Plant FIBer expression Database

External link	JGI Phytozome v13 [genome browser]
Symbol
Arabidopsis homologues Show only best Show top 10	Locus ID BLAST score/e-value TF class Alias TAIR10 short description AT1G36320 425 / 5e-147 unknown protein AT4G37920 259 / 5e-82 unknown protein
Paralogs Show only best Show top 10	Gene ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Lus10033109 [exp] 802 / 0 AT1G36320 437 / 1e-151 unknown protein Lus10029560 [exp] 254 / 4e-80 AT4G37920 515 / 0.0 unknown protein
Poplar homologues Show only best Show top 10	Locus ID BLAST score/e-value At best hit BLAST score/e-value TAIR10 short description Potri.002G091000 [exp] 500 / 2e-176 AT1G36320 481 / 3e-169 unknown protein Potri.005G170400 [exp] 497 / 2e-175 AT1G36320 469 / 2e-164 unknown protein Potri.007G000400 [exp] 256 / 8e-81 AT4G37920 551 / 0.0 unknown protein
PFAM info
Representative CDS sequence Show only first row Show all	>Lus10036666 pacid=23174493 polypeptide=Lus10036666 locus=Lus10036666.g ID=Lus10036666.BGIv1.0 annot-version=v1.0 ATGGCTGAATTAGCCTCTTCTGCCAAAATTTCGAGTTGTTGCCCTTTATCTTCAACTCCTTCCATGATCAGTCCTCCAGCACAGGCAGCTCCATCTTTCT TTAACTTTGGACCTTCCCCTCAGAATCTCAATACTTCTCCTCACTTCAAAGCGTACTTGGCAGTGAATGCGGCCAGGTCGCAGAGATTCCCTGTGGTTTC TGTTGCTCGTTGTACAGCAACTGTCCCTGGGAATGGTAACGGAGAGAAATTACCATTCTCTGATTCGTCCCAACTTGTTTCTGGCAATGATGAGCCTGAA GAAGCGGGGAAGGAAAAGGAGGATAAAGATATATTGGATCGTGATGATGAAGTTCGAATGTTTCGAGTGTGTGACAAGCTAATTGAAGTCTTCACGGTTG ACGTGCCCTCGCCAACTGATTGGAGAAGGTTGCTCGCGTTTAGCAGGGAATGGGACAGCATCCGGCCTCATTTCTTCAACCGTTGCCATGACCGAGCAGA TGACGAGACTGACCCTGGGAAGAAGCATAATTTACTCAAGCTTTCAAGGAAGCTCAAAGAGGTCGATGAAGATGTGCAACGTCATAATGAACTTCTCGCA GCAATCAGCAAGGTGCCATCCGAGCTATGTGAAATTGTTGCTAGGCGGCGGAAGGATTTCACAGATGAATTTTTTGTACATTTATTTGCTGTGGCACAAT CTTATAACGATGACATAACTGAGCAAAACGCTTTGGAGAAGCTGGGAAATGACTGTTTAGCTGTTGTGCAAGCCTTTGATAGTAAAGCCGAGGAGACGGA AGCATTAACTACTGCAGAGTTGAAGTTGCAAGATATTATCAATTCTCCTTCTTTAGACGCTGCTTGCAGGAAAATAGACAATTTGGCCCAAAAAAATCAA CTTGATTCAGCGTTGGTGTTGATGATCACTAAAGCCTGGTCAGATGCTAAGGAGACCAACATGACTAAAGATGAGGCAAAAGATATACTGTATCATCTGT ATAAGACATCAATGGAAAATATTCAAAGATCGATGCCAAAGGATGTAACAATCGCAAAGCGCCTTCTCACAATTGAAGATCCCAAGGAACGACTATGTGC CTTAAACGATGCATTTAGTCCCCCGGAAAAACTCGAAGAAAACGACGAGGATTGCCTCTACACGACTCCGGAAAAGCTCCAAAGCTGGATGAAGACAGTG GTGGATGCTTACCATCAGAGTGAGGAGGGCACTATGTTGAGGGAAGGTAGGGATCTGATGAACCCTAATACAATCGTAAAGCTGGAGGAACTGATTAAGG TAGTCCAAGATCATTTCATGTGA
AA sequence Show only first row Show all	>Lus10036666 pacid=23174493 polypeptide=Lus10036666 locus=Lus10036666.g ID=Lus10036666.BGIv1.0 annot-version=v1.0 MAELASSAKISSCCPLSSTPSMISPPAQAAPSFFNFGPSPQNLNTSPHFKAYLAVNAARSQRFPVVSVARCTATVPGNGNGEKLPFSDSSQLVSGNDEPE EAGKEKEDKDILDRDDEVRMFRVCDKLIEVFTVDVPSPTDWRRLLAFSREWDSIRPHFFNRCHDRADDETDPGKKHNLLKLSRKLKEVDEDVQRHNELLA AISKVPSELCEIVARRRKDFTDEFFVHLFAVAQSYNDDITEQNALEKLGNDCLAVVQAFDSKAEETEALTTAELKLQDIINSPSLDAACRKIDNLAQKNQ LDSALVLMITKAWSDAKETNMTKDEAKDILYHLYKTSMENIQRSMPKDVTIAKRLLTIEDPKERLCALNDAFSPPEKLEENDEDCLYTTPEKLQSWMKTV VDAYHQSEEGTMLREGRDLMNPNTIVKLEELIKVVQDHFM

