Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	No hit found
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10020423 [exp] 51 / 5e-08 ND / Lus10024767 [exp] 41 / 5e-05 ND /
Poplar homologues Show only best Show top 10	No hit found
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10036302 pacid=23169377 polypeptide=Lus10036302 locus=Lus10036302.g ID=Lus10036302.BGIv1.0 annot-version=v1.0 ATGTTGTGTGGATGTCAGATCTACAACTTCTCTTCTCTCAAATTGCAATTTTTCCGTTTCTTCTCCCATTTTCCCCTCCGACGTTCACCCTCTTTCTTCT CCTCATCTGCTTGTCTCCTCTACACCTCCCTCCCTCCACTCCTCCCCTCTCCCCCTCTGCCTCCATTTTCTCCCCTTCCGCCCCTCGCCTCTTCGCCTTT ACCTCTCTCCATCGGCGCCCCACCTAACCGCCCTCCTCCACCTCCGCCCCCACCCAACCGCCCTCTTCCACCTCCGCCTCCACCCAACCTCCACCCAATC CTTTGCCGCGTCACTTTCGCACCCCAACGACGGCCCTCCTCCGATACCGAGACCCAGATACTCACACATGGTGATTGTTTCAGGATGGCTCCTCAGTCTA AAACTACTAAGACAAACAAAAGGGAGAAAGGAGATGATGTTTCTTCCTCAGTTGTAGCTCAACTAGCTTCAGAGGAGTTTCCAAGGGTTCAGCCTCTTTC TCCCTCCCTGCCAACTGAGTGGCTCCACCTAGTTGACTGCTTATATGTCGTCAGTTTTTCCTGTCGCTTGATAACCAAACGAAGGGAAGTTATGGAAGCC CTAACTTACCTTCGGCTTATTAATCACTGA
AA sequence Show only first row Show all	>Lus10036302 pacid=23169377 polypeptide=Lus10036302 locus=Lus10036302.g ID=Lus10036302.BGIv1.0 annot-version=v1.0 MLCGCQIYNFSSLKLQFFRFFSHFPLRRSPSFFSSSACLLYTSLPPLLPSPPLPPFSPLPPLASSPLPLSIGAPPNRPPPPPPPPNRPLPPPPPPNLHPI LCRVTFAPQRRPSSDTETQILTHGDCFRMAPQSKTTKTNKREKGDDVSSSVVAQLASEEFPRVQPLSPSLPTEWLHLVDCLYVVSFSCRLITKRREVMEA LTYLRLINH

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
					Lus10036302 [exp]	0	1
					Lus10001257 [exp]	6.9	0.7554
					Lus10011661 [exp]	13.3	0.7466
AT4G34090			unknown protein		Lus10004995 [exp]	13.5	0.7328
AT1G53050			Protein kinase superfamily pro...		Lus10033684 [exp]	20.4	0.7406
AT5G02290		NAK	Protein kinase superfamily pro...		Lus10023794 [exp]	28.4	0.7356
AT4G02380		SAG21, ATLEA5	Arabidopsis thaliana late embr...		Lus10042672 [exp]	29.4	0.7334
AT3G17670			tetratricopeptide repeat (TPR)...		Lus10007446 [exp]	32.0	0.7268
AT1G09195			unknown protein		Lus10010931 [exp]	38.2	0.6793
AT1G80940			unknown protein		Lus10041624 [exp]	38.5	0.7262
					Lus10009357 [exp]	40.2	0.7071

Compare expression of checked genes

Lus10036302 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.