Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT5G64260 264 / 1e-87 EXL2, MSJ1.10 EXORDIUM like 2 (.1) AT4G08950 229 / 4e-74 EXO EXORDIUM, Phosphate-responsive 1 family protein (.1) AT5G09440 204 / 2e-64 EXL4 EXORDIUM like 4 (.1) AT1G35140 192 / 1e-59 EXL1, EXL7, PHI-1 PHOSPHATE-INDUCED 1, EXORDIUM like 1, Phosphate-responsive 1 family protein (.1) AT3G02970 92 / 4e-21 EXL6 EXORDIUM like 6 (.1) AT5G51550 84 / 2e-18 EXL3 EXORDIUM like 3 (.1) AT2G17230 83 / 7e-18 EXL5 EXORDIUM like 5 (.1) AT2G35150 69 / 3e-13 EXL7, EXL1 EXORDIUM LIKE 7, EXORDIUM like 1 (.1)
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10010352 [exp] 418 / 4e-148 AT5G64260 378 / 2e-132 EXORDIUM like 2 (.1) Lus10021370 [exp] 221 / 2e-70 AT4G08950 403 / 1e-141 EXORDIUM, Phosphate-responsive 1 family protein (.1) Lus10017050 [exp] 216 / 8e-69 AT4G08950 404 / 2e-142 EXORDIUM, Phosphate-responsive 1 family protein (.1) Lus10013789 [exp] 149 / 1e-42 AT5G64260 203 / 1e-63 EXORDIUM like 2 (.1) Lus10039143 [exp] 144 / 4e-41 AT5G64260 202 / 1e-63 EXORDIUM like 2 (.1) Lus10026548 [exp] 85 / 2e-18 AT2G17230 499 / 2e-178 EXORDIUM like 5 (.1) Lus10031130 [exp] 84 / 2e-18 AT5G51550 526 / 0.0 EXORDIUM like 3 (.1) Lus10013834 [exp] 80 / 1e-16 AT2G17230 496 / 4e-177 EXORDIUM like 5 (.1) Lus10018314 [exp] 74 / 6e-15 AT2G35150 395 / 5e-138 EXORDIUM LIKE 7, EXORDIUM like 1 (.1)
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.005G163000 [exp] 311 / 2e-106 AT5G64260 379 / 8e-133 EXORDIUM like 2 (.1) Potri.001G311700 [exp] 276 / 2e-92 AT5G64260 444 / 2e-158 EXORDIUM like 2 (.1) Potri.017G051700 [exp] 271 / 1e-90 AT5G64260 439 / 2e-156 EXORDIUM like 2 (.1) Potri.005G163600 [exp] 242 / 6e-79 AT4G08950 438 / 1e-155 EXORDIUM, Phosphate-responsive 1 family protein (.1) Potri.005G163300 [exp] 239 / 9e-78 AT4G08950 436 / 8e-155 EXORDIUM, Phosphate-responsive 1 family protein (.1) Potri.005G163700 [exp] 239 / 9e-78 AT4G08950 431 / 4e-153 EXORDIUM, Phosphate-responsive 1 family protein (.1) Potri.005G163500 [exp] 237 / 5e-77 AT4G08950 430 / 2e-152 EXORDIUM, Phosphate-responsive 1 family protein (.1) Potri.002G098600 [exp] 235 / 3e-76 AT4G08950 404 / 4e-142 EXORDIUM, Phosphate-responsive 1 family protein (.1) Potri.002G098800 [exp] 234 / 1e-75 AT4G08950 430 / 1e-152 EXORDIUM, Phosphate-responsive 1 family protein (.1) Potri.014G126000 [exp] 160 / 7e-47 AT5G64260 240 / 9e-78 EXORDIUM like 2 (.1)
PFAM info	Clan ID Clan name Pfam ID Pfam name Pfam description PF04674 [flax] [poplar] Phi_1 Phosphate-induced protein 1 conserved region
Representative CDS sequence Show only first row Show all	>Lus10036484 pacid=23174497 polypeptide=Lus10036484 locus=Lus10036484.g ID=Lus10036484.BGIv1.0 annot-version=v1.0 ATGGCCTCTTCCCAACGTCCCCAATACTCAATCTTCCTCACCACTCTTCTCTTCCTCTCAACCTTCATCTACCCTTCAGCCGCTGCCGGCGGAAGAAAAC TCGCCGCTCTGGTGAAAGAACAGCCCCTCATCCTCAAATACCACAACGGCCCTTTACTCAAGGGCAACACCACCGTCAACCTCATCTGGTACGGCTCCTT CTCCTCCCCTCAACACGCCATCATCCTCGACTTTCTCCGCTCCCTAACCACCACCTCCTCCTCCGCCTCCGCCGGTTCCGTCGCCTCCTGGTGGCTTACC ACCGCCAGATACTCCGGCGGCCCTTGCAACGTCGTCGTCGGGAGACAGCTCGTCGACGACAAGTGCTCCCTCGGAAAACGCCTCTCCTCCGCCCAGCTGG CCTCCCTCGCGTCTAGAGCCGGCGCCGGCCACGGAAATTCGGTCAACGTGGTGTTGACTTCCGCTGATGTGGCGGTGGACGGGTTTTGCAGCAGGTGCGG GACCCACGGGTCCGGGAAGTTGAAGAACGCCGCTTTACGGTCCCCAGACGCCCCCCTCGCCTCGTTCTCCCCACCGAGATGCAACGGCGATGTCGGGGTC GACGGGATGGTTATCAACTTGGCTACCGTTTTGGCCGGGACGGTGACGAACCCGTTCAACAACGGGTACTTCCAGGGCCCGCCGGAGGCGCCGCTGGAGG CGGTGAGCGCGTGTACTGGGATATTTGGGAAAGGAGCGTACCCTGGATATCCTGGTAATGTCCACGTGGAGAAGACGAGTGGTGCCAGCTATAACGCGAT TGGGATGACTGGGCGTAAGTATCTGCTGCCCGCGATGTGGGACCCGACTACTTCCACGTGTAAGACGCTGCTGTGA
AA sequence Show only first row Show all	>Lus10036484 pacid=23174497 polypeptide=Lus10036484 locus=Lus10036484.g ID=Lus10036484.BGIv1.0 annot-version=v1.0 MASSQRPQYSIFLTTLLFLSTFIYPSAAAGGRKLAALVKEQPLILKYHNGPLLKGNTTVNLIWYGSFSSPQHAIILDFLRSLTTTSSSASAGSVASWWLT TARYSGGPCNVVVGRQLVDDKCSLGKRLSSAQLASLASRAGAGHGNSVNVVLTSADVAVDGFCSRCGTHGSGKLKNAALRSPDAPLASFSPPRCNGDVGV DGMVINLATVLAGTVTNPFNNGYFQGPPEAPLEAVSACTGIFGKGAYPGYPGNVHVEKTSGASYNAIGMTGRKYLLPAMWDPTTSTCKTLL

