Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G24240 664 / 0 BTB/POZ domain with WD40/YVTN repeat-like protein (.1) AT4G30940 635 / 0 BTB/POZ domain with WD40/YVTN repeat-like protein (.1) AT5G41330 76 / 2e-14 BTB/POZ domain with WD40/YVTN repeat-like protein (.1) AT3G09030 71 / 3e-13 BTB/POZ domain-containing protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10021855 [exp] 798 / 0 AT2G24240 742 / 0.0 BTB/POZ domain with WD40/YVTN repeat-like protein (.1) Lus10017502 [exp] 66 / 2e-11 AT5G41330 546 / 0.0 BTB/POZ domain with WD40/YVTN repeat-like protein (.1) Lus10028780 [exp] 64 / 8e-11 AT5G41330 544 / 0.0 BTB/POZ domain with WD40/YVTN repeat-like protein (.1) Lus10024643 [exp] 62 / 4e-10 AT5G41330 580 / 0.0 BTB/POZ domain with WD40/YVTN repeat-like protein (.1) Lus10032277 [exp] 61 / 1e-09 AT5G41330 574 / 0.0 BTB/POZ domain with WD40/YVTN repeat-like protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.006G185300 [exp] 669 / 0 AT2G24240 773 / 0.0 BTB/POZ domain with WD40/YVTN repeat-like protein (.1) Potri.018G107600 [exp] 664 / 0 AT2G24240 766 / 0.0 BTB/POZ domain with WD40/YVTN repeat-like protein (.1) Potri.001G102300 [exp] 70 / 1e-12 AT5G41330 568 / 0.0 BTB/POZ domain with WD40/YVTN repeat-like protein (.1) Potri.003G129300 [exp] 61 / 6e-10 AT5G41330 579 / 0.0 BTB/POZ domain with WD40/YVTN repeat-like protein (.1) Potri.016G112900 [exp] 61 / 1e-09 AT3G09030 525 / 0.0 BTB/POZ domain-containing protein (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0033 [flax] [poplar] POZ PF02214 [flax] [poplar] BTB_2 BTB/POZ domain
Representative CDS sequence Show only first row Show all	>Lus10036274 pacid=23169309 polypeptide=Lus10036274 locus=Lus10036274.g ID=Lus10036274.BGIv1.0 annot-version=v1.0 ATGATAGTGGGGAAGGACAGAGTCAAATTCAACGTCGGTGGAAGAATCTTCGAGACAACCGCTACCACTTTAGCCAACGCCGGAAGGGACTCCTTCTTCG GCCCTCTCGTCGACGACAACTGGAACTTCAAACCACCGCCACCGGCCGAATTCTTCCCCGATCGGAACCCTGACTGCTTCGCCGTCCTCCTCGATCTCCT CCGCACCAGCGATCTAAACCTCCCGGCGAACGTTCCGGAGCGTCTCCTCCACCGAGAGGCCTCGTTCTACGGCGTTCTTGACCACGTCCGGTCGGCGAAG TGGGGACCCTTCGACGGGAACCGCCTTCGCCACTCGAAATCCGTCGCCGGTAGGGCTCCCGGTGATGGGACGGCGATCCGGGCAGGTCCCGACGGGGGAT GCGCCGTCGCACACGGGAGCGTGGTACACGTGTACGATTGGATGATGGAGGAGCATCCGCCGTTGACCTTGGACTACCAGAGGGTCAACGACGTCGTTTG GGTGGATTCCGATCACCTCGCGATCAGCGCCTGTGAGCGCCTGGGGCGAGGTGACGGCGGGTTGGGTCTTTTTGATAAGACTTCTGGTGAATTGCAGTTC AAGTTCCAGGTTAGTCACGAGAATCAAGTCAAGAGCTTCACCGCCGGAGCTCTGAGTACGACGAATTCCGATTACAGAATCTTCAGTAGTTGTAAAGGGA GGAGTAACGAGTATGGGATTGGAGTTTGGGATCAATGCACCGGTAAACAAATGGATTTCTTCTACGAATCACCAGGTTGGTCATTAGGCGATGCAGACAG GCTGCAGTGGGTGAGTCAAAAAAATTGTCTATTAGTAGCGACATTGTTTCCCAGGAAGGACAATTGCTACATTAGCATGTTGGATTTTCGAAGCAAGGCT ATGGTATGGAGTTGGTCGGACATGGGAGCTCCGTTGATGGTGGACGAAAAGCGGGTTAGAGACGCTATAGCAATGGAAGGAGAAGAGAGTAACAACAACG CTATATGTGTGGTGAATGAGTATGAAGATTTAGGATTTATGGATTTGAGGATGAGTGGTGGAAGCATAAGGTGGAGTTCGAGGAGTAGGCTAATGAAGGG AAGAATGCCTGATGATGAGCCTTGTTATCCTAAGTTGGCATTACACGAGGGGCAATTGTTTTCATCTATGAACGATTGTATCTCAGTGTTTTGTGGTCCC GATATGGTCCTAACATCGAGACTTTGTAGGAGTTATGGTGGGTCGATTTACGATTTTTCAATCGGAGGGGATCACTTATTTGCGCTTCATAGCCAGGAAA ATGTGTTTGATGTTTGGGAGTGTCCTCCGGCACCAGTGATTTGA
AA sequence Show only first row Show all	>Lus10036274 pacid=23169309 polypeptide=Lus10036274 locus=Lus10036274.g ID=Lus10036274.BGIv1.0 annot-version=v1.0 MIVGKDRVKFNVGGRIFETTATTLANAGRDSFFGPLVDDNWNFKPPPPAEFFPDRNPDCFAVLLDLLRTSDLNLPANVPERLLHREASFYGVLDHVRSAK WGPFDGNRLRHSKSVAGRAPGDGTAIRAGPDGGCAVAHGSVVHVYDWMMEEHPPLTLDYQRVNDVVWVDSDHLAISACERLGRGDGGLGLFDKTSGELQF KFQVSHENQVKSFTAGALSTTNSDYRIFSSCKGRSNEYGIGVWDQCTGKQMDFFYESPGWSLGDADRLQWVSQKNCLLVATLFPRKDNCYISMLDFRSKA MVWSWSDMGAPLMVDEKRVRDAIAMEGEESNNNAICVVNEYEDLGFMDLRMSGGSIRWSSRSRLMKGRMPDDEPCYPKLALHEGQLFSSMNDCISVFCGP DMVLTSRLCRSYGGSIYDFSIGGDHLFALHSQENVFDVWECPPAPVI

