCAGCTGAGCTT TCTAGTACTAGTGAACCTTGCAAACCTGGAGCTCATTGTATCACACTTGAAAAGCTGTATGCTGCAGAGCACAAACTTTACAAGGAAGTGAAGGAGGAAG AAATGACCAAACTGGAATTTCAGAAGAAGTCTATGTTACTGGTAAAACTAGAACAAGAGAATCATGAATGGAACAAGATAGAAAAGATGAGATCAAATGT TGAGGAATTAGAGTCTGAGTTAAGAAGACTGCAACATTCGATAAGTGGGGCATGTTCTTGCATATCAGAACTCATTCATGTGGAACTTTACCCTCAACTT ATTGCATTAGTTTCTGGGCTGAAGAACACGTGGAGGATCATGTATGAATGCCACCAACTTCAGCACCACATCTCCCAACAGTTGAATCACCTCACTGATA ATCAAGGGTTGGAGTCGACTACAGATTTCCATGTACAAGCAACGGCTCAGCTCGAGACCGAGATCACATCCTGGTATCGCAGCTTCTGCAAACTTGTGAA ATCTCAACAAGAATATGTGACAACACTTGGCAGGTGGATCCAGCTGACTAGCTTCCCTGTTGATGGCCAACAACAACAACCAAGTGGTCACTCGATCTAC AATGCAGCACTTCACAAACTTTGTCAAGAATGGATGTGTAGCTTTGACAAATTGCCTGACAAGGTGGCATCGGAGGCCATTAAGGGATTTTTATCCGCCA TCCAATCAATAATGCAGCAACAGTCAGAGGAACTGAGTCTGCAACGTAAATCAGACAAACTGGAGAGAAGGCTGCAGAAAGAACTGATTTCACTGGCTGA ATTGCAGAAGAGACTTGACTGGAGCATTCCTGAAGGAGATGCAACTCCCAATCTGAGTCCTAAGCATCCTTTGTCACTTAAACTCGTCAAAACTGAAGAT TTAAGGAAGAGAGTTGAGGCTGAGAAGGCCAAGTATCTAAACTCAGCCCAGGTTACCCGAGCCATGACACTCAACAACCTTAAAACTAGCCTCCCTCTTG CATTTCAGGCTTTGATGAATTTCTCAAGTGCTTATGCCCAGGCTCTCAAAGCTGTCCAAATCCAGGGGAAGTCACAAGTTGTGTGTAGTAATTCAACTGA AACCTCGATAAAACGAGATTGA
AA sequence Show only first row Show all	>Lus10036155 pacid=23141202 polypeptide=Lus10036155 locus=Lus10036155.g ID=Lus10036155.BGIv1.0 annot-version=v1.0 MGCIASRMEEEERVRICKERRKLMKELVVFRGEFADSLMSYLRALRNTGVTLGQFTESESLEADLTCCTSYGLALPPSPPLPLPPSPPPPPPFSPDSTKS NAFYSNNNNNNVNQPQQEVSNQTAQIESITTPPPPPESSSSSSWNYWDPFEPNTEIVESAAVQEESWAETKTYFDDDDDDCKQDEEVAPCDNTVLPRSQQ QDLVDDNSKDTADMAMVQCRSKKTLEAIIRDLDDYFLKASAGGNEIAVLMDISRGDSSLPHSFRQNTGNRSDSAKVFSALSWSSWSSRWSLQRTKDAAEL SSTSEPCKPGAHCITLEKLYAAEHKLYKEVKEEEMTKLEFQKKSMLLVKLEQENHEWNKIEKMRSNVEELESELRRLQHSISGACSCISELIHVELYPQL IALVSGLKNTWRIMYECHQLQHHISQQLNHLTDNQGLESTTDFHVQATAQLETEITSWYRSFCKLVKSQQEYVTTLGRWIQLTSFPVDGQQQQPSGHSIY NAALHKLCQEWMCSFDKLPDKVASEAIKGFLSAIQSIMQQQSEELSLQRKSDKLERRLQKELISLAELQKRLDWSIPEGDATPNLSPKHPLSLKLVKTED LRKRVEAEKAKYLNSAQVTRAMTLNNLKTSLPLAFQALMNFSSAYAQALKAVQIQGKSQVVCSNSTETSIKRD

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G34670			Protein of unknown function (D...		Lus10036155 [exp]	0	1
AT5G09860		AtTHO1, AtHPR1	nuclear matrix protein-related...		Lus10024130 [exp]	2.0	0.8742
AT3G49000			RNA polymerase III subunit RPC...		Lus10012787 [exp]	6.3	0.8090
AT5G02520			unknown protein		Lus10025814 [exp]	9.7	0.8707
AT3G13670			Protein kinase family protein ...		Lus10042455 [exp]	9.9	0.8214
AT1G63670			Protein of unknown function (D...		Lus10002008 [exp]	10.2	0.8693
AT4G02570		AXR6, ATCUL1	AUXIN RESISTANT 6, cullin 1 (....		Lus10024562 [exp]	10.8	0.8553
AT4G08350		GTA2, GTA02	global transcription factor gr...		Lus10028630 [exp]	10.9	0.8442
AT4G10050			esterase/lipase/thioesterase f...		Lus10041054 [exp]	17.2	0.8552
AT3G27260		GTE8	global transcription factor gr...		Lus10014609 [exp]	19.1	0.8227
AT2G19490			recA DNA recombination family ...		Lus10021585 [exp]	19.4	0.7962

Compare expression of checked genes

Lus10036155 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.