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT5G64260		EXL2, MSJ1.10	EXORDIUM like 2 (.1)		Lus10036484 [exp]	0	1
AT4G25030			unknown protein		Lus10041414 [exp]	5.3	0.8732
AT4G08230			glycine-rich protein (.1.2)		Lus10024100 [exp]	8.0	0.8467
AT3G11780			MD-2-related lipid recognition...		Lus10013366 [exp]	9.7	0.8560
AT3G52730			ubiquinol-cytochrome C reducta...		Lus10021364 [exp]	12.5	0.8173
AT1G49050			Eukaryotic aspartyl protease f...		Lus10042982 [exp]	12.6	0.8555
AT5G42300		UBL5	ubiquitin-like protein 5 (.1)		Lus10023188 [exp]	13.4	0.8284
AT4G14880		OLD3, CYTACS1, ...	ONSET OF LEAF DEATH 3, O-acety...		Lus10019003 [exp]	13.5	0.7980
AT2G06530		VPS2.1	SNF7 family protein (.1)		Lus10021561 [exp]	14.8	0.8180
AT2G19460			Protein of unknown function (D...		Lus10011939 [exp]	15.2	0.8322
AT5G53560		B5#2, ATB5-A, A...	ARABIDOPSIS CYTOCHROME B5 ISOF...		Lus10005992 [exp]	16.6	0.8436

Compare expression of checked genes

Lus10036484 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.