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G24240			BTB/POZ domain with WD40/YVTN ...		Lus10036274 [exp]	0	1
AT1G44770			unknown protein		Lus10014131 [exp]	2.2	0.9724
AT4G10330			glycine-rich protein (.1)		Lus10001606 [exp]	3.5	0.9658
AT1G10650			SBP (S-ribonuclease binding pr...		Lus10030891 [exp]	5.5	0.9435
AT5G65210	bZIP	TGA1	bZIP transcription factor fami...		Lus10035873 [exp]	6.3	0.9682
AT4G09460	MYB	ATMYB6, ATMYB8	myb domain protein 6 (.1)		Lus10000411 [exp]	8.4	0.9424
AT4G02340			alpha/beta-Hydrolases superfam...		Lus10037577 [exp]	8.7	0.9500
AT3G30390			Transmembrane amino acid trans...		Lus10035140 [exp]	8.7	0.9482
AT4G16520		ATG8F	autophagy 8f, Ubiquitin-like s...		Lus10028933 [exp]	9.2	0.9654
AT4G12840			Protein of unknown function (D...		Lus10041107 [exp]	9.8	0.9432
AT4G27290			S-locus lectin protein kinase ...		Lus10014809 [exp]	11.7	0.9319

Compare expression of checked genes

Lus10036274 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.