Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	No hit found
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description
Poplar homologues Show only best Show top 10	No hit found
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10036558 pacid=23174546 polypeptide=Lus10036558 locus=Lus10036558.g ID=Lus10036558.BGIv1.0 annot-version=v1.0 ATGAAGAAGCAGAGTACTGAATCATCCATGTTAGTAATAATGGTTCTGGCATTTGCTTTCTCTGCCTCCTCCAAGTGTTCACTCGCACAAACAGACTTTA ATGGCACCCCTGCGGCCTCCTCCTCCGAAGTTCGACACGCGCCTCTCCCCCCGCCAAACCCACCGTCCATAATCAATCCCCCCCCGCCAGCGGCGATCGA CATCCCTTCTCCAACGGCTCTGCCCCCCACCGTTCTGTCCCCAAGCGAATCAGCCCCTGTTGCCTCCCCGCCGACAATGGTTTCCACGGCGACTCCGTTG CTTTCTCCGACGGCGGCGATGGCCCCTACTGCTACTCCACCGTCGACAGTCGAAGGTCCAAGCGCAAGTGCTTCTCCGGAGGCATCAGTTCCTGCAGGGT CGCCGTCAGAGTCACCGATGGGTGTCCCTTCTTCTGTCAGCAGTCCACCGGCTCCGTCGCTGATGAGTCCAGGAGGGGCGCCGGAGACTGCACCGGGAGA GGCGGGTTCAGGGTCGATCCATGGAGCCAGACTCGTTTTTACTGGGTTTGGAATTTTACCCTTCCTTTTGCTGTAA
AA sequence Show only first row Show all	>Lus10036558 pacid=23174546 polypeptide=Lus10036558 locus=Lus10036558.g ID=Lus10036558.BGIv1.0 annot-version=v1.0 MKKQSTESSMLVIMVLAFAFSASSKCSLAQTDFNGTPAASSSEVRHAPLPPPNPPSIINPPPPAAIDIPSPTALPPTVLSPSESAPVASPPTMVSTATPL LSPTAAMAPTATPPSTVEGPSASASPEASVPAGSPSESPMGVPSSVSSPPAPSLMSPGGAPETAPGEAGSGSIHGARLVFTGFGILPFLLL

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DESeq2's median of ratios [FLAX]

Order by: Tissue Experiment Show only core collection Show again Show schematic diagram

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
					Lus10036558 [exp]	0	1
AT1G09390			GDSL-like Lipase/Acylhydrolase...		Lus10001522 [exp]	3.5	0.8426
AT4G23930			Late embryogenesis abundant (L...		Lus10032397 [exp]	4.9	0.7935
AT2G34510			Protein of unknown function, D...		Lus10023314 [exp]	7.9	0.8027
AT5G67470		ATFH6	ARABIDOPSIS FORMIN HOMOLOG 6, ...		Lus10008739 [exp]	8.8	0.8047
AT2G36885			unknown protein		Lus10026542 [exp]	11.8	0.7818
AT5G55730		FLA1	FASCICLIN-like arabinogalactan...		Lus10016617 [exp]	18.0	0.7920
AT1G56345			Pseudouridine synthase family ...		Lus10020693 [exp]	19.2	0.7470
AT1G32860			Glycosyl hydrolase superfamily...		Lus10033244 [exp]	22.4	0.7827
AT5G67360		ARA12	Subtilase family protein (.1)		Lus10014853 [exp]	25.5	0.7599
AT4G28570			Long-chain fatty alcohol dehyd...		Lus10024922 [exp]	28.1	0.7693

Compare expression of checked genes

Lus10036558 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.