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DESeq2's median of ratios [FLAX]

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Coexpressed genes

Compare expression of checked genes Schematic diagram [FLAX] Schematic diagram [POPLAR]

*If you select 4 or less genes and then press "compare expression", expression will be shown as a graph. If you select more than 4 genes, expresion will be shown as a heat map.
*Color represents relative expression level among samples for each gene.

At best	At TF class	At alias	At description		Locus	MR	r	Symbol	HYP	R_s2_CTR	R_s2_Fox	R_s4_CTR	R_s4_Fox	R_r1_CTR	R_r1_Fox	R_r3_CTR	R_r3_Fox	R_r1s2_CTR	R_r1s2_Fox	R_r3s2_CTR	R_r3s2_Fox	R_s6_CTR	R_s6_Al4	R_s6_Al12	R_s6_Al24	R_s8_CTR	R_s8_Al4	R_s8_Al12	R_s8_Al24	R_r5_CTR	R_r5_Al4	R_r5_Al12	R_r5_Al24	R_r7_CTR	R_r7_Al4	R_r7_Al12	R_r7_Al24	LEAF_N	LEAF_P	LEAF_NPK	SAM	AR_Bet	AR_rdf	cPAR	TOP_Bet	TOP_rdf	iFIBa	iFIBb	MID_Bet	MID_rdf	tFIBa	tFIB_Gr	tFIB_Li	tFIB_Bi	tFIBb	tFIBb_PUL8	tFIBb_PUL24	tFIBb_PUL96	tFIBb_OPP8	tFIBb_OPP24	tFIBb_OPP96	sXYLa	sXYLb	sXYLb_PUL8	sXYLb_PUL24	sXYLb_PUL96	sXYLb_OPP8	sXYLb_OPP24	sXYLb_OPP96
AT1G36320			unknown protein		Lus10036666 [exp]	0	1
AT3G17980		AtC2	Arabidopsis thaliana C2 domain...		Lus10009053 [exp]	3.3	0.7494
AT2G36430			Plant protein of unknown funct...		Lus10027720 [exp]	4.9	0.7440
AT2G31800			Integrin-linked protein kinase...		Lus10008350 [exp]	8.8	0.6905
AT5G20700			Protein of unknown function (D...		Lus10022948 [exp]	9.6	0.7247
AT1G13340			Regulator of Vps4 activity in ...		Lus10034303 [exp]	13.0	0.7050
AT1G77810			Galactosyltransferase family p...		Lus10024750 [exp]	14.0	0.6644
AT5G66320	GATA	GATA5	GATA transcription factor 5 (....		Lus10031096 [exp]	15.0	0.6790
AT5G17400		ER-ANT1	endoplasmic reticulum-adenine ...		Lus10017874 [exp]	19.2	0.6610
AT3G62550			Adenine nucleotide alpha hydro...		Lus10010013 [exp]	20.1	0.6630
AT5G43400			Uncharacterised conserved prot...		Lus10041147 [exp]	23.9	0.6575

Compare expression of checked genes

Lus10036666 coexpression network

*The number of genes in the network is adjusted within 50 genes.
*Gene name represents symbol(s) of closest Arabidopsis gene if symbol(s) for the gene itself doesn't exist.
*Circle diameter represents the number of connection with other genes within this network.
*Color for gene name represents subnetwork based on the result of network clustering.