Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT2G46090 410 / 3e-143 Diacylglycerol kinase family protein (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10007917 [exp] 509 / 0 AT2G46090 453 / 2e-160 Diacylglycerol kinase family protein (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.002G162900 [exp] 465 / 7e-165 AT2G46090 492 / 3e-175 Diacylglycerol kinase family protein (.1) Potri.011G043500 [exp] 46 / 3e-05 AT4G21540 651 / 0.0 sphingosine kinase 1 (.1.2.3)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description CL0240 [flax] [poplar] PFK PF00781 [flax] [poplar] DAGK_cat Diacylglycerol kinase catalytic domain
Representative CDS sequence Show only first row Show all	>Lus10036388 pacid=23174409 polypeptide=Lus10036388 locus=Lus10036388.g ID=Lus10036388.BGIv1.0 annot-version=v1.0 ATGCTCTGCTGCTATCGGATAGCATCGCGAGGAGGAATACTTTCACTATCTTCCTTCTCTTCTCCTTCTCCTTCTTCAATGGCTGTCCCAAATCCGTCAA TCCTGAGAGCCGAGTCTCGTTCCCTGATGTCTTCCTCCTCTGACCTCTCCCTCTTGTCCGCTGCCGACTCTTCCTCTTCTCACCGCCGTGATCTCGTCTT CATCATATGTGAATCGTTGACTACTGGCCCTTATCACGCCATTGATATAACGAGAGAGGCCATTAGAGAAGGTTCTGATGCTGTCATTGCAGTTGGAGGT GATGGTACTTTGCACGAGGTGGTTAATGGATTCTTTTGGGATGGGAAACCTGTTGCCAAACATGATAGAGACGCTTCACATTCAACAGCCCTTGGTCTCA TCCCCTTGGGTACTGGTTCAGATTTTGCCAGAACTTTGGGCTGGAAAAATGATCCTCATGAAGCTATTGATCGGATTGTCAAGGAAGTGGCCTTTTGTGA AGGTTTGAGAACGCCAGTTGATGTCGGTGTTATTGGTGGTCAAGAATCGCATTACTTTATTAATGTTGCTGATATTCATTTGAGTGCAAAGGCTGGTTAC TATGCAGCAAGATACAAAAGATTCGGGAATCTGTGCTATGTTATTGGTGCTCTGCAGGCCTTCATGAGTCACAATAACCAGGACCTCAGAATCAAGGTGA ATGGAGGAGAGTGGGAACCGTGCCCTAAAGTAACAGCATTGTGTATTGGAAATGCAAAATACTTCGGTGGTGGCATGAAAATAACTCCGAATGCCGACCC TACAAATGGAAACTTTGAGATTGTTATCCTCCAAGACTTCAAATGGTATGACTTTATCCTGAAGCTACACAAGCTTTACAACGGCACACATTTATCTGTG CAGAATGTAATCTCCAGAAGAGCGCACTCTATCGAGGTGGAGGACATTTCGGGCGGTGGCAAAATTTTCGTGCAGTCGGACGGCGAGTACTTGGGTTTCC TTCCTAGGAAATTCTGCATTTTACCGTCTGCGATTGAGATGATACGGTGA
AA sequence Show only first row Show all	>Lus10036388 pacid=23174409 polypeptide=Lus10036388 locus=Lus10036388.g ID=Lus10036388.BGIv1.0 annot-version=v1.0 MLCCYRIASRGGILSLSSFSSPSPSSMAVPNPSILRAESRSLMSSSSDLSLLSAADSSSSHRRDLVFIICESLTTGPYHAIDITREAIREGSDAVIAVGG DGTLHEVVNGFFWDGKPVAKHDRDASHSTALGLIPLGTGSDFARTLGWKNDPHEAIDRIVKEVAFCEGLRTPVDVGVIGGQESHYFINVADIHLSAKAGY YAARYKRFGNLCYVIGALQAFMSHNNQDLRIKVNGGEWEPCPKVTALCIGNAKYFGGGMKITPNADPTNGNFEIVILQDFKWYDFILKLHKLYNGTHLSV QNVISRRAHSIEVEDISGGGKIFVQSDGEYLGFLPRKFCILPSAIEMIR

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT2G46090			Diacylglycerol kinase family p...		Lus10036388 [exp]	0	1
AT1G72640			NAD(P)-binding Rossmann-fold s...		Lus10000373 [exp]	1.0	0.9387
AT5G18570		EMB3138, ATOBGL...	EMBRYO DEFECTIVE 3138, EMBRYO ...		Lus10006128 [exp]	2.0	0.8981
AT1G55300		TAF7	TBP-associated factor 7 (.1.2)		Lus10017011 [exp]	4.2	0.8676
AT2G45270		GCP1	glycoprotease 1 (.1)		Lus10000791 [exp]	5.3	0.8820
					Lus10039070 [exp]	5.3	0.8611
AT1G13270		MAP1B, MAP1C	methionine aminopeptidase 1B (...		Lus10021701 [exp]	6.0	0.8876
AT1G55300		TAF7	TBP-associated factor 7 (.1.2)		Lus10021337 [exp]	8.4	0.8529
AT5G44650		Y3IP1, AtCEST	Ycf3-interacting protein 1, Ar...		Lus10038385 [exp]	8.4	0.8782
AT5G11470			bromo-adjacent homology (BAH) ...		Lus10038628 [exp]	10.5	0.8526
AT4G01310			Ribosomal L5P family protein (...		Lus10010251 [exp]	10.6	0.8478

Compare expression of checked genes

Lus10036388 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.